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PMC:1472690 / 21768-22054 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T10629 284-285 -RRB- denotes )
T10628 283-284 CD denotes 7
T10627 278-282 NN denotes Fig.
T10626 277-278 -LRB- denotes (
T10625 270-276 NN denotes levels
T10624 262-269 NN denotes protein
T10623 255-261 NN denotes IL-1RA
T10622 251-254 CC denotes and
T10621 246-250 NN denotes mRNA
T10620 239-245 NN denotes IL-1RA
T10619 236-238 IN denotes of
T10618 226-235 NN denotes reduction
T10617 224-225 DT denotes a
T10616 220-223 CC denotes and
T10615 218-219 -COMMA- denotes ,
T10614 213-218 NN denotes sites
T10613 206-212 NN denotes IL-1RA
T10612 202-205 DT denotes the
T10611 199-201 TO denotes to
T10610 191-198 NN denotes factors
T10609 177-190 NN denotes transcription
T10608 173-176 DT denotes the
T10607 170-172 IN denotes of
T10606 161-169 NN denotes activity
T10605 153-160 NN denotes binding
T10604 138-152 JJ denotes down-regulated
T10603 136-137 DT denotes a
T10602 133-135 TO denotes to
T10601 125-132 VB denotes leading
T10600 123-124 -COMMA- denotes ,
T10599 121-123 NN denotes GP
T10598 118-120 IN denotes by
T10597 108-117 VB denotes overruled
T10596 105-107 VB denotes be
T10595 101-104 RB denotes not
T10594 95-100 MD denotes could
T10593 93-94 -RRB- denotes ]
T10592 91-93 CD denotes 36
T10591 90-91 -LRB- denotes [
T10590 86-89 NN denotes CHX
T10589 82-85 IN denotes via
T10588 75-81 NN denotes NFIL-6
T10587 71-74 CC denotes and
T10586 67-70 NN denotes CyA
T10585 63-66 IN denotes via
T10584 58-62 NN denotes NFAT
T10583 56-57 -COMMA- denotes ,
T10582 53-56 NN denotes CyA
T10581 49-52 CC denotes and
T10580 47-48 -RRB- denotes ]
T10579 45-47 CD denotes 35
T10578 44-45 -LRB- denotes [
T10577 39-43 NN denotes CAPE
T10576 35-38 IN denotes via
T10575 30-34 NN denotes NFκB
T10574 27-29 IN denotes of
T10573 16-26 NN denotes inhibition
T10572 13-15 DT denotes an
T10571 11-12 -COMMA- denotes ,
T10570 3-11 VB denotes expected
T10569 0-2 IN denotes As
R6892 T10570 T10569 arg2Of expected,As
R6893 T10573 T10572 arg1Of inhibition,an
R6894 T10573 T10574 arg1Of inhibition,of
R6895 T10573 T10576 arg1Of inhibition,via
R6896 T10573 T10589 arg1Of inhibition,via
R6897 T10573 T10594 arg1Of inhibition,could
R6898 T10573 T10596 arg1Of inhibition,be
R6899 T10573 T10597 arg2Of inhibition,overruled
R6900 T10575 T10574 arg2Of NFκB,of
R6901 T10577 T10578 arg1Of CAPE,[
R6902 T10577 T10581 arg1Of CAPE,and
R6903 T10579 T10578 arg2Of 35,[
R6904 T10580 T10578 arg3Of ],[
R6905 T10581 T10576 arg2Of and,via
R6906 T10582 T10583 arg1Of CyA,","
R6907 T10583 T10581 arg2Of ",",and
R6908 T10583 T10585 arg1Of ",",via
R6909 T10584 T10583 arg2Of NFAT,","
R6910 T10586 T10587 arg1Of CyA,and
R6911 T10587 T10585 arg2Of and,via
R6912 T10588 T10587 arg2Of NFIL-6,and
R6913 T10590 T10589 arg2Of CHX,via
R6914 T10590 T10591 arg1Of CHX,[
R6915 T10592 T10591 arg2Of 36,[
R6916 T10593 T10591 arg3Of ],[
R6917 T10597 T10569 arg1Of overruled,As
R6918 T10597 T10571 arg1Of overruled,","
R6919 T10597 T10594 arg2Of overruled,could
R6920 T10597 T10595 arg1Of overruled,not
R6921 T10597 T10596 arg2Of overruled,be
R6922 T10597 T10600 arg1Of overruled,","
R6923 T10597 T10601 modOf overruled,leading
R6924 T10599 T10597 arg1Of GP,overruled
R6925 T10599 T10598 arg2Of GP,by
R6926 T10601 T10602 arg1Of leading,to
R6927 T10606 T10603 arg1Of activity,a
R6928 T10606 T10604 arg1Of activity,down-regulated
R6929 T10606 T10605 arg1Of activity,binding
R6930 T10606 T10607 arg1Of activity,of
R6931 T10606 T10611 arg1Of activity,to
R6932 T10606 T10616 arg1Of activity,and
R6933 T10610 T10607 arg2Of factors,of
R6934 T10610 T10608 arg1Of factors,the
R6935 T10610 T10609 arg1Of factors,transcription
R6936 T10614 T10611 arg2Of sites,to
R6937 T10614 T10612 arg1Of sites,the
R6938 T10614 T10613 arg1Of sites,IL-1RA
R6939 T10616 T10602 arg2Of and,to
R6940 T10616 T10615 arg1Of and,","
R6941 T10618 T10616 arg2Of reduction,and
R6942 T10618 T10617 arg1Of reduction,a
R6943 T10618 T10619 arg1Of reduction,of
R6944 T10621 T10620 arg1Of mRNA,IL-1RA
R6945 T10621 T10622 arg1Of mRNA,and
R6946 T10622 T10619 arg2Of and,of
R6947 T10625 T10622 arg2Of levels,and
R6948 T10625 T10623 arg1Of levels,IL-1RA
R6949 T10625 T10624 arg1Of levels,protein
R6950 T10625 T10626 arg1Of levels,(
R6951 T10627 T10626 arg2Of Fig.,(
R6952 T10627 T10628 arg1Of Fig.,7
R6953 T10629 T10626 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T10510 255-261 Protein denotes IL-1RA
T10509 239-245 Protein denotes IL-1RA
T10508 206-212 Protein denotes IL-1RA
T10507 75-81 Protein denotes NFIL-6
T10506 58-62 Protein denotes NFAT

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T10785 255-261 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T10784 239-245 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T10783 206-212 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA

GO-BP

Id Subject Object Predicate Lexical cue
T10460 161-198 http://purl.obolibrary.org/obo/GO_0051090 denotes activity of the transcription factors
T10459 161-198 http://purl.obolibrary.org/obo/GO_0006352 denotes activity of the transcription factors
T10458 161-198 http://purl.obolibrary.org/obo/GO_0034246 denotes activity of the transcription factors
T10457 161-198 http://purl.obolibrary.org/obo/GO_0003700 denotes activity of the transcription factors
T10456 161-198 http://purl.obolibrary.org/obo/GO_0001071 denotes activity of the transcription factors
T10455 161-198 http://purl.obolibrary.org/obo/GO_0001070 denotes activity of the transcription factors
T10454 161-198 http://purl.obolibrary.org/obo/GO_0000988 denotes activity of the transcription factors
T10453 161-198 http://purl.obolibrary.org/obo/GO_0051091 denotes activity of the transcription factors
T10451 177-190 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription
T10447 161-198 http://purl.obolibrary.org/obo/GO_0043433 denotes activity of the transcription factors

GO-MF

Id Subject Object Predicate Lexical cue
T10523 161-198 http://purl.obolibrary.org/obo/GO_0034246 denotes activity of the transcription factors
T10522 161-198 http://purl.obolibrary.org/obo/GO_0003700 denotes activity of the transcription factors
T10521 161-198 http://purl.obolibrary.org/obo/GO_0001071 denotes activity of the transcription factors
T10520 161-198 http://purl.obolibrary.org/obo/GO_0001070 denotes activity of the transcription factors
T10519 161-198 http://purl.obolibrary.org/obo/GO_0000988 denotes activity of the transcription factors
T10515 153-160 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

sentences

Id Subject Object Predicate Lexical cue
T10438 0-286 Sentence denotes As expected, an inhibition of NFκB via CAPE [35] and CyA, NFAT via CyA and NFIL-6 via CHX [36] could not be overruled by GP, leading to a down-regulated binding activity of the transcription factors to the IL-1RA sites, and a reduction of IL-1RA mRNA and IL-1RA protein levels (Fig. 7).
T163 0-286 Sentence denotes As expected, an inhibition of NFκB via CAPE [35] and CyA, NFAT via CyA and NFIL-6 via CHX [36] could not be overruled by GP, leading to a down-regulated binding activity of the transcription factors to the IL-1RA sites, and a reduction of IL-1RA mRNA and IL-1RA protein levels (Fig. 7).

simple1

Id Subject Object Predicate Lexical cue
T10531 255-261 Protein denotes IL-1RA
T10530 239-245 Protein denotes IL-1RA
T10529 206-212 Protein denotes IL-1RA
T10528 75-81 Protein denotes NFIL-6
T10527 58-62 Protein denotes NFAT

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T11193 226-235 Negative_regulation denotes reduction
T11185 255-261 Protein denotes IL-1RA
T11184 239-245 Protein denotes IL-1RA
T11183 206-212 Protein denotes IL-1RA
T11182 75-81 Protein denotes NFIL-6
T11181 58-62 Protein denotes NFAT
R7413 T11184 T11193 themeOf IL-1RA,reduction
R7414 T11185 T11193 themeOf IL-1RA,reduction

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T10805 226-235 Negative_regulation denotes reduction
T10797 255-261 Protein denotes IL-1RA
T10796 239-245 Protein denotes IL-1RA
T10795 206-212 Protein denotes IL-1RA
T10794 75-81 Protein denotes NFIL-6
T10793 58-62 Protein denotes NFAT
R7110 T10796 T10805 themeOf IL-1RA,reduction
R7111 T10797 T10805 themeOf IL-1RA,reduction

DLUT931

Id Subject Object Predicate Lexical cue
T10873 226-235 Negative_regulation denotes reduction
T10872 16-26 Negative_regulation denotes inhibition
T10863 255-261 Protein denotes IL-1RA
T10862 239-245 Protein denotes IL-1RA
T10861 206-212 Protein denotes IL-1RA
T10860 75-81 Protein denotes NFIL-6
T10859 58-62 Protein denotes NFAT
R7133 T10859 T10872 themeOf NFAT,inhibition
R7134 T10862 T10873 themeOf IL-1RA,reduction
R7135 T10863 T10873 themeOf IL-1RA,reduction

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T11234 13-57 Negative_regulation denotes an inhibition of NFκB via CAPE [35] and CyA,
T11227 206-212 Protein denotes IL-1RA
T11225 255-276 Protein denotes IL-1RA protein levels
T11223 202-219 Entity denotes the IL-1RA sites,
T11219 239-245 Protein denotes IL-1RA
T11218 278-281 Protein denotes Fig
T11216 27-34 Protein denotes of NFκB
T11205 58-62 Protein denotes NFAT
T11204 75-81 Protein denotes NFIL-6
T11200 239-250 Protein denotes IL-1RA mRNA
T11198 255-261 Protein denotes IL-1RA
R7419 T11216 T11234 themeOf of NFκB,"an inhibition of NFκB via CAPE [35] and CyA,"

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T10939 56-57 , denotes ,
T10938 53-56 NNP denotes CyA
T10937 49-52 CC denotes and
T10936 47-48 NNP denotes ]
T10935 45-47 CD denotes 35
T10934 44-45 NNP denotes [
T10933 39-43 NNP denotes CAPE
T10932 35-38 IN denotes via
T10931 30-34 NNP denotes NFκB
T10930 27-29 IN denotes of
T10929 16-26 NN denotes inhibition
T10928 13-15 DT denotes an
T10927 11-12 , denotes ,
T10926 3-11 VBN denotes expected
T10925 0-2 IN denotes As
T10967 199-201 TO denotes to
T10966 191-198 NNS denotes factors
T10965 177-190 NN denotes transcription
T10964 173-176 DT denotes the
T10963 170-172 IN denotes of
T10962 161-169 NN denotes activity
T10961 153-160 JJ denotes binding
T10960 138-152 JJ denotes down-regulated
T10959 136-137 DT denotes a
T10958 133-135 TO denotes to
T10957 125-132 VBG denotes leading
T10956 123-124 , denotes ,
T10955 121-123 NNP denotes GP
T10954 118-120 IN denotes by
T10953 108-117 VBN denotes overruled
T10952 105-107 VB denotes be
T10951 101-104 RB denotes not
T10950 95-100 MD denotes could
T10949 93-94 NNP denotes ]
T10948 91-93 CD denotes 36
T10947 90-91 NNP denotes [
T10946 86-89 NNP denotes CHX
T10945 82-85 IN denotes via
T10944 75-81 NNP denotes NFIL-6
T10943 71-74 CC denotes and
T10942 67-70 NNP denotes CyA
T10941 63-66 IN denotes via
T10940 58-62 NNP denotes NFAT
T10986 285-286 . denotes .
T10985 284-285 -RRB- denotes )
T10984 283-284 CD denotes 7
T10983 278-282 NN denotes Fig.
T10982 277-278 -LRB- denotes (
T10981 270-276 NNS denotes levels
T10980 262-269 NN denotes protein
T10979 255-261 NNP denotes IL-1RA
T10978 251-254 CC denotes and
T10977 246-250 NNP denotes mRNA
T10976 239-245 NNP denotes IL-1RA
T10975 236-238 IN denotes of
T10974 226-235 NN denotes reduction
T10973 224-225 DT denotes a
T10972 220-223 CC denotes and
T10971 218-219 , denotes ,
T10970 213-218 NNS denotes sites
T10969 206-212 NN denotes IL-1RA
T10968 202-205 DT denotes the
R7177 T10925 T10926 mark As,expected
R7178 T10926 T10953 advcl expected,overruled
R7179 T10927 T10953 punct ",",overruled
R7180 T10928 T10929 det an,inhibition
R7181 T10929 T10953 nsubjpass inhibition,overruled
R7182 T10930 T10929 prep of,inhibition
R7183 T10931 T10930 pobj NFκB,of
R7184 T10932 T10929 prep via,inhibition
R7185 T10933 T10934 compound CAPE,[
R7186 T10934 T10932 pobj [,via
R7187 T10935 T10936 nummod 35,]
R7188 T10936 T10934 conj ],[
R7189 T10937 T10936 cc and,]
R7190 T10938 T10936 conj CyA,]
R7191 T10939 T10938 punct ",",CyA
R7192 T10940 T10938 conj NFAT,CyA
R7193 T10941 T10934 prep via,[
R7194 T10942 T10941 pobj CyA,via
R7195 T10943 T10942 cc and,CyA
R7196 T10944 T10942 conj NFIL-6,CyA
R7197 T10945 T10929 prep via,inhibition
R7198 T10946 T10947 compound CHX,[
R7199 T10947 T10945 pobj [,via
R7200 T10948 T10949 nummod 36,]
R7201 T10949 T10953 nsubjpass ],overruled
R7202 T10950 T10953 aux could,overruled
R7203 T10951 T10953 neg not,overruled
R7204 T10952 T10953 auxpass be,overruled
R7205 T10953 T10953 ROOT overruled,overruled
R7206 T10954 T10953 agent by,overruled
R7207 T10955 T10954 pobj GP,by
R7208 T10956 T10953 punct ",",overruled
R7209 T10957 T10953 advcl leading,overruled
R7210 T10958 T10957 prep to,leading
R7211 T10959 T10962 det a,activity
R7212 T10960 T10962 amod down-regulated,activity
R7213 T10961 T10962 amod binding,activity
R7214 T10962 T10958 pobj activity,to
R7215 T10963 T10962 prep of,activity
R7216 T10964 T10966 det the,factors
R7217 T10965 T10966 compound transcription,factors
R7218 T10966 T10963 pobj factors,of
R7219 T10967 T10962 prep to,activity
R7220 T10968 T10970 det the,sites
R7221 T10969 T10970 compound IL-1RA,sites
R7222 T10970 T10967 pobj sites,to
R7223 T10971 T10957 punct ",",leading
R7224 T10972 T10953 cc and,overruled
R7225 T10973 T10974 det a,reduction
R7226 T10974 T10953 conj reduction,overruled
R7227 T10975 T10974 prep of,reduction
R7228 T10976 T10977 compound IL-1RA,mRNA
R7229 T10977 T10981 nmod mRNA,levels
R7230 T10978 T10977 cc and,mRNA
R7231 T10979 T10977 conj IL-1RA,mRNA
R7232 T10980 T10981 compound protein,levels
R7233 T10981 T10975 pobj levels,of
R7234 T10982 T10981 punct (,levels
R7235 T10983 T10981 appos Fig.,levels
R7236 T10984 T10983 nummod 7,Fig.
R7237 T10985 T10983 punct ),Fig.
R7238 T10986 T10953 punct .,overruled

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T10831 75-81 Protein denotes NFIL-6
T10830 58-70 Protein denotes NFAT via CyA
T10829 39-56 Protein denotes CAPE [35] and CyA
T10828 30-34 Protein denotes NFκB
T10837 226-235 Negative_regulation denotes reduction
T10836 226-235 Negative_regulation denotes reduction
T10835 16-26 Negative_regulation denotes inhibition
T10834 16-26 Negative_regulation denotes inhibition
T10833 255-269 Protein denotes IL-1RA protein
T10832 239-250 Protein denotes IL-1RA mRNA
R7119 T10828 T10834 themeOf NFκB,inhibition
R7120 T10829 T10835 themeOf CAPE [35] and CyA,inhibition
R7121 T10832 T10836 themeOf IL-1RA mRNA,reduction
R7122 T10833 T10837 themeOf IL-1RA protein,reduction

testone

Id Subject Object Predicate Lexical cue
T10388 226-235 Negative_regulation denotes reduction
T10387 213-218 Entity denotes sites
T10386 153-160 Binding denotes binding
T10385 138-152 Negative_regulation denotes down-regulated
T10384 108-117 Negative_regulation denotes overruled
T10383 63-66 Positive_regulation denotes via
T10375 255-261 Protein denotes IL-1RA
T10374 239-245 Protein denotes IL-1RA
T10373 206-212 Protein denotes IL-1RA
T10372 75-81 Protein denotes NFIL-6
T10371 58-62 Protein denotes NFAT
R6806 T10372 T10383 causeOf NFIL-6,via
R6807 T10374 T10388 themeOf IL-1RA,reduction
R6810 T10386 T10385 themeOf binding,down-regulated

test3

Id Subject Object Predicate Lexical cue
T10423 255-261 Protein denotes IL-1RA
T10422 239-245 Protein denotes IL-1RA
T10421 226-235 Negative_regulation denotes reduction
T10420 206-212 Protein denotes IL-1RA
T10419 153-160 Binding denotes binding
T10418 138-152 Negative_regulation denotes down-regulated
T10417 108-117 Negative_regulation denotes overruled
T10416 82-85 Positive_regulation denotes via
T10415 75-81 Protein denotes NFIL-6
T10414 63-66 Positive_regulation denotes via
T10413 58-62 Protein denotes NFAT
T10403 255-261 Protein denotes IL-1RA
T10402 239-245 Protein denotes IL-1RA
T10401 206-212 Protein denotes IL-1RA
T10400 75-81 Protein denotes NFIL-6
T10399 58-62 Protein denotes NFAT
R6816 T10415 T10414 causeOf NFIL-6,via
R6817 T10419 T10418 themeOf binding,down-regulated
R6818 T10422 T10421 themeOf IL-1RA,reduction
R6819 T10423 T10421 themeOf IL-1RA,reduction