> top > docs > PMC:1472690 > spans > 28548-28788 > annotations

PMC:1472690 / 28548-28788 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T13627 231-239 NN denotes promoter
T13626 226-230 NN denotes IFNγ
T13625 223-225 CC denotes or
T13624 218-222 NN denotes IL-6
T13623 216-217 -COMMA- denotes ,
T13622 211-216 NN denotes IL-1β
T13621 209-210 -COMMA- denotes ,
T13620 205-209 NN denotes TNFα
T13619 201-204 DT denotes the
T13618 198-200 IN denotes of
T13617 190-197 RB denotes instead
T13616 181-189 NN denotes promoter
T13615 174-180 NN denotes IL-1RA
T13614 170-173 CC denotes and
T13613 165-169 NN denotes IL-8
T13612 161-164 DT denotes the
T13611 154-160 IN denotes within
T13610 148-153 NN denotes sites
T13609 140-147 JJ denotes unknown
T13608 136-139 RB denotes now
T13607 133-135 TO denotes to
T13606 130-132 IN denotes up
T13605 126-129 CC denotes and
T13604 120-125 VB denotes known
T13603 117-119 TO denotes to
T13602 112-116 NN denotes NFAT
T13601 108-111 CC denotes and
T13600 101-107 NN denotes NFIL-6
T13599 99-100 -COMMA- denotes ,
T13598 95-99 NN denotes NFκB
T13597 92-94 IN denotes of
T13596 84-91 NN denotes binding
T13595 76-83 VB denotes induced
T13594 69-75 NN denotes TSST-1
T13593 65-68 DT denotes the
T13592 62-64 IN denotes of
T13591 50-61 NN denotes modulations
T13590 38-49 JJ denotes GP-mediated
T13589 35-37 IN denotes by
T13588 28-34 VB denotes caused
T13587 25-27 VB denotes be
T13586 21-24 MD denotes may
T13585 14-20 NN denotes change
T13584 9-13 DT denotes this
T13583 7-8 -COMMA- denotes ,
T13582 3-7 NN denotes part
T13581 0-2 IN denotes In
R8750 T13582 T13581 arg2Of part,In
R8751 T13585 T13584 arg1Of change,this
R8752 T13585 T13586 arg1Of change,may
R8753 T13585 T13587 arg1Of change,be
R8754 T13585 T13588 arg2Of change,caused
R8755 T13588 T13581 arg1Of caused,In
R8756 T13588 T13583 arg1Of caused,","
R8757 T13588 T13586 arg2Of caused,may
R8758 T13588 T13587 arg2Of caused,be
R8759 T13588 T13589 arg1Of caused,by
R8760 T13588 T13606 arg1Of caused,up
R8761 T13589 T13605 arg1Of by,and
R8762 T13591 T13589 arg2Of modulations,by
R8763 T13591 T13590 arg1Of modulations,GP-mediated
R8764 T13591 T13592 arg1Of modulations,of
R8765 T13595 T13594 arg1Of induced,TSST-1
R8766 T13596 T13592 arg2Of binding,of
R8767 T13596 T13593 arg1Of binding,the
R8768 T13596 T13595 arg1Of binding,induced
R8769 T13596 T13597 arg1Of binding,of
R8770 T13596 T13603 arg1Of binding,to
R8771 T13598 T13599 arg1Of NFκB,","
R8772 T13599 T13601 arg1Of ",",and
R8773 T13600 T13599 arg2Of NFIL-6,","
R8774 T13601 T13597 arg2Of and,of
R8775 T13602 T13601 arg2Of NFAT,and
R8776 T13604 T13603 arg2Of known,to
R8777 T13606 T13605 arg2Of up,and
R8778 T13606 T13607 arg1Of up,to
R8779 T13610 T13608 arg1Of sites,now
R8780 T13610 T13609 arg1Of sites,unknown
R8781 T13610 T13611 arg1Of sites,within
R8782 T13610 T13618 arg1Of sites,of
R8783 T13613 T13614 arg1Of IL-8,and
R8784 T13615 T13614 arg2Of IL-1RA,and
R8785 T13616 T13611 arg2Of promoter,within
R8786 T13616 T13612 arg1Of promoter,the
R8787 T13616 T13613 arg1Of promoter,IL-8
R8788 T13616 T13615 arg1Of promoter,IL-1RA
R8789 T13618 T13606 arg2Of of,up
R8790 T13618 T13617 arg1Of of,instead
R8791 T13620 T13621 arg1Of TNFα,","
R8792 T13621 T13623 arg1Of ",",","
R8793 T13622 T13621 arg2Of IL-1β,","
R8794 T13623 T13625 arg1Of ",",or
R8795 T13624 T13623 arg2Of IL-6,","
R8796 T13626 T13625 arg2Of IFNγ,or
R8797 T13627 T13618 arg2Of promoter,of
R8798 T13627 T13619 arg1Of promoter,the
R8799 T13627 T13620 arg1Of promoter,TNFα
R8800 T13627 T13622 arg1Of promoter,IL-1β
R8801 T13627 T13624 arg1Of promoter,IL-6
R8802 T13627 T13626 arg1Of promoter,IFNγ

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T12375 226-230 Protein denotes IFNγ
T12374 218-222 Protein denotes IL-6
T12373 211-216 Protein denotes IL-1β
T12372 205-209 Protein denotes TNFα
T12371 174-180 Protein denotes IL-1RA
T12370 165-169 Protein denotes IL-8
T12369 112-116 Protein denotes NFAT
T12368 101-107 Protein denotes NFIL-6
T12367 69-75 Protein denotes TSST-1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T14312 69-75 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T14300 211-216 http://www.uniprot.org/uniprot/P01584 denotes IL-1β
T14291 205-209 http://www.uniprot.org/uniprot/P01375 denotes TNFα
T14265 174-180 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T14250 165-169 http://www.uniprot.org/uniprot/P10145 denotes IL-8
T14328 218-222 http://www.uniprot.org/uniprot/P05231 denotes IL-6

GO-MF

Id Subject Object Predicate Lexical cue
T12567 218-222 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T12561 165-169 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8
T12539 84-91 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T11873 0-240 Sentence denotes In part, this change may be caused by GP-mediated modulations of the TSST-1 induced binding of NFκB, NFIL-6 and NFAT to known and up to now unknown sites within the IL-8 and IL-1RA promoter instead of the TNFα, IL-1β, IL-6 or IFNγ promoter.
T203 0-240 Sentence denotes In part, this change may be caused by GP-mediated modulations of the TSST-1 induced binding of NFκB, NFIL-6 and NFAT to known and up to now unknown sites within the IL-8 and IL-1RA promoter instead of the TNFα, IL-1β, IL-6 or IFNγ promoter.

simple1

Id Subject Object Predicate Lexical cue
T12754 226-230 Protein denotes IFNγ
T12753 218-222 Protein denotes IL-6
T12752 211-216 Protein denotes IL-1β
T12751 205-209 Protein denotes TNFα
T12750 174-180 Protein denotes IL-1RA
T12749 165-169 Protein denotes IL-8
T12748 112-116 Protein denotes NFAT
T12747 101-107 Protein denotes NFIL-6
T12746 69-75 Protein denotes TSST-1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T16668 84-91 Binding denotes binding
T16667 76-83 Positive_regulation denotes induced
T16592 226-230 Protein denotes IFNγ
T16591 218-222 Protein denotes IL-6
T16590 211-216 Protein denotes IL-1β
T16589 205-209 Protein denotes TNFα
T16588 174-180 Protein denotes IL-1RA
T16587 165-169 Protein denotes IL-8
T16586 112-116 Protein denotes NFAT
T16585 101-107 Protein denotes NFIL-6
T16584 69-75 Protein denotes TSST-1
R11395 T16584 T16667 themeOf TSST-1,induced
R11397 T16585 T16668 themeOf NFIL-6,binding
R11398 T16586 T16668 themeOf NFAT,binding
R11399 T16587 T16668 themeOf IL-8,binding
R11403 T16587 T16668 themeOf IL-8,binding

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T14400 226-230 Protein denotes IFNγ
T14399 218-222 Protein denotes IL-6
T14398 211-216 Protein denotes IL-1β
T14397 205-209 Protein denotes TNFα
T14396 174-180 Protein denotes IL-1RA
T14395 165-169 Protein denotes IL-8
T14394 112-116 Protein denotes NFAT
T14393 101-107 Protein denotes NFIL-6
T14392 69-75 Protein denotes TSST-1
T14480 76-83 Positive_regulation denotes induced
T14479 50-61 Regulation denotes modulations
T14478 84-91 Binding denotes binding
R9500 T14478 T14479 themeOf binding,modulations
R9501 T14478 T14479 themeOf binding,modulations
R9502 T14478 T14479 themeOf binding,modulations
R9503 T14478 T14479 themeOf binding,modulations
R9504 T14478 T14479 themeOf binding,modulations
R9505 T14478 T14479 themeOf binding,modulations
R9507 T14478 T14479 themeOf binding,modulations
R9508 T14478 T14479 themeOf binding,modulations
R9509 T14478 T14479 themeOf binding,modulations
R9510 T14478 T14479 themeOf binding,modulations
R9511 T14478 T14479 themeOf binding,modulations
R9512 T14478 T14479 themeOf binding,modulations
R9513 T14478 T14480 themeOf binding,induced
R9514 T14478 T14480 themeOf binding,induced
R9515 T14478 T14480 themeOf binding,induced
R9516 T14478 T14480 themeOf binding,induced
R9517 T14478 T14480 themeOf binding,induced
R9518 T14478 T14480 themeOf binding,induced
R9519 T14478 T14480 themeOf binding,induced
R9520 T14478 T14480 themeOf binding,induced
R9521 T14478 T14480 themeOf binding,induced
R9522 T14478 T14480 themeOf binding,induced
R9523 T14478 T14480 themeOf binding,induced
R9524 T14478 T14480 themeOf binding,induced
R9552 T14392 T14480 themeOf TSST-1,induced
R9554 T14393 T14478 themeOf NFIL-6,binding
R9556 T14393 T14478 themeOf NFIL-6,binding
R9557 T14393 T14478 themeOf NFIL-6,binding
R9559 T14393 T14478 themeOf NFIL-6,binding
R9561 T14393 T14478 themeOf NFIL-6,binding
R9564 T14393 T14478 themeOf NFIL-6,binding
R9565 T14394 T14478 themeOf NFAT,binding
R9567 T14394 T14478 themeOf NFAT,binding
R9570 T14394 T14478 themeOf NFAT,binding
R9574 T14394 T14478 themeOf NFAT,binding
R9576 T14394 T14478 themeOf NFAT,binding
R9577 T14394 T14478 themeOf NFAT,binding
R9579 T14395 T14478 themeOf IL-8,binding
R9580 T14395 T14478 themeOf IL-8,binding
R9581 T14396 T14478 themeOf IL-1RA,binding
R9584 T14396 T14478 themeOf IL-1RA,binding
R9587 T14397 T14478 themeOf TNFα,binding
R9590 T14397 T14478 themeOf TNFα,binding
R9591 T14398 T14478 themeOf IL-1β,binding
R9592 T14398 T14478 themeOf IL-1β,binding
R9593 T14399 T14478 themeOf IL-6,binding
R9594 T14399 T14478 themeOf IL-6,binding
R9595 T14400 T14478 themeOf IFNγ,binding
R9596 T14400 T14478 themeOf IFNγ,binding

DLUT931

Id Subject Object Predicate Lexical cue
T14659 76-83 Positive_regulation denotes induced
T14658 50-61 Regulation denotes modulations
T14657 84-91 Binding denotes binding
T14575 226-230 Protein denotes IFNγ
T14574 218-222 Protein denotes IL-6
T14573 211-216 Protein denotes IL-1β
T14572 205-209 Protein denotes TNFα
T14571 174-180 Protein denotes IL-1RA
T14570 165-169 Protein denotes IL-8
T14569 112-116 Protein denotes NFAT
T14568 101-107 Protein denotes NFIL-6
T14567 69-75 Protein denotes TSST-1
R9624 T14567 T14659 causeOf TSST-1,induced
R9626 T14568 T14657 themeOf NFIL-6,binding
R9627 T14570 T14657 themeOf IL-8,binding
R9700 T14657 T14658 themeOf binding,modulations
R9701 T14657 T14659 themeOf binding,induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T16887 211-216 Protein denotes IL-1β
T16869 226-230 Protein denotes IFNγ
T16868 95-99 Protein denotes NFκB
T16862 165-169 Protein denotes IL-8
T16860 69-83 Protein denotes TSST-1 induced
T16823 174-180 Protein denotes IL-1RA
T16805 101-107 Protein denotes NFIL-6
T16804 201-239 Entity denotes the TNFα, IL-1β, IL-6 or IFNγ promoter
T16787 136-189 Entity denotes now unknown sites within the IL-8 and IL-1RA promoter
T16759 205-209 Protein denotes TNFα
T16744 112-116 Protein denotes NFAT
T16742 161-189 Entity denotes the IL-8 and IL-1RA promoter
T16701 218-222 Protein denotes IL-6

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T15687 239-240 . denotes .
T15686 231-239 NN denotes promoter
T15685 226-230 NNP denotes IFNγ
T15684 223-225 CC denotes or
T15683 218-222 NNP denotes IL-6
T15682 216-217 , denotes ,
T15681 211-216 NNP denotes IL-1β
T15680 209-210 , denotes ,
T15679 205-209 NNP denotes TNFα
T15678 201-204 DT denotes the
T15677 198-200 IN denotes of
T15676 190-197 RB denotes instead
T15675 181-189 NN denotes promoter
T15674 174-180 NN denotes IL-1RA
T15673 170-173 CC denotes and
T15672 165-169 NN denotes IL-8
T15671 161-164 DT denotes the
T15670 154-160 IN denotes within
T15669 148-153 NNS denotes sites
T15668 140-147 JJ denotes unknown
T15667 136-139 RB denotes now
T15666 133-135 TO denotes to
T15665 130-132 RB denotes up
T15664 126-129 CC denotes and
T15663 120-125 VBN denotes known
T15662 117-119 TO denotes to
T15661 112-116 NNP denotes NFAT
T15660 108-111 CC denotes and
T15659 101-107 NNP denotes NFIL-6
T15658 99-100 , denotes ,
T15657 95-99 NNP denotes NFκB
T15656 92-94 IN denotes of
T15655 84-91 JJ denotes binding
T15654 76-83 JJ denotes induced
T15653 69-75 CD denotes TSST-1
T15652 65-68 DT denotes the
T15651 62-64 IN denotes of
T15650 50-61 NNS denotes modulations
T15649 38-49 JJ denotes GP-mediated
T15648 35-37 IN denotes by
T15647 28-34 VBN denotes caused
T15646 25-27 VB denotes be
T15645 21-24 MD denotes may
T15644 14-20 NN denotes change
T15643 9-13 DT denotes this
T15642 7-8 , denotes ,
T15641 3-7 NN denotes part
T15640 0-2 IN denotes In
R10554 T15648 T15647 agent by,caused
R10565 T15649 T15650 amod GP-mediated,modulations
R10569 T15650 T15648 pobj modulations,by
R10571 T15640 T15647 prep In,caused
R10572 T15641 T15640 pobj part,In
R10573 T15642 T15647 punct ",",caused
R10574 T15651 T15650 prep of,modulations
R10575 T15643 T15644 det this,change
R10576 T15644 T15647 nsubjpass change,caused
R10577 T15652 T15655 det the,binding
R10578 T15645 T15647 aux may,caused
R10579 T15646 T15647 auxpass be,caused
R10580 T15647 T15647 ROOT caused,caused
R10581 T15653 T15654 advmod TSST-1,induced
R10582 T15654 T15655 advmod induced,binding
R10583 T15655 T15651 pobj binding,of
R10585 T15656 T15655 prep of,binding
R10588 T15657 T15656 pobj NFκB,of
R10592 T15658 T15657 punct ",",NFκB
R10596 T15659 T15657 conj NFIL-6,NFκB
R10601 T15660 T15659 cc and,NFIL-6
R10605 T15661 T15659 conj NFAT,NFIL-6
R10609 T15662 T15663 aux to,known
R10615 T15663 T15647 xcomp known,caused
R10620 T15664 T15663 cc and,known
R10624 T15665 T15686 nmod up,promoter
R10628 T15666 T15665 prep to,up
R10632 T15667 T15666 pcomp now,to
R10636 T15668 T15669 amod unknown,sites
R10640 T15669 T15666 pobj sites,to
R10643 T15670 T15669 prep within,sites
R10647 T15671 T15672 det the,IL-8
R10651 T15672 T15670 pobj IL-8,within
R10655 T15673 T15672 cc and,IL-8
R10659 T15674 T15675 compound IL-1RA,promoter
R10660 T15675 T15672 conj promoter,IL-8
R10665 T15676 T15677 advmod instead,of
R10670 T15677 T15669 cc of,sites
R10673 T15678 T15679 det the,TNFα
R10677 T15679 T15669 conj TNFα,sites
R10678 T15680 T15679 punct ",",TNFα
R10681 T15681 T15679 conj IL-1β,TNFα
R10684 T15682 T15681 punct ",",IL-1β
R10688 T15683 T15681 conj IL-6,IL-1β
R10692 T15684 T15683 cc or,IL-6
R10696 T15685 T15683 conj IFNγ,IL-6
R10700 T15686 T15663 conj promoter,known
R10704 T15687 T15647 punct .,caused

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T12441 165-169 Protein denotes IL-8
T12440 112-116 Protein denotes NFAT
T12439 101-107 Protein denotes NFIL-6
T12438 95-99 Protein denotes NFκB
T12437 69-75 Protein denotes TSST-1
T12446 226-239 Protein denotes IFNγ promoter
T12445 218-222 Protein denotes IL-6
T12444 211-216 Protein denotes IL-1β
T12443 205-209 Protein denotes TNFα
T12442 174-189 Protein denotes IL-1RA promoter

testone

Id Subject Object Predicate Lexical cue
T11424 226-230 Protein denotes IFNγ
T11423 218-222 Protein denotes IL-6
T11422 211-216 Protein denotes IL-1β
T11421 205-209 Protein denotes TNFα
T11420 174-180 Protein denotes IL-1RA
T11419 165-169 Protein denotes IL-8
T11418 112-116 Protein denotes NFAT
T11417 101-107 Protein denotes NFIL-6
T11416 69-75 Protein denotes TSST-1
T11514 181-189 Entity denotes promoter
T11513 84-91 Binding denotes binding
T11512 76-83 Positive_regulation denotes induced
R7462 T11417 T11513 themeOf NFIL-6,binding
R7463 T11418 T11513 themeOf NFAT,binding
R7509 T11513 T11512 themeOf binding,induced
R7510 T11514 T11420 partOf promoter,IL-1RA
R7511 T11514 T11513 themeOf promoter,binding

test3

Id Subject Object Predicate Lexical cue
T11773 165-169 Protein denotes IL-8
T11772 112-116 Protein denotes NFAT
T11771 101-107 Protein denotes NFIL-6
T11770 84-91 Binding denotes binding
T11769 76-83 Positive_regulation denotes induced
T11768 69-75 Protein denotes TSST-1
T11767 28-34 Positive_regulation denotes caused
T11627 226-230 Protein denotes IFNγ
T11626 218-222 Protein denotes IL-6
T11625 211-216 Protein denotes IL-1β
T11624 205-209 Protein denotes TNFα
T11623 174-180 Protein denotes IL-1RA
T11622 165-169 Protein denotes IL-8
T11621 112-116 Protein denotes NFAT
T11620 101-107 Protein denotes NFIL-6
T11619 69-75 Protein denotes TSST-1
T11779 226-230 Protein denotes IFNγ
T11778 218-222 Protein denotes IL-6
T11777 211-216 Protein denotes IL-1β
T11776 205-209 Protein denotes TNFα
T11775 181-189 Entity denotes promoter
T11774 174-180 Protein denotes IL-1RA
R7588 T11768 T11769 causeOf TSST-1,induced
R7589 T11770 T11769 themeOf binding,induced
R7590 T11771 T11770 themeOf NFIL-6,binding
R7591 T11772 T11770 themeOf NFAT,binding