> top > docs > PMC:1472690 > spans > 15595-15914 > annotations

PMC:1472690 / 15595-15914 JSONTXT

Annnotations TAB JSON ListView MergeView

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5957 317-318 -RRB- denotes )
T5956 312-317 VB denotes shown
T5955 308-311 RB denotes not
T5954 303-307 NN denotes data
T5953 302-303 -LRB- denotes (
T5952 296-301 NN denotes calc.
T5951 286-295 NN denotes GP/TSST-1
T5950 283-285 CC denotes or
T5949 276-282 NN denotes TSST-1
T5948 273-275 TO denotes to
T5947 264-272 VB denotes compared
T5946 259-263 WRB denotes when
T5945 257-258 -COMMA- denotes ,
T5944 256-257 NN denotes h
T5943 253-255 CD denotes 36
T5942 249-252 CC denotes and
T5941 247-248 NN denotes h
T5940 244-246 CD denotes 24
T5939 241-243 IN denotes at
T5938 234-240 NN denotes TSST-1
T5937 232-233 SYM denotes +
T5902 57-61 NN denotes PBMC
T5901 54-56 IN denotes of
T5900 44-53 NN denotes treatment
T5899 34-43 VB denotes following
T5898 23-33 JJ denotes detectable
T5897 19-22 VB denotes was
T5896 8-18 NN denotes production
T5895 3-7 NN denotes IFNγ
T5894 0-2 DT denotes No
T5936 229-231 NN denotes GP
T5935 219-228 VB denotes following
T5934 203-218 NN denotes down-regulation
T5933 196-202 JJ denotes slight
T5932 194-195 DT denotes a
T5931 190-193 CC denotes and
T5930 188-189 -COMMA- denotes ,
T5929 183-188 NN denotes calc.
T5928 176-182 NN denotes GP/LPS
T5927 173-175 CC denotes or
T5926 169-172 NN denotes LPS
T5925 166-168 TO denotes to
T5924 157-165 VB denotes compared
T5923 152-156 WRB denotes when
T5922 150-151 -COMMA- denotes ,
T5921 149-150 NN denotes h
T5920 146-148 CD denotes 36
T5919 143-145 IN denotes at
T5918 139-142 NN denotes LPS
T5917 137-138 SYM denotes +
T5916 134-136 NN denotes GP
T5915 124-133 VB denotes following
T5914 113-123 NN denotes production
T5913 108-112 NN denotes IFNγ
T5912 105-107 IN denotes in
T5911 96-104 NN denotes increase
T5910 90-95 JJ denotes minor
T5909 88-89 DT denotes a
T5908 84-87 VB denotes was
T5907 78-83 EX denotes There
T5906 74-76 NN denotes GP
T5905 71-73 NN denotes μg
T5904 67-70 CD denotes 100
T5903 62-66 IN denotes with
R3662 T5938 T5935 arg2Of TSST-1,following
R3664 T5938 T5936 arg1Of TSST-1,GP
R3665 T5938 T5937 arg1Of TSST-1,+
R3666 T5938 T5939 arg1Of TSST-1,at
R3667 T5941 T5940 arg1Of h,24
R3668 T5941 T5942 arg1Of h,and
R3670 T5942 T5939 arg2Of and,at
R3672 T5944 T5942 arg2Of h,and
R3673 T5944 T5943 arg1Of h,36
R3674 T5947 T5946 arg2Of compared,when
R3675 T5947 T5948 arg1Of compared,to
R3677 T5949 T5950 arg1Of TSST-1,or
R3679 T5950 T5948 arg2Of or,to
R3680 T5952 T5950 arg2Of calc.,or
R3681 T5952 T5951 arg1Of calc.,GP/TSST-1
R3682 T5952 T5953 arg1Of calc.,(
R3685 T5954 T5953 arg2Of data,(
R3686 T5954 T5956 arg2Of data,shown
R3687 T5956 T5955 arg1Of shown,not
R3688 T5957 T5953 arg3Of ),(
R3722 T5896 T5894 arg1Of production,No
R3729 T5896 T5895 arg1Of production,IFNγ
R3734 T5896 T5897 arg1Of production,was
R3738 T5896 T5898 arg1Of production,detectable
R3740 T5897 T5899 arg1Of was,following
R3745 T5898 T5897 arg2Of detectable,was
R3747 T5900 T5899 arg2Of treatment,following
R3755 T5900 T5901 arg1Of treatment,of
R3756 T5902 T5901 arg2Of PBMC,of
R3760 T5902 T5903 arg1Of PBMC,with
R3763 T5906 T5903 arg2Of GP,with
R3774 T5906 T5904 arg1Of GP,100
R3775 T5906 T5905 arg1Of GP,μg
R3776 T5907 T5908 arg1Of There,was
R3777 T5908 T5922 arg1Of was,","
R3778 T5908 T5923 arg1Of was,when
R3779 T5911 T5908 arg2Of increase,was
R3780 T5911 T5909 arg1Of increase,a
R3781 T5911 T5910 arg1Of increase,minor
R3782 T5911 T5912 arg1Of increase,in
R3783 T5914 T5912 arg2Of production,in
R3784 T5914 T5913 arg1Of production,IFNγ
R3785 T5914 T5915 arg1Of production,following
R3786 T5918 T5915 arg2Of LPS,following
R3787 T5918 T5916 arg1Of LPS,GP
R3788 T5918 T5917 arg1Of LPS,+
R3789 T5918 T5919 arg1Of LPS,at
R3790 T5921 T5919 arg2Of h,at
R3791 T5921 T5920 arg1Of h,36
R3792 T5924 T5923 arg2Of compared,when
R3793 T5924 T5925 arg1Of compared,to
R3794 T5924 T5945 arg1Of compared,","
R3795 T5924 T5946 arg1Of compared,when
R3796 T5926 T5927 arg1Of LPS,or
R3797 T5927 T5931 arg1Of or,and
R3798 T5929 T5927 arg2Of calc.,or
R3799 T5929 T5928 arg1Of calc.,GP/LPS
R3800 T5931 T5925 arg2Of and,to
R3801 T5931 T5930 arg1Of and,","
R3802 T5934 T5931 arg2Of down-regulation,and
R3803 T5934 T5932 arg1Of down-regulation,a
R3804 T5934 T5933 arg1Of down-regulation,slight
R3805 T5934 T5935 arg1Of down-regulation,following

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4982 289-295 Protein denotes TSST-1
T4981 276-282 Protein denotes TSST-1
T4980 234-240 Protein denotes TSST-1
T4979 108-112 Protein denotes IFNγ
T4978 3-7 Protein denotes IFNγ

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6046 289-295 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T6045 276-282 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T6044 234-240 http://www.uniprot.org/uniprot/P06886 denotes TSST-1

GO-BP

Id Subject Object Predicate Lexical cue
T4758 208-218 http://purl.obolibrary.org/obo/GO_0065007 denotes regulation

sentences

Id Subject Object Predicate Lexical cue
T4749 78-319 Sentence denotes There was a minor increase in IFNγ production following GP + LPS at 36 h, when compared to LPS or GP/LPS calc., and a slight down-regulation following GP + TSST-1 at 24 h and 36 h, when compared to TSST-1 or GP/TSST-1 calc. (data not shown).
T4748 0-77 Sentence denotes No IFNγ production was detectable following treatment of PBMC with 100 μg GP.
T121 0-77 Sentence denotes No IFNγ production was detectable following treatment of PBMC with 100 μg GP.
T122 78-319 Sentence denotes There was a minor increase in IFNγ production following GP + LPS at 36 h, when compared to LPS or GP/LPS calc., and a slight down-regulation following GP + TSST-1 at 24 h and 36 h, when compared to TSST-1 or GP/TSST-1 calc. (data not shown).

simple1

Id Subject Object Predicate Lexical cue
T5159 289-295 Protein denotes TSST-1
T5158 276-282 Protein denotes TSST-1
T5157 234-240 Protein denotes TSST-1
T5156 108-112 Protein denotes IFNγ
T5155 3-7 Protein denotes IFNγ

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7757 113-123 Gene_expression denotes production
T7756 203-218 Negative_regulation denotes down-regulation
T7755 96-104 Positive_regulation denotes increase
T7754 8-18 Gene_expression denotes production
T7706 289-295 Protein denotes TSST-1
T7705 276-282 Protein denotes TSST-1
T7704 234-240 Protein denotes TSST-1
T7703 108-112 Protein denotes IFNγ
T7702 3-7 Protein denotes IFNγ
R4999 T7702 T7754 themeOf IFNγ,production
R5000 T7703 T7757 themeOf IFNγ,production
R5001 T7704 T7756 themeOf TSST-1,down-regulation
R5042 T7757 T7755 themeOf production,increase

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6211 113-123 Gene_expression denotes production
T6210 219-228 Positive_regulation denotes following
T6209 203-218 Negative_regulation denotes down-regulation
T6208 96-104 Positive_regulation denotes increase
T6207 8-18 Gene_expression denotes production
T6152 3-7 Protein denotes IFNγ
T6156 289-295 Protein denotes TSST-1
T6155 276-282 Protein denotes TSST-1
T6154 234-240 Protein denotes TSST-1
T6153 108-112 Protein denotes IFNγ
R3818 T6152 T6207 themeOf IFNγ,production
R3819 T6153 T6211 themeOf IFNγ,production
R3821 T6154 T6209 themeOf TSST-1,down-regulation
R3870 T6211 T6210 themeOf production,following
R3871 T6211 T6208 themeOf production,increase

DLUT931

Id Subject Object Predicate Lexical cue
T6365 289-295 Protein denotes TSST-1
T6364 276-282 Protein denotes TSST-1
T6363 234-240 Protein denotes TSST-1
T6362 108-112 Protein denotes IFNγ
T6361 3-7 Protein denotes IFNγ
T6419 96-104 Positive_regulation denotes increase
T6418 219-228 Positive_regulation denotes following
T6417 203-218 Negative_regulation denotes down-regulation
T6416 113-123 Gene_expression denotes production
T6415 34-43 Positive_regulation denotes following
T6414 8-18 Gene_expression denotes production
R3943 T6361 T6414 themeOf IFNγ,production
R3947 T6362 T6416 themeOf IFNγ,production
R3948 T6363 T6417 themeOf TSST-1,down-regulation
R4009 T6414 T6415 themeOf production,following
R4012 T6416 T6418 themeOf production,following
R4015 T6416 T6419 themeOf production,increase

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7801 0-18 Gene_expression denotes No IFNγ production
T7611 169-172 Entity denotes LPS
T7608 234-246 Protein denotes TSST-1 at 24
T7583 54-76 Entity denotes of PBMC with 100 μg GP
T7577 139-148 Entity denotes LPS at 36
T7556 256-257 Entity denotes h
T7534 289-295 Protein denotes TSST-1
T7529 67-76 Protein denotes 100 μg GP
T7524 176-182 Entity denotes GP/LPS
T7518 108-112 Protein denotes IFNγ
T7514 247-248 Entity denotes h
T7505 149-150 Entity denotes h
T7643 286-300 Protein denotes GP/TSST-1 calc
T7625 3-7 Protein denotes IFNγ
T7622 179-182 Entity denotes LPS
T7790 108-136 Gene_expression denotes IFNγ production following GP
T7764 276-282 Protein denotes TSST-1
T7761 176-182 Protein denotes GP/LPS
R4948 T7518 T7790 themeOf IFNγ,IFNγ production following GP
R4979 T7625 T7801 themeOf IFNγ,No IFNγ production

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7342 318-319 . denotes .
T7341 317-318 -RRB- denotes )
T7340 312-317 VBN denotes shown
T7339 308-311 RB denotes not
T7338 303-307 NNS denotes data
T7337 302-303 -LRB- denotes (
T7336 300-301 . denotes .
T7335 296-300 NN denotes calc
T7334 293-295 CD denotes -1
T7333 286-293 NNP denotes GP/TSST
T7332 283-285 CC denotes or
T7331 276-282 CD denotes TSST-1
T7330 273-275 TO denotes to
T7329 264-272 VBN denotes compared
T7328 259-263 WRB denotes when
T7322 244-246 CD denotes 24
T7321 241-243 IN denotes at
T7320 234-240 NNP denotes TSST-1
T7319 232-233 NNP denotes +
T7318 229-231 NNP denotes GP
T7317 219-228 VBG denotes following
T7316 203-218 NN denotes down-regulation
T7315 196-202 JJ denotes slight
T7314 194-195 DT denotes a
T7313 190-193 CC denotes and
T7312 188-189 , denotes ,
T7311 183-188 NNP denotes calc.
T7310 176-182 NNP denotes GP/LPS
T7309 173-175 CC denotes or
T7308 169-172 NNP denotes LPS
T7307 166-168 TO denotes to
T7306 157-165 VBN denotes compared
T7305 152-156 WRB denotes when
T7304 150-151 , denotes ,
T7303 149-150 NN denotes h
T7302 146-148 CD denotes 36
T7301 143-145 IN denotes at
T7300 139-142 NNP denotes LPS
T7299 137-138 NNP denotes +
T7298 134-136 NNP denotes GP
T7297 124-133 VBG denotes following
T7296 113-123 NN denotes production
T7295 108-112 JJ denotes IFNγ
T7294 105-107 IN denotes in
T7293 96-104 NN denotes increase
T7292 90-95 JJ denotes minor
T7291 88-89 DT denotes a
T7290 84-87 VBD denotes was
T7289 78-83 EX denotes There
T7288 76-77 . denotes .
T7287 74-76 NNP denotes GP
T7286 71-73 NN denotes μg
T7285 67-70 CD denotes 100
T7284 62-66 IN denotes with
T7283 57-61 NNP denotes PBMC
T7282 54-56 IN denotes of
T7281 44-53 NN denotes treatment
T7280 34-43 VBG denotes following
T7279 23-33 JJ denotes detectable
T7278 19-22 VBD denotes was
T7277 8-18 NN denotes production
T7276 3-7 NNP denotes IFNγ
T7275 0-2 NNP denotes No
T7327 257-258 , denotes ,
T7326 256-257 NN denotes h
T7325 253-255 CD denotes 36
T7324 249-252 CC denotes and
T7323 247-248 NN denotes h
R4783 T7275 T7277 compound No,production
R4784 T7276 T7277 compound IFNγ,production
R4786 T7277 T7278 nsubj production,was
R4787 T7278 T7278 ROOT was,was
R4789 T7279 T7278 acomp detectable,was
R4790 T7280 T7278 prep following,was
R4791 T7281 T7280 dobj treatment,following
R4792 T7282 T7281 prep of,treatment
R4793 T7283 T7282 pobj PBMC,of
R4794 T7284 T7280 prep with,following
R4795 T7323 T7321 pobj h,at
R4796 T7285 T7286 nummod 100,μg
R4797 T7286 T7287 compound μg,GP
R4798 T7287 T7284 pobj GP,with
R4799 T7288 T7278 punct .,was
R4800 T7289 T7290 expl There,was
R4801 T7324 T7323 cc and,h
R4802 T7290 T7290 ROOT was,was
R4803 T7291 T7293 det a,increase
R4804 T7292 T7293 amod minor,increase
R4805 T7325 T7326 nummod 36,h
R4806 T7293 T7290 attr increase,was
R4807 T7294 T7293 prep in,increase
R4808 T7295 T7296 compound IFNγ,production
R4809 T7326 T7323 conj h,h
R4810 T7296 T7294 pobj production,in
R4811 T7297 T7293 prep following,increase
R4812 T7298 T7300 compound GP,LPS
R4813 T7299 T7300 compound +,LPS
R4814 T7327 T7326 punct ",",h
R4815 T7300 T7297 pobj LPS,following
R4816 T7301 T7293 prep at,increase
R4817 T7302 T7303 nummod 36,h
R4818 T7328 T7329 advmod when,compared
R4819 T7303 T7301 pobj h,at
R4820 T7304 T7303 punct ",",h
R4821 T7329 T7290 advcl compared,was
R4822 T7305 T7306 advmod when,compared
R4823 T7306 T7290 advcl compared,was
R4824 T7307 T7306 prep to,compared
R4825 T7308 T7307 pobj LPS,to
R4826 T7330 T7329 prep to,compared
R4827 T7309 T7308 cc or,LPS
R4828 T7310 T7311 compound GP/LPS,calc.
R4829 T7311 T7308 conj calc.,LPS
R4830 T7331 T7330 pobj TSST-1,to
R4831 T7312 T7311 punct ",",calc.
R4832 T7313 T7306 cc and,compared
R4833 T7314 T7316 det a,down-regulation
R4834 T7332 T7331 cc or,TSST-1
R4835 T7315 T7316 amod slight,down-regulation
R4836 T7333 T7335 dep GP/TSST,calc
R4837 T7316 T7306 conj down-regulation,compared
R4838 T7334 T7335 nummod -1,calc
R4839 T7317 T7316 acl following,down-regulation
R4840 T7318 T7320 compound GP,TSST-1
R4841 T7335 T7331 conj calc,TSST-1
R4842 T7319 T7320 compound +,TSST-1
R4843 T7320 T7317 pobj TSST-1,following
R4844 T7321 T7317 prep at,following
R4845 T7322 T7323 nummod 24,h
R4846 T7336 T7290 punct .,was
R4847 T7337 T7338 punct (,data
R4848 T7338 T7338 ROOT data,data
R4849 T7339 T7340 neg not,shown
R4850 T7340 T7338 acl shown,data
R4851 T7341 T7338 punct ),data
R4852 T7342 T7338 punct .,data

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6287 96-104 Positive_regulation denotes increase
T6286 203-218 Negative_regulation denotes down-regulation
T6285 96-104 Positive_regulation denotes increase
T6284 113-123 Gene_expression denotes production
T6283 286-300 Protein denotes GP/TSST-1 calc
T6282 276-282 Protein denotes TSST-1
T6281 108-112 Protein denotes IFNγ
T6280 8-18 Gene_expression denotes production
T6279 3-7 Protein denotes IFNγ
R3885 T6279 T6280 themeOf IFNγ,production
R3889 T6281 T6284 themeOf IFNγ,production
R3891 T6284 T6285 themeOf production,increase
R3896 T6285 T6286 themeOf increase,down-regulation
R3898 T6286 T6287 themeOf down-regulation,increase

testone

Id Subject Object Predicate Lexical cue
T4469 289-295 Protein denotes TSST-1
T4468 276-282 Protein denotes TSST-1
T4467 234-240 Protein denotes TSST-1
T4466 108-112 Protein denotes IFNγ
T4465 3-7 Protein denotes IFNγ
T4526 203-218 Negative_regulation denotes down-regulation
T4525 124-133 Positive_regulation denotes following
T4524 113-123 Gene_expression denotes production
T4523 96-104 Positive_regulation denotes increase
T4522 34-43 Positive_regulation denotes following
T4521 8-18 Gene_expression denotes production
R2750 T4465 T4521 themeOf IFNγ,production
R2751 T4466 T4524 themeOf IFNγ,production
R2752 T4467 T4525 causeOf TSST-1,following
R2753 T4467 T4526 causeOf TSST-1,down-regulation
R2754 T4468 T4525 causeOf TSST-1,following
R2755 T4468 T4526 causeOf TSST-1,down-regulation
R2756 T4468 T4523 causeOf TSST-1,increase
R2757 T4469 T4526 causeOf TSST-1,down-regulation
R2785 T4521 T4522 themeOf production,following
R2786 T4523 T4525 themeOf increase,following
R2787 T4523 T4526 themeOf increase,down-regulation
R2788 T4524 T4526 themeOf production,down-regulation
R2789 T4524 T4523 themeOf production,increase
R2790 T4524 T4525 themeOf production,following

test3

Id Subject Object Predicate Lexical cue
T4590 289-295 Protein denotes TSST-1
T4589 276-282 Protein denotes TSST-1
T4588 234-240 Protein denotes TSST-1
T4587 108-112 Protein denotes IFNγ
T4586 3-7 Protein denotes IFNγ
T4703 289-295 Protein denotes TSST-1
T4702 276-282 Protein denotes TSST-1
T4701 234-240 Protein denotes TSST-1
T4700 203-218 Negative_regulation denotes down-regulation
T4699 124-133 Positive_regulation denotes following
T4698 113-123 Gene_expression denotes production
T4697 108-112 Protein denotes IFNγ
T4696 96-104 Positive_regulation denotes increase
T4695 34-43 Positive_regulation denotes following
T4694 8-18 Gene_expression denotes production
T4693 3-7 Protein denotes IFNγ
R2846 T4693 T4694 themeOf IFNγ,production
R2847 T4694 T4695 themeOf production,following
R2848 T4696 T4699 themeOf increase,following
R2849 T4697 T4698 themeOf IFNγ,production
R2850 T4698 T4700 themeOf production,down-regulation
R2851 T4698 T4696 themeOf production,increase
R2852 T4698 T4699 themeOf production,following
R2853 T4701 T4700 causeOf TSST-1,down-regulation
R2854 T4702 T4700 themeOf TSST-1,down-regulation
R2855 T4703 T4700 causeOf TSST-1,down-regulation