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PMC:1472690 / 14765-15115 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5793 348-349 -RRB- denotes )
T5792 336-348 RB denotes respectively
T5791 334-335 -COMMA- denotes ,
T5790 330-334 CD denotes 0.98
T5789 326-329 CC denotes and
T5788 322-325 CD denotes 0.9
T5787 320-321 SYM denotes =
T5786 318-319 NN denotes r
T5785 316-317 -COMMA- denotes ,
T5784 311-316 CD denotes 0.002
T5783 309-310 -COMMA- denotes ≤
T5782 307-308 NN denotes p
T5781 305-306 -COMMA- denotes ,
T5780 304-305 CD denotes 5
T5779 302-303 SYM denotes =
T5778 300-301 NN denotes n
T5777 299-300 -LRB- denotes (
T5776 296-298 NN denotes GP
T5775 293-295 NN denotes μg
T5774 291-292 CD denotes 1
T5773 286-290 IN denotes than
T5772 279-285 NN denotes IL-1RA
T5771 275-278 CC denotes and
T5770 270-274 NN denotes IL-8
T5769 267-269 IN denotes of
T5768 259-266 NN denotes amounts
T5767 252-258 JJ denotes larger
T5766 244-251 VB denotes induced
T5765 241-243 NN denotes GP
T5764 238-240 IN denotes of
T5763 235-237 NN denotes μg
T5762 231-234 CD denotes 100
T5761 225-230 IN denotes since
T5760 223-224 -COMMA- denotes ,
T5759 209-223 JJ denotes dose-dependent
T5758 206-208 VB denotes be
T5757 203-205 TO denotes to
T5756 191-202 NN denotes correlation
T5755 186-190 DT denotes this
T5754 180-185 VB denotes found
T5753 177-179 PRP denotes we
T5752 175-176 -COMMA- denotes ,
T5751 167-175 RB denotes Moreover
T5750 159-165 NN denotes IL-1RA
T5749 155-158 CC denotes and
T5748 150-154 NN denotes IL-8
T5747 142-149 IN denotes between
T5746 130-141 NN denotes correlation
T5745 121-129 JJ denotes positive
T5744 119-120 DT denotes a
T5743 110-118 VB denotes observed
T5742 107-109 PRP denotes we
T5741 105-106 -COMMA- denotes ,
T5740 104-105 -RRB- denotes )
T5739 103-104 NN denotes h
T5738 100-102 CD denotes 24
T5737 99-100 -LRB- denotes (
T5736 96-98 NN denotes GP
T5735 91-95 IN denotes with
T5734 79-90 NN denotes stimulation
T5733 69-78 VB denotes Following
T5732 56-67 NN denotes productions
T5731 49-55 NN denotes IL-1RA
T5730 45-48 CC denotes and
T5729 40-44 NN denotes IL-8
T5728 29-39 JJ denotes GP-induced
T5727 21-28 IN denotes between
T5726 9-20 NN denotes correlation
T5725 0-8 JJ denotes Positive
R3507 T5726 T5725 arg1Of correlation,Positive
R3508 T5726 T5727 arg1Of correlation,between
R3509 T5729 T5730 arg1Of IL-8,and
R3510 T5731 T5730 arg2Of IL-1RA,and
R3511 T5732 T5727 arg2Of productions,between
R3512 T5732 T5728 arg1Of productions,GP-induced
R3513 T5732 T5729 arg1Of productions,IL-8
R3514 T5732 T5731 arg1Of productions,IL-1RA
R3515 T5734 T5733 arg2Of stimulation,Following
R3516 T5734 T5735 arg1Of stimulation,with
R3517 T5736 T5735 arg2Of GP,with
R3518 T5736 T5737 arg1Of GP,(
R3519 T5739 T5737 arg2Of h,(
R3520 T5739 T5738 arg1Of h,24
R3521 T5740 T5737 arg3Of ),(
R3522 T5742 T5743 arg1Of we,observed
R3524 T5743 T5733 arg1Of observed,Following
R3525 T5743 T5741 arg1Of observed,","
R3527 T5746 T5743 arg2Of correlation,observed
R3528 T5746 T5744 arg1Of correlation,a
R3529 T5746 T5745 arg1Of correlation,positive
R3530 T5746 T5747 arg1Of correlation,between
R3531 T5748 T5749 arg1Of IL-8,and
R3532 T5749 T5747 arg2Of and,between
R3533 T5750 T5749 arg2Of IL-1RA,and
R3535 T5753 T5754 arg1Of we,found
R3536 T5754 T5751 arg1Of found,Moreover
R3537 T5754 T5752 arg1Of found,","
R3538 T5754 T5760 arg1Of found,","
R3539 T5754 T5761 arg1Of found,since
R3540 T5756 T5754 arg2Of correlation,found
R3541 T5756 T5755 arg1Of correlation,this
R3542 T5756 T5758 arg1Of correlation,be
R3543 T5756 T5759 arg1Of correlation,dose-dependent
R3544 T5758 T5754 arg3Of be,found
R3545 T5758 T5757 arg1Of be,to
R3546 T5759 T5758 arg2Of dose-dependent,be
R3549 T5763 T5762 arg1Of μg,100
R3550 T5763 T5764 arg1Of μg,of
R3551 T5763 T5766 arg1Of μg,induced
R3552 T5765 T5764 arg2Of GP,of
R3553 T5766 T5761 arg2Of induced,since
R3556 T5768 T5766 arg2Of amounts,induced
R3557 T5768 T5767 arg1Of amounts,larger
R3558 T5768 T5769 arg1Of amounts,of
R3559 T5768 T5773 arg1Of amounts,than
R3560 T5768 T5777 arg1Of amounts,(
R3561 T5770 T5771 arg1Of IL-8,and
R3562 T5771 T5769 arg2Of and,of
R3563 T5772 T5771 arg2Of IL-1RA,and
R3565 T5776 T5773 arg2Of GP,than
R3566 T5776 T5774 arg1Of GP,1
R3567 T5776 T5775 arg1Of GP,μg
R3569 T5778 T5777 arg2Of n,(
R3570 T5778 T5779 arg1Of n,=
R3571 T5778 T5781 arg1Of n,","
R3572 T5779 T5780 arg1Of =,5
R3576 T5782 T5781 arg2Of p,","
R3577 T5782 T5784 arg1Of p,0.002
R3578 T5782 T5785 arg1Of p,","
R3579 T5782 T5791 arg1Of p,","
R3580 T5782 T5792 arg1Of p,respectively
R3581 T5784 T5783 arg1Of 0.002,≤
R3582 T5788 T5789 arg1Of 0.9,and
R3583 T5789 T5785 arg2Of and,","
R3584 T5789 T5786 arg1Of and,r
R3585 T5789 T5787 arg1Of and,=
R3586 T5790 T5789 arg2Of 0.98,and
R3588 T5793 T5777 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4970 279-285 Protein denotes IL-1RA
T4969 270-274 Protein denotes IL-8
T4968 159-165 Protein denotes IL-1RA
T4967 150-154 Protein denotes IL-8
T4966 49-55 Protein denotes IL-1RA
T4965 40-44 Protein denotes IL-8

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6084 279-285 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T6083 159-165 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T6082 49-55 http://www.uniprot.org/uniprot/P18510 denotes IL-1RA
T6065 270-274 http://www.uniprot.org/uniprot/P10145 denotes IL-8
T6064 150-154 http://www.uniprot.org/uniprot/P10145 denotes IL-8
T6063 40-44 http://www.uniprot.org/uniprot/P10145 denotes IL-8

GO-MF

Id Subject Object Predicate Lexical cue
T5005 270-274 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8
T5004 150-154 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8
T5003 40-44 http://purl.obolibrary.org/obo/GO_0005153 denotes IL-8

sentences

Id Subject Object Predicate Lexical cue
T4742 167-350 Sentence denotes Moreover, we found this correlation to be dose-dependent, since 100 μg of GP induced larger amounts of IL-8 and IL-1RA than 1 μg GP (n = 5, p ≤ 0.002, r = 0.9 and 0.98, respectively).
T4741 69-166 Sentence denotes Following stimulation with GP (24 h), we observed a positive correlation between IL-8 and IL-1RA.
T4740 0-68 Sentence denotes Positive correlation between GP-induced IL-8 and IL-1RA productions.
T113 0-68 Sentence denotes Positive correlation between GP-induced IL-8 and IL-1RA productions.
T114 69-166 Sentence denotes Following stimulation with GP (24 h), we observed a positive correlation between IL-8 and IL-1RA.
T115 167-350 Sentence denotes Moreover, we found this correlation to be dose-dependent, since 100 μg of GP induced larger amounts of IL-8 and IL-1RA than 1 μg GP (n = 5, p ≤ 0.002, r = 0.9 and 0.98, respectively).

simple1

Id Subject Object Predicate Lexical cue
T5147 279-285 Protein denotes IL-1RA
T5146 270-274 Protein denotes IL-8
T5145 159-165 Protein denotes IL-1RA
T5144 150-154 Protein denotes IL-8
T5143 49-55 Protein denotes IL-1RA
T5142 40-44 Protein denotes IL-8

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7748 244-251 Positive_regulation denotes induced
T7747 56-67 Gene_expression denotes productions
T7694 279-285 Protein denotes IL-1RA
T7693 270-274 Protein denotes IL-8
T7692 159-165 Protein denotes IL-1RA
T7691 150-154 Protein denotes IL-8
T7690 49-55 Protein denotes IL-1RA
T7689 40-44 Protein denotes IL-8
R4992 T7693 T7748 themeOf IL-8,induced
R4993 T7694 T7748 themeOf IL-1RA,induced
R5048 T7689 T7747 themeOf IL-8,productions

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6201 244-251 Positive_regulation denotes induced
T6200 56-67 Gene_expression denotes productions
T6199 29-39 Positive_regulation denotes GP-induced
T6144 279-285 Protein denotes IL-1RA
T6143 270-274 Protein denotes IL-8
T6142 159-165 Protein denotes IL-1RA
T6141 150-154 Protein denotes IL-8
T6140 49-55 Protein denotes IL-1RA
T6139 40-44 Protein denotes IL-8
R3853 T6139 T6199 themeOf IL-8,GP-induced
R3858 T6139 T6200 themeOf IL-8,productions
R3859 T6143 T6201 themeOf IL-8,induced
R3863 T6144 T6201 themeOf IL-1RA,induced

DLUT931

Id Subject Object Predicate Lexical cue
T6353 279-285 Protein denotes IL-1RA
T6352 270-274 Protein denotes IL-8
T6351 159-165 Protein denotes IL-1RA
T6350 150-154 Protein denotes IL-8
T6349 49-55 Protein denotes IL-1RA
T6348 40-44 Protein denotes IL-8
T6408 244-251 Positive_regulation denotes induced
T6407 29-39 Positive_regulation denotes GP-induced
T6406 56-67 Gene_expression denotes productions
R3922 T6348 T6406 themeOf IL-8,productions
R3924 T6349 T6406 themeOf IL-1RA,productions
R3927 T6352 T6408 themeOf IL-8,induced
R3931 T6353 T6408 themeOf IL-1RA,induced
R4002 T6406 T6407 themeOf productions,GP-induced
R4003 T6406 T6407 themeOf productions,GP-induced

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7610 159-165 Protein denotes IL-1RA
T7590 100-104 Entity denotes 24 h
T7588 150-154 Protein denotes IL-8
T7585 307-308 Entity denotes p
T7580 279-285 Protein denotes IL-1RA
T7573 300-301 Entity denotes n
T7565 49-55 Protein denotes IL-1RA
T7553 296-298 Protein denotes GP
T7544 29-44 Protein denotes GP-induced IL-8
T7636 96-106 Protein denotes GP (24 h),
T7762 270-274 Protein denotes IL-8

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T7170 349-350 . denotes .
T7169 348-349 -RRB- denotes )
T7168 336-348 RB denotes respectively
T7167 334-335 , denotes ,
T7166 330-334 CD denotes 0.98
T7165 326-329 CC denotes and
T7164 322-325 CD denotes 0.9
T7163 320-321 SYM denotes =
T7162 318-319 NN denotes r
T7161 316-317 , denotes ,
T7160 311-316 CD denotes 0.002
T7159 309-310 NN denotes ≤
T7158 307-308 NN denotes p
T7157 305-306 , denotes ,
T7156 304-305 CD denotes 5
T7155 302-303 SYM denotes =
T7154 300-301 FW denotes n
T7153 299-300 -LRB- denotes (
T7152 296-298 NNP denotes GP
T7151 293-295 NN denotes μg
T7150 291-292 CD denotes 1
T7149 286-290 IN denotes than
T7148 279-285 NN denotes IL-1RA
T7147 275-278 CC denotes and
T7146 270-274 NN denotes IL-8
T7145 267-269 IN denotes of
T7144 259-266 NNS denotes amounts
T7143 252-258 JJR denotes larger
T7142 244-251 VBD denotes induced
T7141 241-243 NNP denotes GP
T7140 238-240 IN denotes of
T7139 235-237 NN denotes μg
T7138 231-234 CD denotes 100
T7137 225-230 IN denotes since
T7136 223-224 , denotes ,
T7135 209-223 JJ denotes dose-dependent
T7134 206-208 VB denotes be
T7133 203-205 TO denotes to
T7132 191-202 NN denotes correlation
T7131 186-190 DT denotes this
T7130 180-185 VBD denotes found
T7129 177-179 PRP denotes we
T7121 130-141 NN denotes correlation
T7120 121-129 JJ denotes positive
T7119 119-120 DT denotes a
T7118 110-118 VBD denotes observed
T7117 107-109 PRP denotes we
T7116 105-106 , denotes ,
T7115 104-105 -RRB- denotes )
T7114 103-104 NN denotes h
T7113 100-102 CD denotes 24
T7112 99-100 -LRB- denotes (
T7111 96-98 NNP denotes GP
T7110 91-95 IN denotes with
T7109 79-90 NN denotes stimulation
T7108 69-78 VBG denotes Following
T7107 67-68 . denotes .
T7106 56-67 NNS denotes productions
T7105 49-55 NN denotes IL-1RA
T7104 45-48 CC denotes and
T7103 40-44 NN denotes IL-8
T7102 29-39 JJ denotes GP-induced
T7101 21-28 IN denotes between
T7100 9-20 NN denotes correlation
T7099 0-8 JJ denotes Positive
T7123 150-154 NNP denotes IL-8
T7122 142-149 IN denotes between
T7128 175-176 , denotes ,
T7127 167-175 RB denotes Moreover
T7126 165-166 . denotes .
T7125 159-165 NNP denotes IL-1RA
T7124 155-158 CC denotes and
R4572 T7122 T7121 prep between,correlation
R4573 T7123 T7122 pobj IL-8,between
R4575 T7124 T7123 cc and,IL-8
R4577 T7125 T7123 conj IL-1RA,IL-8
R4578 T7126 T7118 punct .,observed
R4579 T7127 T7130 advmod Moreover,found
R4581 T7128 T7130 punct ",",found
R4585 T7129 T7130 nsubj we,found
R4587 T7130 T7130 ROOT found,found
R4588 T7131 T7132 det this,correlation
R4590 T7132 T7130 dobj correlation,found
R4591 T7133 T7134 aux to,be
R4592 T7134 T7130 ccomp be,found
R4593 T7135 T7134 acomp dose-dependent,be
R4594 T7136 T7134 punct ",",be
R4595 T7137 T7142 mark since,induced
R4597 T7138 T7139 nummod 100,μg
R4598 T7139 T7142 nsubj μg,induced
R4599 T7140 T7139 prep of,μg
R4601 T7141 T7140 pobj GP,of
R4602 T7142 T7134 advcl induced,be
R4603 T7143 T7144 amod larger,amounts
R4604 T7144 T7142 dobj amounts,induced
R4606 T7145 T7144 prep of,amounts
R4607 T7146 T7145 pobj IL-8,of
R4609 T7147 T7146 cc and,IL-8
R4610 T7148 T7146 conj IL-1RA,IL-8
R4611 T7149 T7142 prep than,induced
R4613 T7150 T7151 nummod 1,μg
R4614 T7151 T7152 compound μg,GP
R4615 T7152 T7149 pobj GP,than
R4617 T7153 T7152 punct (,GP
R4618 T7154 T7158 dep n,p
R4619 T7155 T7156 punct =,5
R4621 T7156 T7154 prep 5,n
R4622 T7157 T7158 punct ",",p
R4625 T7158 T7159 compound p,≤
R4627 T7159 T7152 appos ≤,GP
R4628 T7160 T7159 appos 0.002,≤
R4630 T7161 T7152 punct ",",GP
R4631 T7162 T7152 appos r,GP
R4632 T7163 T7164 punct =,0.9
R4634 T7164 T7162 nummod 0.9,r
R4635 T7165 T7162 cc and,r
R4637 T7166 T7162 conj 0.98,r
R4638 T7167 T7166 punct ",",0.98
R4640 T7168 T7162 conj respectively,r
R4641 T7169 T7152 punct ),GP
R4642 T7170 T7130 punct .,found
R4712 T7099 T7100 amod Positive,correlation
R4714 T7100 T7100 ROOT correlation,correlation
R4715 T7101 T7100 prep between,correlation
R4716 T7102 T7103 amod GP-induced,IL-8
R4719 T7103 T7106 nmod IL-8,productions
R4723 T7104 T7103 cc and,IL-8
R4727 T7105 T7106 compound IL-1RA,productions
R4731 T7106 T7101 pobj productions,between
R4732 T7107 T7100 punct .,correlation
R4734 T7108 T7118 prep Following,observed
R4738 T7109 T7108 pobj stimulation,Following
R4745 T7110 T7109 prep with,stimulation
R4749 T7111 T7110 pobj GP,with
R4753 T7112 T7114 punct (,h
R4757 T7113 T7114 nummod 24,h
R4761 T7114 T7111 appos h,GP
R4765 T7115 T7111 punct ),GP
R4769 T7116 T7118 punct ",",observed
R4772 T7117 T7118 nsubj we,observed
R4776 T7118 T7118 ROOT observed,observed
R4780 T7119 T7121 det a,correlation
R4785 T7120 T7121 amod positive,correlation
R4788 T7121 T7118 dobj correlation,observed

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6268 270-274 Protein denotes IL-8
T6267 159-165 Protein denotes IL-1RA
T6266 150-154 Protein denotes IL-8
T6265 29-39 Positive_regulation denotes GP-induced
T6264 29-39 Positive_regulation denotes GP-induced
T6263 56-67 Gene_expression denotes productions
T6262 56-67 Gene_expression denotes productions
T6260 40-44 Protein denotes IL-8
T6261 49-55 Protein denotes IL-1RA
T6271 244-251 Positive_regulation denotes induced
T6270 244-251 Positive_regulation denotes induced
T6269 279-285 Protein denotes IL-1RA
R3911 T6260 T6262 themeOf IL-8,productions
R3912 T6261 T6263 themeOf IL-1RA,productions
R3913 T6262 T6264 themeOf productions,GP-induced
R3914 T6263 T6265 themeOf productions,GP-induced
R3917 T6268 T6270 themeOf IL-8,induced
R3875 T6269 T6271 themeOf IL-1RA,induced

testone

Id Subject Object Predicate Lexical cue
T4457 279-285 Protein denotes IL-1RA
T4456 270-274 Protein denotes IL-8
T4455 159-165 Protein denotes IL-1RA
T4454 150-154 Protein denotes IL-8
T4453 49-55 Protein denotes IL-1RA
T4452 40-44 Protein denotes IL-8
T4517 244-251 Positive_regulation denotes induced
T4516 214-223 Regulation denotes dependent
T4515 56-67 Gene_expression denotes productions
T4514 32-39 Positive_regulation denotes induced
R2746 T4452 T4515 themeOf IL-8,productions
R2747 T4453 T4515 themeOf IL-1RA,productions
R2748 T4457 T4517 themeOf IL-1RA,induced
R2783 T4515 T4514 themeOf productions,induced

test3

Id Subject Object Predicate Lexical cue
T4578 279-285 Protein denotes IL-1RA
T4577 270-274 Protein denotes IL-8
T4576 159-165 Protein denotes IL-1RA
T4575 150-154 Protein denotes IL-8
T4574 49-55 Protein denotes IL-1RA
T4573 40-44 Protein denotes IL-8
T4681 279-285 Protein denotes IL-1RA
T4680 270-274 Protein denotes IL-8
T4679 244-251 Positive_regulation denotes induced
T4678 159-165 Protein denotes IL-1RA
T4677 150-154 Protein denotes IL-8
T4676 49-55 Protein denotes IL-1RA
T4675 40-44 Protein denotes IL-8
T4674 32-39 Positive_regulation denotes induced
R2839 T4680 T4679 themeOf IL-8,induced
R2840 T4681 T4679 themeOf IL-1RA,induced