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PMC:1472690 / 18883-19656 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T24436 771-772 -RRB- denotes )
T24435 765-771 NN denotes TSST-1
T24434 763-764 SYM denotes +
T24433 760-762 NN denotes GP
T24432 758-759 -COLON- denotes :
T24431 757-758 CD denotes 7
T24430 752-756 NN denotes lane
T24429 750-751 -COLON- denotes ;
T24428 747-750 NN denotes LPS
T24427 745-746 CC denotes +
T24426 742-744 NN denotes GP
T24425 740-741 -COLON- denotes :
T24424 739-740 CD denotes 6
T24423 734-738 NN denotes lane
T24422 732-733 -COMMA- denotes ,
T24421 726-732 NN denotes TSST-1
T24420 724-725 -COLON- denotes :
T24419 723-724 CD denotes 5
T24418 718-722 NN denotes lane
T24417 716-717 -COLON- denotes ;
T24416 713-716 NN denotes LPS
T24415 711-712 -COLON- denotes :
T24414 710-711 CD denotes 4
T24413 705-709 NN denotes lane
T24412 703-704 -COLON- denotes ;
T24411 701-703 NN denotes GP
T24410 699-700 -COLON- denotes :
T24409 698-699 CD denotes 3
T24408 693-697 NN denotes lane
T24407 691-692 -COLON- denotes ;
T24406 684-691 NN denotes control
T24405 677-683 NN denotes medium
T24404 675-676 -COLON- denotes :
T24403 674-675 CD denotes 2
T24402 669-673 NN denotes lane
T24401 667-668 -COLON- denotes ;
T24400 662-667 NN denotes water
T24399 660-661 -COLON- denotes :
T24398 659-660 CD denotes 1
T24397 654-658 NN denotes lane
T24396 653-654 -LRB- denotes (
T24395 647-652 NN denotes panel
T24394 641-646 JJ denotes lower
T24393 637-640 DT denotes the
T24392 634-636 IN denotes in
T24391 628-633 VB denotes shown
T24390 625-627 VB denotes is
T24389 614-624 NN denotes experiment
T24388 599-613 JJ denotes representative
T24387 597-598 DT denotes a
T24386 594-596 IN denotes of
T24385 580-593 NN denotes autoradiogram
T24384 577-579 DT denotes An
T24383 574-575 -RRB- denotes )
T24382 573-574 CD denotes 6
T24381 571-572 JJ denotes =
T24380 569-570 NN denotes n
T24379 568-569 -LRB- denotes (
T24378 564-567 NN denotes SEM
T24377 562-563 CC denotes ±
T24376 560-561 CD denotes 1
T24375 557-559 TO denotes to
T24374 551-556 JJ denotes equal
T24373 547-550 VB denotes set
T24372 542-546 VB denotes were
T24371 535-541 NN denotes levels
T24370 527-534 NN denotes control
T24369 520-526 NN denotes Medium
T24368 513-518 VB denotes added
T24367 509-512 VB denotes are
T24366 503-508 NN denotes calc.
T24365 493-502 NN denotes GP/TSST-1
T24364 489-492 CC denotes and
T24363 483-488 NN denotes calc.
T24362 476-482 NN denotes GP/LPS
T24361 472-475 IN denotes for
T24360 465-471 NN denotes values
T24359 453-464 JJ denotes theoretical
T24358 449-452 DT denotes the
T24357 439-448 VB denotes depicting
T24356 434-438 NN denotes Bars
T24355 424-432 NN denotes promoter
T24354 417-423 NN denotes IL-1RA
T24353 413-416 DT denotes the
T24352 410-412 IN denotes in
T24351 405-409 NN denotes site
T24350 401-404 DT denotes the
T24349 398-400 TO denotes to
T24348 389-397 NN denotes activity
T24347 381-388 NN denotes binding
T24346 372-380 NN denotes NFAT-DNA
T24345 363-371 JJ denotes elevated
T24344 359-362 DT denotes the
T24343 356-358 IN denotes of
T24342 341-355 NN denotes representation
T24341 331-340 NNP denotes Schematic
T24340 325-330 NNP denotes 37°C.
T24339 322-324 IN denotes at
T24338 320-321 NN denotes h
T24337 318-319 CD denotes 1
T24336 314-317 IN denotes for
T24335 310-313 NN denotes LPS
T24334 308-309 SYM denotes +
T24333 305-307 NN denotes GP
T24332 301-304 CC denotes and
T24331 294-300 NN denotes TSST-1
T24330 292-293 SYM denotes +
T24329 289-291 NN denotes GP
T24328 287-288 -COMMA- denotes ,
T24327 285-287 NN denotes GP
T24326 283-284 -COMMA- denotes ,
T24325 277-283 NN denotes TSST-1
T24324 275-276 -COMMA- denotes ,
T24323 272-275 NN denotes LPS
T24322 270-271 -COMMA- denotes ,
T24321 263-270 NN denotes control
T24320 256-262 NN denotes medium
T24319 251-255 IN denotes with
T24318 241-250 VB denotes incubated
T24317 236-240 VB denotes were
T24316 231-235 NN denotes PBMC
T24315 225-230 JJ denotes Human
T24314 222-223 -RRB- denotes )
T24313 218-222 CD denotes 0.05
T24300 174-180 JJ denotes latter
T24299 170-173 DT denotes the
T24298 167-169 IN denotes in
T24297 165-166 -COMMA- denotes ,
T24296 162-165 CC denotes and
T24295 159-161 NN denotes GP
T24294 156-158 TO denotes to
T24293 147-155 VB denotes compared
T24292 142-146 WRB denotes when
T24291 140-141 -COMMA- denotes ,
T24290 134-140 NN denotes TSST-1
T24289 132-133 SYM denotes +
T24288 129-131 NN denotes GP
T24287 125-128 CC denotes and
T24286 121-124 NN denotes LPS
T24285 119-120 SYM denotes +
T24284 116-118 NN denotes GP
T24283 112-115 IN denotes for
T24282 99-111 VB denotes up-regulated
T24281 95-98 VB denotes was
T24280 87-94 NN denotes Binding
T24279 77-85 NN denotes promoter
T24278 70-76 NN denotes IL-1RA
T24277 66-69 DT denotes the
T24276 63-65 IN denotes in
T24275 58-62 NN denotes site
T24274 49-57 NN denotes NFATP2/3
T24273 45-48 JJ denotes new
T24272 43-44 DT denotes a
T24271 40-42 TO denotes to
T24270 32-39 NN denotes binding
T24269 28-31 NN denotes DNA
T24268 13-27 JJ denotes TSST-1-induced
T24267 3-12 VB denotes modulated
T24266 0-2 NN denotes GP
T24312 216-217 SYM denotes <
T24311 214-215 NN denotes p
T24310 212-213 SYM denotes =
T24309 210-211 SYM denotes *
T24308 209-210 -LRB- denotes (
T24307 202-208 NN denotes TSST-1
T24306 198-201 CC denotes and
T24305 195-197 NN denotes GP
T24304 190-194 CC denotes both
T24303 187-189 TO denotes to
T24302 185-186 -COMMA- denotes ,
T24301 181-185 NN denotes case
R16477 T24266 T24267 arg1Of GP,modulated
R16478 T24270 T24267 arg2Of binding,modulated
R16479 T24270 T24268 arg1Of binding,TSST-1-induced
R16480 T24270 T24269 arg1Of binding,DNA
R16481 T24270 T24271 arg1Of binding,to
R16482 T24275 T24271 arg2Of site,to
R16483 T24275 T24272 arg1Of site,a
R16484 T24275 T24273 arg1Of site,new
R16485 T24275 T24274 arg1Of site,NFATP2/3
R16486 T24275 T24276 arg1Of site,in
R16487 T24279 T24276 arg2Of promoter,in
R16488 T24279 T24277 arg1Of promoter,the
R16489 T24279 T24278 arg1Of promoter,IL-1RA
R16490 T24280 T24281 arg1Of Binding,was
R16491 T24280 T24282 arg2Of Binding,up-regulated
R16492 T24282 T24281 arg2Of up-regulated,was
R16493 T24282 T24283 arg1Of up-regulated,for
R16494 T24282 T24291 arg1Of up-regulated,","
R16495 T24282 T24292 arg1Of up-regulated,when
R16496 T24286 T24284 arg1Of LPS,GP
R16497 T24286 T24285 arg1Of LPS,+
R16498 T24286 T24287 arg1Of LPS,and
R16499 T24287 T24283 arg2Of and,for
R16500 T24290 T24287 arg2Of TSST-1,and
R16501 T24290 T24288 arg1Of TSST-1,GP
R16502 T24290 T24289 arg1Of TSST-1,+
R16503 T24293 T24292 arg2Of compared,when
R16504 T24293 T24294 arg1Of compared,to
R16505 T24293 T24298 arg1Of compared,in
R16506 T24293 T24302 arg1Of compared,","
R16507 T24293 T24303 arg1Of compared,to
R16508 T24294 T24296 arg1Of to,and
R16509 T24294 T24297 arg1Of to,","
R16510 T24295 T24294 arg2Of GP,to
R16511 T24298 T24297 arg2Of in,","
R16512 T24301 T24298 arg2Of case,in
R16513 T24301 T24299 arg1Of case,the
R16514 T24301 T24300 arg1Of case,latter
R16515 T24305 T24306 arg1Of GP,and
R16516 T24306 T24303 arg2Of and,to
R16517 T24306 T24304 arg1Of and,both
R16518 T24306 T24308 arg1Of and,(
R16519 T24307 T24306 arg2Of TSST-1,and
R16520 T24311 T24308 arg2Of p,(
R16521 T24311 T24309 arg1Of p,*
R16522 T24311 T24310 arg1Of p,=
R16523 T24311 T24312 arg1Of p,<
R16524 T24311 T24313 arg1Of p,0.05
R16525 T24314 T24308 arg3Of ),(
R16526 T24316 T24315 arg1Of PBMC,Human
R16527 T24316 T24317 arg1Of PBMC,were
R16528 T24316 T24318 arg2Of PBMC,incubated
R16529 T24318 T24317 arg2Of incubated,were
R16530 T24318 T24319 arg1Of incubated,with
R16531 T24321 T24320 arg1Of control,medium
R16532 T24321 T24322 arg1Of control,","
R16533 T24322 T24324 arg1Of ",",","
R16534 T24323 T24322 arg2Of LPS,","
R16535 T24324 T24326 arg1Of ",",","
R16536 T24325 T24324 arg2Of TSST-1,","
R16537 T24326 T24328 arg1Of ",",","
R16538 T24327 T24326 arg2Of GP,","
R16539 T24328 T24332 arg1Of ",",and
R16540 T24331 T24328 arg2Of TSST-1,","
R16541 T24331 T24329 arg1Of TSST-1,GP
R16542 T24331 T24330 arg1Of TSST-1,+
R16543 T24332 T24319 arg2Of and,with
R16544 T24335 T24332 arg2Of LPS,and
R16545 T24335 T24333 arg1Of LPS,GP
R16546 T24335 T24334 arg1Of LPS,+
R16547 T24335 T24336 arg1Of LPS,for
R16548 T24338 T24336 arg2Of h,for
R16549 T24338 T24337 arg1Of h,1
R16550 T24338 T24339 arg1Of h,at
R16551 T24338 T24349 arg1Of h,to
R16552 T24341 T24340 arg1Of Schematic,37°C.
R16553 T24342 T24339 arg2Of representation,at
R16554 T24342 T24341 arg1Of representation,Schematic
R16555 T24342 T24343 arg1Of representation,of
R16556 T24348 T24343 arg2Of activity,of
R16557 T24348 T24344 arg1Of activity,the
R16558 T24348 T24345 arg1Of activity,elevated
R16559 T24348 T24346 arg1Of activity,NFAT-DNA
R16560 T24348 T24347 arg1Of activity,binding
R16561 T24351 T24349 arg2Of site,to
R16562 T24351 T24350 arg1Of site,the
R16563 T24351 T24352 arg1Of site,in
R16564 T24355 T24352 arg2Of promoter,in
R16565 T24355 T24353 arg1Of promoter,the
R16566 T24355 T24354 arg1Of promoter,IL-1RA
R16567 T24356 T24357 arg1Of Bars,depicting
R16568 T24356 T24367 arg1Of Bars,are
R16569 T24356 T24368 arg2Of Bars,added
R16570 T24360 T24357 arg2Of values,depicting
R16571 T24360 T24358 arg1Of values,the
R16572 T24360 T24359 arg1Of values,theoretical
R16573 T24360 T24361 arg1Of values,for
R16574 T24363 T24362 arg1Of calc.,GP/LPS
R16575 T24363 T24364 arg1Of calc.,and
R16576 T24364 T24361 arg2Of and,for
R16577 T24366 T24364 arg2Of calc.,and
R16578 T24366 T24365 arg1Of calc.,GP/TSST-1
R16579 T24368 T24367 arg2Of added,are
R16580 T24371 T24369 arg1Of levels,Medium
R16581 T24371 T24370 arg1Of levels,control
R16582 T24371 T24372 arg1Of levels,were
R16583 T24371 T24373 arg2Of levels,set
R16584 T24371 T24374 arg1Of levels,equal
R16585 T24373 T24372 arg2Of set,were
R16586 T24374 T24373 arg3Of equal,set
R16587 T24374 T24375 arg1Of equal,to
R16588 T24376 T24377 arg1Of 1,±
R16589 T24377 T24375 arg2Of ±,to
R16590 T24377 T24379 arg1Of ±,(
R16591 T24378 T24377 arg2Of SEM,±
R16592 T24380 T24381 arg1Of n,=
R16593 T24381 T24379 arg2Of =,(
R16594 T24382 T24381 arg2Of 6,=
R16595 T24383 T24379 arg3Of ),(
R16596 T24385 T24384 arg1Of autoradiogram,An
R16597 T24385 T24386 arg1Of autoradiogram,of
R16598 T24385 T24390 arg1Of autoradiogram,is
R16599 T24385 T24391 arg2Of autoradiogram,shown
R16600 T24389 T24386 arg2Of experiment,of
R16601 T24389 T24387 arg1Of experiment,a
R16602 T24389 T24388 arg1Of experiment,representative
R16603 T24391 T24390 arg2Of shown,is
R16604 T24391 T24392 arg1Of shown,in
R16605 T24395 T24392 arg2Of panel,in
R16606 T24395 T24393 arg1Of panel,the
R16607 T24395 T24394 arg1Of panel,lower
R16608 T24395 T24396 arg1Of panel,(
R16609 T24397 T24396 arg2Of lane,(
R16610 T24397 T24398 arg1Of lane,1
R16611 T24397 T24399 arg1Of lane,:
R16612 T24400 T24399 arg2Of water,:
R16613 T24400 T24401 arg1Of water,;
R16614 T24400 T24432 arg1Of water,:
R16615 T24402 T24401 arg2Of lane,;
R16616 T24402 T24403 arg1Of lane,2
R16617 T24402 T24404 arg1Of lane,:
R16618 T24406 T24405 arg1Of control,medium
R16619 T24406 T24407 arg1Of control,;
R16620 T24407 T24404 arg2Of ;,:
R16621 T24407 T24410 arg1Of ;,:
R16622 T24408 T24407 arg2Of lane,;
R16623 T24408 T24409 arg1Of lane,3
R16624 T24411 T24410 arg2Of GP,:
R16625 T24411 T24412 arg1Of GP,;
R16626 T24413 T24412 arg2Of lane,;
R16627 T24413 T24414 arg1Of lane,4
R16628 T24413 T24415 arg1Of lane,:
R16629 T24416 T24415 arg2Of LPS,:
R16630 T24416 T24417 arg1Of LPS,;
R16631 T24416 T24429 arg1Of LPS,;
R16632 T24418 T24417 arg2Of lane,;
R16633 T24418 T24419 arg1Of lane,5
R16634 T24418 T24420 arg1Of lane,:
R16635 T24421 T24420 arg2Of TSST-1,:
R16636 T24421 T24422 arg1Of TSST-1,","
R16637 T24421 T24425 arg1Of TSST-1,:
R16638 T24423 T24422 arg2Of lane,","
R16639 T24423 T24424 arg1Of lane,6
R16640 T24426 T24427 arg1Of GP,+
R16641 T24427 T24425 arg2Of +,:
R16642 T24428 T24427 arg2Of LPS,+
R16643 T24430 T24429 arg2Of lane,;
R16644 T24430 T24431 arg1Of lane,7
R16645 T24433 T24432 arg2Of GP,:
R16646 T24433 T24434 arg1Of GP,+
R16647 T24433 T24435 arg1Of GP,TSST-1
R16648 T24436 T24396 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T24234 765-771 Protein denotes TSST-1
T24233 726-732 Protein denotes TSST-1
T24232 496-502 Protein denotes TSST-1
T24231 417-423 Protein denotes IL-1RA
T24230 372-376 Protein denotes NFAT
T24229 294-300 Protein denotes TSST-1
T24228 277-283 Protein denotes TSST-1
T24227 202-208 Protein denotes TSST-1
T24226 134-140 Protein denotes TSST-1
T24225 70-76 Protein denotes IL-1RA
T24224 13-19 Protein denotes TSST-1

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T24446 417-423 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T24445 70-76 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T24444 765-771 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24443 726-732 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24442 496-502 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24441 294-300 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24440 277-283 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24439 202-208 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24438 134-140 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T24437 13-19 http://www.uniprot.org/uniprot/P06886 denotes TSST-1

GO-MF

Id Subject Object Predicate Lexical cue
T24238 381-388 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T24237 32-39 http://purl.obolibrary.org/obo/GO_0005488 denotes binding
T24236 377-388 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding
T24235 28-39 http://purl.obolibrary.org/obo/GO_0003677 denotes DNA binding

sentences

Id Subject Object Predicate Lexical cue
T24201 577-773 Sentence denotes An autoradiogram of a representative experiment is shown in the lower panel (lane 1: water; lane 2: medium control; lane 3: GP; lane 4: LPS; lane 5: TSST-1, lane 6: GP + LPS; lane 7: GP + TSST-1).
T24200 520-576 Sentence denotes Medium control levels were set equal to 1 ± SEM (n = 6).
T24199 434-519 Sentence denotes Bars depicting the theoretical values for GP/LPS calc. and GP/TSST-1 calc. are added.
T24198 225-433 Sentence denotes Human PBMC were incubated with medium control, LPS, TSST-1, GP, GP + TSST-1 and GP + LPS for 1 h at 37°C. Schematic representation of the elevated NFAT-DNA binding activity to the site in the IL-1RA promoter.
T24197 87-224 Sentence denotes Binding was up-regulated for GP + LPS and GP + TSST-1, when compared to GP and, in the latter case, to both GP and TSST-1 (* = p < 0.05).
T24196 0-86 Sentence denotes GP modulated TSST-1-induced DNA binding to a new NFATP2/3 site in the IL-1RA promoter.
T142 87-224 Sentence denotes Binding was up-regulated for GP + LPS and GP + TSST-1, when compared to GP and, in the latter case, to both GP and TSST-1 (* = p < 0.05).
T143 225-330 Sentence denotes Human PBMC were incubated with medium control, LPS, TSST-1, GP, GP + TSST-1 and GP + LPS for 1 h at 37°C.
T144 331-433 Sentence denotes Schematic representation of the elevated NFAT-DNA binding activity to the site in the IL-1RA promoter.
T145 434-519 Sentence denotes Bars depicting the theoretical values for GP/LPS calc. and GP/TSST-1 calc. are added.
T146 520-576 Sentence denotes Medium control levels were set equal to 1 ± SEM (n = 6).
T147 577-773 Sentence denotes An autoradiogram of a representative experiment is shown in the lower panel (lane 1: water; lane 2: medium control; lane 3: GP; lane 4: LPS; lane 5: TSST-1, lane 6: GP + LPS; lane 7: GP + TSST-1).

simple1

Id Subject Object Predicate Lexical cue
T24265 765-771 Protein denotes TSST-1
T24264 726-732 Protein denotes TSST-1
T24263 496-502 Protein denotes TSST-1
T24262 417-423 Protein denotes IL-1RA
T24261 372-376 Protein denotes NFAT
T24260 294-300 Protein denotes TSST-1
T24259 277-283 Protein denotes TSST-1
T24258 202-208 Protein denotes TSST-1
T24257 134-140 Protein denotes TSST-1
T24256 70-76 Protein denotes IL-1RA
T24255 13-19 Protein denotes TSST-1

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T24724 363-371 Positive_regulation denotes elevated
T24723 87-94 Binding denotes Binding
T24722 99-111 Positive_regulation denotes up-regulated
T24721 765-771 Protein denotes TSST-1
T24720 726-732 Protein denotes TSST-1
T24719 496-502 Protein denotes TSST-1
T24718 417-423 Protein denotes IL-1RA
T24717 372-376 Protein denotes NFAT
T24716 294-300 Protein denotes TSST-1
T24715 277-283 Protein denotes TSST-1
T24714 202-208 Protein denotes TSST-1
T24713 134-140 Protein denotes TSST-1
T24712 70-76 Protein denotes IL-1RA
T24711 13-19 Protein denotes TSST-1
R16854 T24714 T24723 themeOf TSST-1,Binding
R16855 T24714 T24722 themeOf TSST-1,up-regulated
R16856 T24717 T24724 themeOf NFAT,elevated

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T24459 20-27 Positive_regulation denotes induced
T24458 3-12 Regulation denotes modulated
T24457 765-771 Protein denotes TSST-1
T24456 726-732 Protein denotes TSST-1
T24455 496-502 Protein denotes TSST-1
T24454 417-423 Protein denotes IL-1RA
T24453 372-376 Protein denotes NFAT
T24452 294-300 Protein denotes TSST-1
T24451 277-283 Protein denotes TSST-1
T24450 202-208 Protein denotes TSST-1
T24449 134-140 Protein denotes TSST-1
T24448 70-76 Protein denotes IL-1RA
T24447 13-19 Protein denotes TSST-1
T24463 381-388 Binding denotes binding
T24462 363-371 Positive_regulation denotes elevated
T24461 87-94 Binding denotes Binding
T24460 32-39 Binding denotes binding
R16649 T24447 T24459 causeOf TSST-1,induced
R16650 T24448 T24460 themeOf IL-1RA,binding
R16651 T24450 T24461 themeOf TSST-1,Binding
R16652 T24453 T24462 themeOf NFAT,elevated
R16653 T24453 T24463 themeOf NFAT,binding
R16654 T24459 T24458 themeOf induced,modulated
R16655 T24460 T24458 themeOf binding,modulated
R16656 T24460 T24459 themeOf binding,induced

DLUT931

Id Subject Object Predicate Lexical cue
T24480 363-371 Positive_regulation denotes elevated
T24479 381-388 Binding denotes binding
T24478 99-111 Positive_regulation denotes up-regulated
T24477 87-94 Binding denotes Binding
T24476 20-27 Positive_regulation denotes induced
T24475 32-39 Binding denotes binding
T24474 765-771 Protein denotes TSST-1
T24473 726-732 Protein denotes TSST-1
T24472 496-502 Protein denotes TSST-1
T24471 417-423 Protein denotes IL-1RA
T24470 372-376 Protein denotes NFAT
T24469 294-300 Protein denotes TSST-1
T24468 277-283 Protein denotes TSST-1
T24467 202-208 Protein denotes TSST-1
T24466 134-140 Protein denotes TSST-1
T24465 70-76 Protein denotes IL-1RA
T24464 13-19 Protein denotes TSST-1
R16657 T24464 T24476 causeOf TSST-1,induced
R16658 T24465 T24475 themeOf IL-1RA,binding
R16659 T24467 T24477 themeOf TSST-1,Binding
R16660 T24470 T24479 themeOf NFAT,binding
R16662 T24475 T24476 themeOf binding,induced
R16663 T24477 T24478 themeOf Binding,up-regulated
R16661 T24471 T24479 themeOf IL-1RA,binding
R16664 T24479 T24480 themeOf binding,elevated

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T24710 476-482 Entity denotes GP/LPS
T24709 202-208 Protein denotes TSST-1
T24708 225-235 Entity denotes Human PBMC
T24707 479-482 Entity denotes LPS
T24706 726-732 Protein denotes TSST-1
T24705 747-762 Entity denotes LPS; lane 7: GP
T24704 434-487 Protein denotes Bars depicting the theoretical values for GP/LPS calc
T24703 493-507 Protein denotes GP/TSST-1 calc
T24702 13-27 Protein denotes TSST-1-induced
T24701 121-124 Entity denotes LPS
T24700 277-291 Protein denotes TSST-1, GP, GP
T24699 70-76 Protein denotes IL-1RA
T24698 272-275 Entity denotes LPS
T24697 129-131 Protein denotes GP
T24696 496-502 Protein denotes TSST-1
T24695 476-487 Protein denotes GP/LPS calc
T24694 310-329 Entity denotes LPS for 1 h at 37°C
T24693 476-482 Protein denotes GP/LPS
T24692 401-432 Entity denotes the site in the IL-1RA promoter
T24691 713-716 Entity denotes LPS
T24690 277-288 Protein denotes TSST-1, GP,
T24689 417-423 Protein denotes IL-1RA
T24688 294-300 Protein denotes TSST-1
T24687 765-771 Protein denotes TSST-1
T24686 66-85 Entity denotes the IL-1RA promoter
T24685 134-140 Protein denotes TSST-1
T24684 372-388 Protein denotes NFAT-DNA binding
T24683 413-432 Entity denotes the IL-1RA promoter
T24682 116-118 Protein denotes GP
T24681 43-85 Entity denotes a new NFATP2/3 site in the IL-1RA promoter
R16852 T24683 T24689 partOf the IL-1RA promoter,IL-1RA
R16853 T24686 T24699 partOf the IL-1RA promoter,IL-1RA

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T24595 476-482 NNP denotes GP/LPS
T24594 472-475 IN denotes for
T24593 465-471 NNS denotes values
T24592 453-464 JJ denotes theoretical
T24591 449-452 DT denotes the
T24590 439-448 VBG denotes depicting
T24589 434-438 NNS denotes Bars
T24588 432-433 . denotes .
T24587 424-432 NN denotes promoter
T24586 417-423 NN denotes IL-1RA
T24585 413-416 DT denotes the
T24584 410-412 IN denotes in
T24583 405-409 NN denotes site
T24582 401-404 DT denotes the
T24581 398-400 TO denotes to
T24580 389-397 NN denotes activity
T24579 381-388 JJ denotes binding
T24578 372-380 NNP denotes NFAT-DNA
T24577 363-371 JJ denotes elevated
T24576 359-362 DT denotes the
T24575 356-358 IN denotes of
T24574 341-355 NN denotes representation
T24573 331-340 NNP denotes Schematic
T24572 328-330 NNP denotes C.
T24571 327-328 CD denotes °
T24570 325-327 CD denotes 37
T24569 322-324 IN denotes at
T24568 320-321 NN denotes h
T24567 318-319 CD denotes 1
T24566 314-317 IN denotes for
T24565 310-313 NNP denotes LPS
T24564 308-309 NNP denotes +
T24563 305-307 NNP denotes GP
T24562 301-304 CC denotes and
T24561 294-300 NNP denotes TSST-1
T24560 292-293 NNP denotes +
T24559 289-291 NNP denotes GP
T24558 287-288 , denotes ,
T24557 285-287 NNP denotes GP
T24556 283-284 , denotes ,
T24555 277-283 NNP denotes TSST-1
T24554 275-276 , denotes ,
T24553 272-275 NNP denotes LPS
T24552 270-271 , denotes ,
T24551 263-270 NN denotes control
T24550 256-262 NN denotes medium
T24549 251-255 IN denotes with
T24548 241-250 VBN denotes incubated
T24547 236-240 VBD denotes were
T24546 231-235 NNP denotes PBMC
T24545 225-230 NNP denotes Human
T24544 223-224 . denotes .
T24543 222-223 -RRB- denotes )
T24542 218-222 CD denotes 0.05
T24541 216-217 FW denotes <
T24540 214-215 FW denotes p
T24539 212-213 SYM denotes =
T24538 210-211 SYM denotes *
T24537 209-210 -LRB- denotes (
T24536 202-208 NNP denotes TSST-1
T24535 198-201 CC denotes and
T24534 195-197 NNP denotes GP
T24533 190-194 DT denotes both
T24532 187-189 TO denotes to
T24531 185-186 , denotes ,
T24530 181-185 NN denotes case
T24529 174-180 JJ denotes latter
T24528 170-173 DT denotes the
T24527 167-169 IN denotes in
T24526 165-166 , denotes ,
T24525 162-165 CC denotes and
T24524 159-161 NNP denotes GP
T24523 156-158 TO denotes to
T24522 147-155 VBN denotes compared
T24521 142-146 WRB denotes when
T24520 140-141 , denotes ,
T24519 134-140 NNP denotes TSST-1
T24518 132-133 NNP denotes +
T24517 129-131 NNP denotes GP
T24516 125-128 CC denotes and
T24515 121-124 NNP denotes LPS
T24514 119-120 NNP denotes +
T24513 116-118 NNP denotes GP
T24512 112-115 IN denotes for
T24511 99-111 JJ denotes up-regulated
T24510 95-98 VBD denotes was
T24509 87-94 VBG denotes Binding
T24508 85-86 . denotes .
T24507 77-85 NN denotes promoter
T24506 70-76 NN denotes IL-1RA
T24505 66-69 DT denotes the
T24504 63-65 IN denotes in
T24503 58-62 NN denotes site
T24502 49-57 NNP denotes NFATP2/3
T24501 45-48 JJ denotes new
T24500 43-44 DT denotes a
T24499 40-42 TO denotes to
T24498 32-39 JJ denotes binding
T24497 28-31 NNP denotes DNA
T24496 13-27 JJ denotes TSST-1-induced
T24495 3-12 VBD denotes modulated
T24494 0-2 NNP denotes GP
T24675 772-773 . denotes .
T24674 771-772 -RRB- denotes )
T24673 765-771 NNP denotes TSST-1
T24672 763-764 NNP denotes +
T24671 760-762 NNP denotes GP
T24670 758-759 : denotes :
T24669 757-758 CD denotes 7
T24668 752-756 NN denotes lane
T24667 750-751 : denotes ;
T24666 747-750 NNP denotes LPS
T24665 745-746 NNP denotes +
T24664 742-744 NNP denotes GP
T24663 740-741 : denotes :
T24662 739-740 CD denotes 6
T24661 734-738 NN denotes lane
T24660 732-733 , denotes ,
T24659 726-732 NN denotes TSST-1
T24658 724-725 : denotes :
T24657 723-724 CD denotes 5
T24656 718-722 NN denotes lane
T24655 716-717 : denotes ;
T24654 713-716 NNP denotes LPS
T24653 711-712 : denotes :
T24652 710-711 CD denotes 4
T24651 705-709 NN denotes lane
T24650 703-704 : denotes ;
T24649 701-703 NNP denotes GP
T24648 699-700 : denotes :
T24647 698-699 CD denotes 3
T24646 693-697 NN denotes lane
T24645 691-692 : denotes ;
T24644 684-691 NN denotes control
T24643 677-683 NN denotes medium
T24642 675-676 : denotes :
T24641 674-675 CD denotes 2
T24640 669-673 NN denotes lane
T24639 667-668 : denotes ;
T24638 662-667 NN denotes water
T24637 660-661 : denotes :
T24636 659-660 CD denotes 1
T24635 654-658 NN denotes lane
T24634 653-654 -LRB- denotes (
T24633 647-652 NN denotes panel
T24632 641-646 JJR denotes lower
T24631 637-640 DT denotes the
T24630 634-636 IN denotes in
T24629 628-633 VBN denotes shown
T24628 625-627 VBZ denotes is
T24627 614-624 NN denotes experiment
T24626 599-613 NN denotes representative
T24625 597-598 DT denotes a
T24624 594-596 IN denotes of
T24623 580-593 NN denotes autoradiogram
T24622 577-579 DT denotes An
T24621 575-576 . denotes .
T24620 574-575 -RRB- denotes )
T24619 573-574 CD denotes 6
T24618 571-572 SYM denotes =
T24617 569-570 FW denotes n
T24616 568-569 -LRB- denotes (
T24615 564-567 NNP denotes SEM
T24614 562-563 CD denotes ±
T24613 560-561 CD denotes 1
T24612 557-559 TO denotes to
T24611 551-556 JJ denotes equal
T24610 547-550 VBN denotes set
T24609 542-546 VBD denotes were
T24608 535-541 NNS denotes levels
T24607 527-534 NN denotes control
T24606 520-526 NN denotes Medium
T24605 518-519 . denotes .
T24604 513-518 VBN denotes added
T24603 509-512 VBP denotes are
T24602 507-508 . denotes .
T24601 503-507 NN denotes calc
T24600 500-502 CD denotes -1
T24599 493-500 NNP denotes GP/TSST
T24598 489-492 CC denotes and
T24597 487-488 . denotes .
T24596 483-487 NN denotes calc
R16668 T24494 T24495 nsubj GP,modulated
R16669 T24495 T24495 ROOT modulated,modulated
R16670 T24496 T24497 compound TSST-1-induced,DNA
R16671 T24497 T24495 dobj DNA,modulated
R16672 T24498 T24495 advcl binding,modulated
R16673 T24499 T24498 prep to,binding
R16674 T24500 T24503 det a,site
R16675 T24501 T24503 amod new,site
R16676 T24502 T24503 compound NFATP2/3,site
R16677 T24503 T24499 pobj site,to
R16678 T24504 T24503 prep in,site
R16679 T24505 T24507 det the,promoter
R16680 T24506 T24507 compound IL-1RA,promoter
R16681 T24507 T24504 pobj promoter,in
R16682 T24508 T24495 punct .,modulated
R16683 T24509 T24510 nsubj Binding,was
R16684 T24510 T24510 ROOT was,was
R16685 T24511 T24510 acomp up-regulated,was
R16686 T24512 T24511 prep for,up-regulated
R16687 T24513 T24515 compound GP,LPS
R16688 T24514 T24515 compound +,LPS
R16689 T24515 T24512 pobj LPS,for
R16690 T24516 T24515 cc and,LPS
R16691 T24517 T24519 compound GP,TSST-1
R16692 T24518 T24519 compound +,TSST-1
R16693 T24519 T24515 conj TSST-1,LPS
R16694 T24520 T24510 punct ",",was
R16695 T24521 T24522 advmod when,compared
R16696 T24522 T24510 advcl compared,was
R16697 T24523 T24522 prep to,compared
R16698 T24524 T24523 pobj GP,to
R16699 T24525 T24524 cc and,GP
R16700 T24526 T24524 punct ",",GP
R16701 T24527 T24524 prep in,GP
R16702 T24528 T24530 det the,case
R16703 T24529 T24530 amod latter,case
R16704 T24530 T24527 pobj case,in
R16705 T24531 T24510 punct ",",was
R16706 T24532 T24540 prep to,p
R16707 T24533 T24534 preconj both,GP
R16708 T24534 T24532 pobj GP,to
R16709 T24535 T24534 cc and,GP
R16710 T24536 T24534 conj TSST-1,GP
R16711 T24537 T24540 punct (,p
R16712 T24538 T24540 punct *,p
R16713 T24539 T24540 punct =,p
R16714 T24540 T24510 advcl p,was
R16715 T24541 T24542 nmod <,0.05
R16716 T24542 T24540 npadvmod 0.05,p
R16717 T24543 T24540 punct ),p
R16718 T24544 T24510 punct .,was
R16719 T24545 T24546 compound Human,PBMC
R16720 T24546 T24548 nsubjpass PBMC,incubated
R16721 T24547 T24548 auxpass were,incubated
R16722 T24548 T24548 ROOT incubated,incubated
R16723 T24549 T24548 prep with,incubated
R16724 T24550 T24551 compound medium,control
R16725 T24551 T24549 pobj control,with
R16726 T24552 T24551 punct ",",control
R16727 T24553 T24551 conj LPS,control
R16728 T24554 T24553 punct ",",LPS
R16729 T24555 T24553 conj TSST-1,LPS
R16730 T24556 T24555 punct ",",TSST-1
R16731 T24557 T24555 conj GP,TSST-1
R16732 T24558 T24557 punct ",",GP
R16733 T24559 T24561 compound GP,TSST-1
R16734 T24560 T24561 compound +,TSST-1
R16735 T24561 T24557 conj TSST-1,GP
R16736 T24562 T24561 cc and,TSST-1
R16737 T24563 T24565 compound GP,LPS
R16738 T24564 T24565 compound +,LPS
R16739 T24565 T24561 conj LPS,TSST-1
R16740 T24566 T24548 prep for,incubated
R16741 T24567 T24568 nummod 1,h
R16742 T24568 T24566 pobj h,for
R16743 T24569 T24568 prep at,h
R16744 T24570 T24571 nummod 37,°
R16745 T24571 T24574 nummod °,representation
R16746 T24572 T24573 compound C.,Schematic
R16747 T24573 T24574 compound Schematic,representation
R16748 T24574 T24569 pobj representation,at
R16749 T24575 T24574 prep of,representation
R16750 T24576 T24580 det the,activity
R16751 T24577 T24580 amod elevated,activity
R16752 T24578 T24580 nmod NFAT-DNA,activity
R16753 T24579 T24580 amod binding,activity
R16754 T24580 T24575 pobj activity,of
R16755 T24581 T24580 prep to,activity
R16756 T24582 T24583 det the,site
R16757 T24583 T24581 pobj site,to
R16758 T24584 T24583 prep in,site
R16759 T24585 T24587 det the,promoter
R16760 T24586 T24587 compound IL-1RA,promoter
R16761 T24587 T24584 pobj promoter,in
R16762 T24588 T24548 punct .,incubated
R16763 T24589 T24589 ROOT Bars,Bars
R16764 T24590 T24589 acl depicting,Bars
R16765 T24591 T24593 det the,values
R16766 T24592 T24593 amod theoretical,values
R16767 T24593 T24590 dobj values,depicting
R16768 T24594 T24593 prep for,values
R16769 T24595 T24596 compound GP/LPS,calc
R16770 T24596 T24594 pobj calc,for
R16771 T24597 T24590 punct .,depicting
R16772 T24598 T24601 cc and,calc
R16773 T24599 T24601 nmod GP/TSST,calc
R16774 T24600 T24601 nummod -1,calc
R16775 T24601 T24601 ROOT calc,calc
R16776 T24602 T24601 punct .,calc
R16777 T24603 T24604 auxpass are,added
R16778 T24604 T24604 ROOT added,added
R16779 T24605 T24604 punct .,added
R16780 T24606 T24608 compound Medium,levels
R16781 T24607 T24608 compound control,levels
R16782 T24608 T24610 nsubjpass levels,set
R16783 T24609 T24610 auxpass were,set
R16784 T24610 T24610 ROOT set,set
R16785 T24611 T24610 oprd equal,set
R16786 T24612 T24610 prep to,set
R16787 T24613 T24615 nummod 1,SEM
R16788 T24614 T24615 nummod ±,SEM
R16789 T24615 T24612 pobj SEM,to
R16790 T24616 T24619 punct (,6
R16791 T24617 T24619 advmod n,6
R16792 T24618 T24619 punct =,6
R16793 T24619 T24615 appos 6,SEM
R16794 T24620 T24610 punct ),set
R16795 T24621 T24610 punct .,set
R16796 T24622 T24623 det An,autoradiogram
R16797 T24623 T24629 nsubjpass autoradiogram,shown
R16798 T24624 T24623 prep of,autoradiogram
R16799 T24625 T24627 det a,experiment
R16800 T24626 T24627 compound representative,experiment
R16801 T24627 T24624 pobj experiment,of
R16802 T24628 T24629 auxpass is,shown
R16803 T24629 T24651 ccomp shown,lane
R16804 T24630 T24629 prep in,shown
R16805 T24631 T24633 det the,panel
R16806 T24632 T24633 amod lower,panel
R16807 T24633 T24630 pobj panel,in
R16808 T24634 T24633 punct (,panel
R16809 T24635 T24633 appos lane,panel
R16810 T24636 T24635 nummod 1,lane
R16811 T24637 T24633 punct :,panel
R16812 T24638 T24633 appos water,panel
R16813 T24639 T24651 punct ;,lane
R16814 T24640 T24651 compound lane,lane
R16815 T24641 T24640 nummod 2,lane
R16816 T24642 T24640 punct :,lane
R16817 T24643 T24644 compound medium,control
R16818 T24644 T24640 appos control,lane
R16819 T24645 T24640 punct ;,lane
R16820 T24646 T24640 appos lane,lane
R16821 T24647 T24646 nummod 3,lane
R16822 T24648 T24646 punct :,lane
R16823 T24649 T24646 appos GP,lane
R16824 T24650 T24640 punct ;,lane
R16825 T24651 T24651 ROOT lane,lane
R16826 T24652 T24651 nummod 4,lane
R16827 T24653 T24651 punct :,lane
R16828 T24654 T24651 appos LPS,lane
R16829 T24655 T24651 punct ;,lane
R16830 T24656 T24651 appos lane,lane
R16831 T24657 T24656 nummod 5,lane
R16832 T24658 T24656 punct :,lane
R16833 T24659 T24656 appos TSST-1,lane
R16834 T24660 T24659 punct ",",TSST-1
R16835 T24661 T24651 appos lane,lane
R16836 T24662 T24661 nummod 6,lane
R16837 T24663 T24661 punct :,lane
R16838 T24664 T24666 compound GP,LPS
R16839 T24665 T24666 compound +,LPS
R16840 T24666 T24661 appos LPS,lane
R16841 T24667 T24661 punct ;,lane
R16842 T24668 T24651 appos lane,lane
R16843 T24669 T24668 nummod 7,lane
R16844 T24670 T24651 punct :,lane
R16845 T24671 T24673 compound GP,TSST-1
R16846 T24672 T24673 compound +,TSST-1
R16847 T24673 T24651 appos TSST-1,lane
R16848 T24674 T24651 punct ),lane
R16849 T24675 T24651 punct .,lane

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T24243 363-371 Positive_regulation denotes elevated
T24242 381-388 Binding denotes binding
T24241 417-432 Protein denotes IL-1RA promoter
T24240 372-380 Protein denotes NFAT-DNA
T24239 70-85 Protein denotes IL-1RA promoter
R16474 T24240 T24242 themeOf NFAT-DNA,binding
R16475 T24242 T24243 themeOf binding,elevated

testone

Id Subject Object Predicate Lexical cue
T24169 381-388 Binding denotes binding
T24168 363-371 Positive_regulation denotes elevated
T24167 99-111 Positive_regulation denotes up-regulated
T24166 87-94 Binding denotes Binding
T24165 32-39 Binding denotes binding
T24164 20-27 Positive_regulation denotes induced
T24163 3-12 Regulation denotes modulated
T24162 765-771 Protein denotes TSST-1
T24161 726-732 Protein denotes TSST-1
T24160 496-502 Protein denotes TSST-1
T24159 417-423 Protein denotes IL-1RA
T24158 372-376 Protein denotes NFAT
T24157 294-300 Protein denotes TSST-1
T24156 277-283 Protein denotes TSST-1
T24155 202-208 Protein denotes TSST-1
T24154 134-140 Protein denotes TSST-1
T24153 70-76 Protein denotes IL-1RA
T24152 13-19 Protein denotes TSST-1
R16446 T24152 T24164 causeOf TSST-1,induced
R16447 T24154 T24167 themeOf TSST-1,up-regulated
R16448 T24155 T24167 themeOf TSST-1,up-regulated
R16449 T24158 T24169 themeOf NFAT,binding
R16450 T24164 T24163 themeOf induced,modulated
R16451 T24165 T24163 themeOf binding,modulated
R16452 T24165 T24164 themeOf binding,induced
R16453 T24166 T24167 causeOf Binding,up-regulated
R16454 T24166 T24167 themeOf Binding,up-regulated
R16455 T24169 T24168 themeOf binding,elevated

test3

Id Subject Object Predicate Lexical cue
T24195 765-771 Protein denotes TSST-1
T24194 726-732 Protein denotes TSST-1
T24193 496-502 Protein denotes TSST-1
T24192 417-423 Protein denotes IL-1RA
T24191 381-388 Binding denotes binding
T24190 372-376 Protein denotes NFAT
T24189 294-300 Protein denotes TSST-1
T24188 277-283 Protein denotes TSST-1
T24187 202-208 Protein denotes TSST-1
T24186 134-140 Protein denotes TSST-1
T24185 99-101 Positive_regulation denotes up
T24184 87-94 Binding denotes Binding
T24183 70-76 Protein denotes IL-1RA
T24182 32-39 Binding denotes binding
T24181 13-19 Protein denotes TSST-1
T24180 765-771 Protein denotes TSST-1
T24179 726-732 Protein denotes TSST-1
T24178 496-502 Protein denotes TSST-1
T24177 417-423 Protein denotes IL-1RA
T24176 372-376 Protein denotes NFAT
T24175 294-300 Protein denotes TSST-1
T24174 277-283 Protein denotes TSST-1
T24173 202-208 Protein denotes TSST-1
T24172 134-140 Protein denotes TSST-1
T24171 70-76 Protein denotes IL-1RA
T24170 13-19 Protein denotes TSST-1
R16456 T24181 T24182 themeOf TSST-1,binding
R16457 T24186 T24184 themeOf TSST-1,Binding
R16458 T24187 T24184 themeOf TSST-1,Binding
R16459 T24190 T24191 themeOf NFAT,binding