PMC:1459172 / 22125-22770 JSONTXT

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1459172","sourcedb":"PMC","sourceid":"1459172","source_url":"https://www.ncbi.nlm.nih.gov/pmc/1459172","text":"The presentation in this section closely follows a recent paper by Dimitrov [27], albeit we use here slightly different definitions of the partitions functions. The partition functions of the secondary structures of the monomeric states are ZA and ZB, respectively, as introduced in the previous section. In contrast to [27], we include the unfolded states in these partition functions. The partition functions ZAA, ZBB, and ZAB, which are the output of the RNAcofold algorithm (denoted Z in the previous section), include those states in which each monomer forms base-pairs only within itself as well as the unfolded monomers. We can now define","tracks":[{"project":"2_test","denotations":[{"id":"16722605-15240459-1692563","span":{"begin":77,"end":79},"obj":"15240459"},{"id":"16722605-15240459-1692564","span":{"begin":321,"end":323},"obj":"15240459"}],"attributes":[{"subj":"16722605-15240459-1692563","pred":"source","obj":"2_test"},{"subj":"16722605-15240459-1692564","pred":"source","obj":"2_test"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"2_test","color":"#ec93ea","default":true}]}]}}