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PMC:1472690 / 13402-13723 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T5508 319-320 -RRB- denotes )
T5507 313-319 NN denotes detail
T5506 310-312 IN denotes in
T5505 304-309 VB denotes shown
T5504 300-303 RB denotes not
T5503 295-299 NN denotes data
T5502 294-295 -LRB- denotes (
T5501 292-293 -COMMA- denotes ,
T5500 291-292 -RRB- denotes )
T5499 287-291 CD denotes 0.02
T5498 285-286 SYM denotes =
T5497 283-284 NN denotes p
T5496 278-282 CC denotes both
T5495 276-277 -COLON- denotes ;
T5494 275-276 CD denotes 5
T5493 273-274 SYM denotes =
T5492 271-272 NN denotes n
T5491 270-271 -LRB- denotes (
T5490 268-269 NN denotes %
T5489 266-268 CD denotes 40
T5488 260-265 RB denotes about
T5487 257-259 IN denotes by
T5486 255-256 NN denotes h
T5485 252-254 CD denotes 24
T5484 249-251 IN denotes at
T5483 238-248 RB denotes especially
T5482 236-237 -COMMA- denotes ,
T5481 231-236 NN denotes calc.
T5480 221-230 NN denotes GP/TSST-1
T5479 218-220 CC denotes or
T5478 211-217 NN denotes TSST-1
T5477 208-210 TO denotes to
T5476 199-207 VB denotes compared
T5475 194-198 WRB denotes when
T5474 187-193 NN denotes TSST-1
T5473 185-186 SYM denotes +
T5472 182-184 NN denotes GP
T5471 178-181 IN denotes for
T5470 167-177 NN denotes production
T5469 162-166 NN denotes IL-6
T5468 152-161 VB denotes decreased
T5467 150-151 DT denotes a
T5466 141-149 VB denotes observed
T5465 138-140 PRP denotes we
T5464 136-137 -COMMA- denotes ,
T5463 128-136 NN denotes contrary
T5462 124-127 DT denotes the
T5461 121-123 IN denotes On
T5460 117-119 NN denotes GP
T5459 114-116 IN denotes by
T5458 103-113 NN denotes production
T5457 98-102 NN denotes IL-6
T5456 86-97 JJ denotes LPS-induced
T5455 82-85 DT denotes the
T5454 79-81 IN denotes of
T5453 68-78 NN denotes alteration
T5452 56-67 JJ denotes significant
T5451 53-55 DT denotes no
T5450 49-52 VB denotes was
T5449 43-48 EX denotes there
T5448 39-42 CC denotes and
T5447 34-38 NN denotes IL-6
T5446 31-33 IN denotes of
T5445 24-30 NN denotes amount
T5444 18-23 JJ denotes small
T5443 16-17 DT denotes a
T5442 11-15 RB denotes only
T5441 3-10 VB denotes induced
T5440 0-2 NN denotes GP
R3225 T5440 T5441 arg1Of GP,induced
R3226 T5441 T5448 arg1Of induced,and
R3227 T5445 T5441 arg2Of amount,induced
R3228 T5445 T5442 arg1Of amount,only
R3229 T5445 T5443 arg1Of amount,a
R3230 T5445 T5444 arg1Of amount,small
R3231 T5445 T5446 arg1Of amount,of
R3232 T5447 T5446 arg2Of IL-6,of
R3233 T5449 T5450 arg1Of there,was
R3234 T5450 T5448 arg2Of was,and
R3235 T5453 T5450 arg2Of alteration,was
R3236 T5453 T5451 arg1Of alteration,no
R3237 T5453 T5452 arg1Of alteration,significant
R3238 T5453 T5454 arg1Of alteration,of
R3239 T5453 T5459 arg1Of alteration,by
R3240 T5458 T5454 arg2Of production,of
R3241 T5458 T5455 arg1Of production,the
R3242 T5458 T5456 arg1Of production,LPS-induced
R3243 T5458 T5457 arg1Of production,IL-6
R3244 T5460 T5459 arg2Of GP,by
R3245 T5463 T5461 arg2Of contrary,On
R3246 T5463 T5462 arg1Of contrary,the
R3247 T5465 T5466 arg1Of we,observed
R3248 T5465 T5476 arg1Of we,compared
R3249 T5466 T5461 arg1Of observed,On
R3250 T5466 T5464 arg1Of observed,","
R3251 T5466 T5475 arg1Of observed,when
R3252 T5466 T5482 arg1Of observed,","
R3253 T5466 T5484 arg1Of observed,at
R3254 T5470 T5466 arg2Of production,observed
R3255 T5470 T5467 arg1Of production,a
R3256 T5470 T5468 arg2Of production,decreased
R3257 T5470 T5469 arg1Of production,IL-6
R3258 T5470 T5471 arg1Of production,for
R3259 T5474 T5471 arg2Of TSST-1,for
R3260 T5474 T5472 arg1Of TSST-1,GP
R3261 T5474 T5473 arg1Of TSST-1,+
R3262 T5476 T5475 arg2Of compared,when
R3263 T5476 T5477 arg1Of compared,to
R3264 T5478 T5479 arg1Of TSST-1,or
R3265 T5480 T5479 arg2Of GP/TSST-1,or
R3266 T5481 T5477 arg2Of calc.,to
R3267 T5481 T5478 arg1Of calc.,TSST-1
R3268 T5481 T5480 arg1Of calc.,GP/TSST-1
R3269 T5484 T5483 arg1Of at,especially
R3270 T5486 T5484 arg2Of h,at
R3271 T5486 T5485 arg1Of h,24
R3272 T5486 T5487 arg1Of h,by
R3273 T5486 T5501 arg1Of h,","
R3274 T5486 T5502 arg1Of h,(
R3275 T5489 T5488 arg1Of 40,about
R3276 T5490 T5487 arg2Of %,by
R3277 T5490 T5489 arg1Of %,40
R3278 T5490 T5491 arg1Of %,(
R3279 T5496 T5495 arg1Of both,;
R3280 T5497 T5491 arg2Of p,(
R3281 T5497 T5492 arg1Of p,n
R3282 T5497 T5493 arg1Of p,=
R3283 T5497 T5494 arg1Of p,5
R3284 T5497 T5496 arg1Of p,both
R3285 T5497 T5498 arg1Of p,=
R3286 T5497 T5499 arg1Of p,0.02
R3287 T5500 T5491 arg3Of ),(
R3288 T5503 T5502 arg2Of data,(
R3289 T5503 T5505 arg2Of data,shown
R3290 T5505 T5504 arg1Of shown,not
R3291 T5505 T5506 arg1Of shown,in
R3292 T5507 T5506 arg2Of detail,in
R3293 T5508 T5502 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4947 224-230 Protein denotes TSST-1
T4946 211-217 Protein denotes TSST-1
T4945 187-193 Protein denotes TSST-1
T4944 162-166 Protein denotes IL-6
T4943 98-102 Protein denotes IL-6
T4942 34-38 Protein denotes IL-6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T6071 162-166 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T6070 98-102 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T6069 34-38 http://www.uniprot.org/uniprot/P05231 denotes IL-6
T6034 224-230 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T6033 211-217 http://www.uniprot.org/uniprot/P06886 denotes TSST-1
T6032 187-193 http://www.uniprot.org/uniprot/P06886 denotes TSST-1

GO-BP

Id Subject Object Predicate Lexical cue
T4761 98-113 http://purl.obolibrary.org/obo/GO_0032675 denotes IL-6 production
T4760 162-177 http://purl.obolibrary.org/obo/GO_0032635 denotes IL-6 production
T4759 98-113 http://purl.obolibrary.org/obo/GO_0032635 denotes IL-6 production
T4762 162-177 http://purl.obolibrary.org/obo/GO_0032675 denotes IL-6 production

GO-MF

Id Subject Object Predicate Lexical cue
T5011 162-166 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T5010 98-102 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6
T5009 34-38 http://purl.obolibrary.org/obo/GO_0005138 denotes IL-6

sentences

Id Subject Object Predicate Lexical cue
T4730 121-321 Sentence denotes On the contrary, we observed a decreased IL-6 production for GP + TSST-1 when compared to TSST-1 or GP/TSST-1 calc., especially at 24 h by about 40% (n = 5; both p = 0.02), (data not shown in detail).
T4729 0-120 Sentence denotes GP induced only a small amount of IL-6 and there was no significant alteration of the LPS-induced IL-6 production by GP.
T102 0-120 Sentence denotes GP induced only a small amount of IL-6 and there was no significant alteration of the LPS-induced IL-6 production by GP.
T103 121-321 Sentence denotes On the contrary, we observed a decreased IL-6 production for GP + TSST-1 when compared to TSST-1 or GP/TSST-1 calc., especially at 24 h by about 40% (n = 5; both p = 0.02), (data not shown in detail).

simple1

Id Subject Object Predicate Lexical cue
T5124 224-230 Protein denotes TSST-1
T5123 211-217 Protein denotes TSST-1
T5122 187-193 Protein denotes TSST-1
T5121 162-166 Protein denotes IL-6
T5120 98-102 Protein denotes IL-6
T5119 34-38 Protein denotes IL-6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T7733 152-161 Negative_regulation denotes decreased
T7732 167-177 Gene_expression denotes production
T7731 103-113 Gene_expression denotes production
T7730 3-10 Positive_regulation denotes induced
T7729 68-78 Regulation denotes alteration
T7728 86-97 Positive_regulation denotes LPS-induced
T7671 224-230 Protein denotes TSST-1
T7670 211-217 Protein denotes TSST-1
T7669 187-193 Protein denotes TSST-1
T7668 162-166 Protein denotes IL-6
T7667 98-102 Protein denotes IL-6
T7666 34-38 Protein denotes IL-6
R5004 T7666 T7730 themeOf IL-6,induced
R5005 T7667 T7731 themeOf IL-6,production
R5009 T7668 T7732 themeOf IL-6,production
R5012 T7669 T7732 themeOf TSST-1,production
R5022 T7731 T7729 themeOf production,alteration
R5023 T7731 T7728 themeOf production,LPS-induced
R5024 T7732 T7733 themeOf production,decreased
R5025 T7732 T7733 themeOf production,decreased

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T6183 152-161 Negative_regulation denotes decreased
T6182 167-177 Gene_expression denotes production
T6181 3-10 Positive_regulation denotes induced
T6180 103-113 Gene_expression denotes production
T6121 224-230 Protein denotes TSST-1
T6120 211-217 Protein denotes TSST-1
T6119 187-193 Protein denotes TSST-1
T6118 162-166 Protein denotes IL-6
T6117 98-102 Protein denotes IL-6
T6116 34-38 Protein denotes IL-6
T6179 86-97 Positive_regulation denotes LPS-induced
T6178 68-78 Regulation denotes alteration
R3817 T6116 T6181 themeOf IL-6,induced
R3820 T6117 T6180 themeOf IL-6,production
R3822 T6118 T6182 themeOf IL-6,production
R3823 T6119 T6182 themeOf TSST-1,production
R3842 T6179 T6178 themeOf LPS-induced,alteration
R3843 T6180 T6178 themeOf production,alteration
R3844 T6180 T6179 themeOf production,LPS-induced
R3846 T6182 T6183 themeOf production,decreased
R3847 T6182 T6183 themeOf production,decreased

DLUT931

Id Subject Object Predicate Lexical cue
T6387 86-97 Positive_regulation denotes LPS-induced
T6386 103-113 Gene_expression denotes production
T6385 3-10 Positive_regulation denotes induced
T6330 224-230 Protein denotes TSST-1
T6329 211-217 Protein denotes TSST-1
T6328 187-193 Protein denotes TSST-1
T6327 162-166 Protein denotes IL-6
T6326 98-102 Protein denotes IL-6
T6325 34-38 Protein denotes IL-6
T6390 152-161 Negative_regulation denotes decreased
T6389 167-177 Gene_expression denotes production
T6388 68-78 Regulation denotes alteration
R3932 T6325 T6385 themeOf IL-6,induced
R3933 T6326 T6386 themeOf IL-6,production
R3935 T6327 T6389 themeOf IL-6,production
R3936 T6328 T6389 themeOf TSST-1,production
R3963 T6386 T6387 themeOf production,LPS-induced
R3966 T6387 T6388 themeOf LPS-induced,alteration
R3970 T6389 T6390 themeOf production,decreased
R3971 T6389 T6390 themeOf production,decreased

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T7804 79-119 Gene_expression denotes of the LPS-induced IL-6 production by GP
T7591 211-217 Protein denotes TSST-1
T7586 187-193 Protein denotes TSST-1
T7579 224-230 Protein denotes TSST-1
T7569 34-38 Protein denotes IL-6
T7550 255-320 Entity denotes h by about 40% (n = 5; both p = 0.02), (data not shown in detail)
T7539 0-10 Protein denotes GP induced
T7525 98-102 Protein denotes IL-6
T7522 162-166 Protein denotes IL-6
T7516 114-119 Protein denotes by GP
T7508 86-97 Entity denotes LPS-induced
T7789 53-119 Regulation denotes no significant alteration of the LPS-induced IL-6 production by GP
T7788 150-184 Negative_regulation denotes a decreased IL-6 production for GP
T7787 121-184 Gene_expression denotes On the contrary, we observed a decreased IL-6 production for GP
R4950 T7522 T7787 themeOf IL-6,"On the contrary, we observed a decreased IL-6 production for GP"
R4952 T7525 T7804 themeOf IL-6,of the LPS-induced IL-6 production by GP
R5053 T7787 T7788 themeOf "On the contrary, we observed a decreased IL-6 production for GP",a decreased IL-6 production for GP
R5056 T7804 T7789 themeOf of the LPS-induced IL-6 production by GP,no significant alteration of the LPS-induced IL-6 production by GP

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T6871 320-321 . denotes .
T6870 319-320 -RRB- denotes )
T6869 313-319 NN denotes detail
T6868 310-312 IN denotes in
T6867 304-309 VBN denotes shown
T6866 300-303 RB denotes not
T6865 295-299 NNS denotes data
T6864 294-295 -LRB- denotes (
T6863 292-293 , denotes ,
T6862 291-292 -RRB- denotes )
T6861 287-291 CD denotes 0.02
T6860 285-286 SYM denotes =
T6859 283-284 VBP denotes p
T6858 278-282 DT denotes both
T6857 276-277 : denotes ;
T6856 275-276 CD denotes 5
T6855 273-274 SYM denotes =
T6854 271-272 FW denotes n
T6853 270-271 -LRB- denotes (
T6852 268-269 NN denotes %
T6851 266-268 CD denotes 40
T6850 260-265 RB denotes about
T6849 257-259 IN denotes by
T6848 255-256 NN denotes h
T6847 252-254 CD denotes 24
T6846 249-251 IN denotes at
T6845 238-248 RB denotes especially
T6844 236-237 , denotes ,
T6843 231-236 NN denotes calc.
T6842 228-230 CD denotes -1
T6841 221-228 NNP denotes GP/TSST
T6840 218-220 CC denotes or
T6839 211-217 CD denotes TSST-1
T6838 208-210 TO denotes to
T6837 199-207 VBN denotes compared
T6836 194-198 WRB denotes when
T6835 187-193 NNP denotes TSST-1
T6834 185-186 NNP denotes +
T6833 182-184 NNP denotes GP
T6832 178-181 IN denotes for
T6831 167-177 NN denotes production
T6830 162-166 NN denotes IL-6
T6829 152-161 VBN denotes decreased
T6828 150-151 DT denotes a
T6827 141-149 VBD denotes observed
T6826 138-140 PRP denotes we
T6825 136-137 , denotes ,
T6824 128-136 NN denotes contrary
T6823 124-127 DT denotes the
T6822 121-123 IN denotes On
T6821 119-120 . denotes .
T6820 117-119 NNP denotes GP
T6819 114-116 IN denotes by
T6818 103-113 NN denotes production
T6817 98-102 NN denotes IL-6
T6816 86-97 JJ denotes LPS-induced
T6815 82-85 DT denotes the
T6814 79-81 IN denotes of
T6813 68-78 NN denotes alteration
T6812 56-67 JJ denotes significant
T6811 53-55 DT denotes no
T6810 49-52 VBD denotes was
T6809 43-48 EX denotes there
T6808 39-42 CC denotes and
T6807 34-38 NN denotes IL-6
T6806 31-33 IN denotes of
T6805 24-30 NN denotes amount
T6804 18-23 JJ denotes small
T6803 16-17 DT denotes a
T6802 11-15 RB denotes only
T6801 3-10 VBD denotes induced
T6800 0-2 NNP denotes GP
R4261 T6800 T6801 nsubj GP,induced
R4263 T6801 T6801 ROOT induced,induced
R4264 T6802 T6805 advmod only,amount
R4265 T6803 T6805 det a,amount
R4267 T6804 T6805 amod small,amount
R4268 T6805 T6801 dobj amount,induced
R4269 T6806 T6805 prep of,amount
R4271 T6807 T6806 pobj IL-6,of
R4272 T6808 T6801 cc and,induced
R4273 T6809 T6810 expl there,was
R4275 T6810 T6801 conj was,induced
R4276 T6811 T6813 det no,alteration
R4277 T6812 T6813 amod significant,alteration
R4278 T6813 T6810 attr alteration,was
R4279 T6814 T6813 prep of,alteration
R4281 T6815 T6818 det the,production
R4282 T6816 T6818 amod LPS-induced,production
R4283 T6817 T6818 compound IL-6,production
R4285 T6818 T6814 pobj production,of
R4286 T6819 T6818 prep by,production
R4287 T6820 T6819 pobj GP,by
R4288 T6821 T6810 punct .,was
R4289 T6822 T6827 prep On,observed
R4290 T6823 T6824 det the,contrary
R4291 T6824 T6822 pobj contrary,On
R4293 T6825 T6827 punct ",",observed
R4294 T6826 T6827 nsubj we,observed
R4295 T6827 T6859 ccomp observed,p
R4296 T6828 T6831 det a,production
R4298 T6829 T6831 amod decreased,production
R4299 T6830 T6831 compound IL-6,production
R4303 T6831 T6827 dobj production,observed
R4304 T6832 T6831 prep for,production
R4306 T6833 T6835 compound GP,TSST-1
R4307 T6834 T6835 compound +,TSST-1
R4308 T6835 T6832 pobj TSST-1,for
R4310 T6836 T6837 advmod when,compared
R4311 T6837 T6827 advcl compared,observed
R4312 T6838 T6837 prep to,compared
R4314 T6839 T6838 pobj TSST-1,to
R4315 T6840 T6839 cc or,TSST-1
R4316 T6841 T6843 nmod GP/TSST,calc.
R4317 T6842 T6843 nummod -1,calc.
R4319 T6843 T6839 conj calc.,TSST-1
R4320 T6844 T6843 punct ",",calc.
R4321 T6845 T6846 advmod especially,at
R4325 T6846 T6837 prep at,compared
R4326 T6847 T6848 nummod 24,h
R4327 T6848 T6846 pobj h,at
R4329 T6849 T6848 prep by,h
R4330 T6850 T6851 advmod about,40
R4331 T6851 T6852 nummod 40,%
R4333 T6852 T6849 pobj %,by
R4334 T6853 T6856 punct (,5
R4336 T6854 T6856 advmod n,5
R4337 T6855 T6856 punct =,5
R4339 T6856 T6848 npadvmod 5,h
R4340 T6857 T6859 punct ;,p
R4341 T6858 T6859 nsubj both,p
R4342 T6859 T6859 ROOT p,p
R4343 T6860 T6861 punct =,0.02
R4344 T6861 T6859 prep 0.02,p
R4345 T6862 T6859 punct ),p
R4347 T6863 T6859 punct ",",p
R4348 T6864 T6865 punct (,data
R4349 T6865 T6859 parataxis data,p
R4351 T6866 T6867 neg not,shown
R4352 T6867 T6865 acl shown,data
R4353 T6868 T6867 prep in,shown
R4354 T6869 T6868 pobj detail,in
R4356 T6870 T6865 punct ),data
R4357 T6871 T6859 punct .,p

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T6244 152-161 Negative_regulation denotes decreased
T6243 167-177 Gene_expression denotes production
T6242 211-217 Protein denotes TSST-1
T6241 162-166 Protein denotes IL-6
T6240 68-78 Regulation denotes alteration
T6239 86-97 Positive_regulation denotes LPS-induced
T6238 103-113 Gene_expression denotes production
T6237 3-10 Positive_regulation denotes induced
T6236 98-102 Protein denotes IL-6
T6235 34-38 Protein denotes IL-6
R3892 T6235 T6237 themeOf IL-6,induced
R3893 T6236 T6238 themeOf IL-6,production
R3894 T6238 T6239 themeOf production,LPS-induced
R3895 T6239 T6240 themeOf LPS-induced,alteration
R3897 T6241 T6243 themeOf IL-6,production
R3899 T6243 T6244 themeOf production,decreased

testone

Id Subject Object Predicate Lexical cue
T4434 224-230 Protein denotes TSST-1
T4433 211-217 Protein denotes TSST-1
T4432 187-193 Protein denotes TSST-1
T4431 162-166 Protein denotes IL-6
T4430 98-102 Protein denotes IL-6
T4429 34-38 Protein denotes IL-6
T4497 167-177 Gene_expression denotes production
T4496 152-161 Negative_regulation denotes decreased
T4495 103-113 Gene_expression denotes production
T4494 90-97 Positive_regulation denotes induced
T4493 68-78 Negative_regulation denotes alteration
T4492 3-10 Positive_regulation denotes induced
R2726 T4430 T4495 themeOf IL-6,production
R2727 T4431 T4497 themeOf IL-6,production
R2728 T4432 T4496 causeOf TSST-1,decreased
R2729 T4433 T4496 causeOf TSST-1,decreased
R2771 T4494 T4493 themeOf induced,alteration
R2772 T4495 T4494 themeOf production,induced
R2773 T4497 T4496 themeOf production,decreased

test3

Id Subject Object Predicate Lexical cue
T4642 224-230 Protein denotes TSST-1
T4641 211-217 Protein denotes TSST-1
T4640 187-193 Protein denotes TSST-1
T4639 167-177 Gene_expression denotes production
T4638 162-166 Protein denotes IL-6
T4637 152-161 Negative_regulation denotes decreased
T4636 103-113 Gene_expression denotes production
T4635 98-102 Protein denotes IL-6
T4634 90-97 Positive_regulation denotes induced
T4633 68-78 Negative_regulation denotes alteration
T4632 34-38 Protein denotes IL-6
T4631 3-10 Positive_regulation denotes induced
T4555 224-230 Protein denotes TSST-1
T4554 211-217 Protein denotes TSST-1
T4553 187-193 Protein denotes TSST-1
T4552 162-166 Protein denotes IL-6
T4551 98-102 Protein denotes IL-6
T4550 34-38 Protein denotes IL-6
R2806 T4632 T4631 themeOf IL-6,induced
R2807 T4635 T4636 themeOf IL-6,production
R2808 T4636 T4634 themeOf production,induced
R2809 T4638 T4639 themeOf IL-6,production
R2810 T4639 T4637 themeOf production,decreased