> top > docs > PMC:1448208 > spans > 8797-10266 > annotations

PMC:1448208 / 8797-10266 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T22055 0-2 NN denotes E2
T22056 23-33 NN denotes production
T22057 3-7 NN denotes gene
T22058 8-16 NN denotes knockout
T22059 17-22 NN denotes mouse
T22060 33-34 . denotes .
T22061 34-112 sentence denotes A, Gene targeting strategy used for targeting the E2 locus in mouse ES cells.
T22062 35-36 LS denotes A
T22063 53-61 NN denotes strategy
T22064 36-38 , denotes ,
T22065 38-42 NN denotes Gene
T22066 43-52 NN denotes targeting
T22067 62-66 VBN denotes used
T22068 67-70 IN denotes for
T22069 71-80 VBG denotes targeting
T22070 81-84 DT denotes the
T22071 88-93 NN denotes locus
T22072 85-87 NN denotes E2
T22073 94-96 IN denotes in
T22074 97-102 NN denotes mouse
T22075 106-111 NNS denotes cells
T22076 103-105 NN denotes ES
T22077 111-112 . denotes .
T22078 112-240 sentence denotes The targeting construct was designed to delete 1.67 kb of sequence between an EcoRV site in Exon 4 and a Smal site in intron 5.
T22079 113-116 DT denotes The
T22080 127-136 NN denotes construct
T22081 117-126 NN denotes targeting
T22082 141-149 VBN denotes designed
T22083 137-140 VBD denotes was
T22084 150-152 TO denotes to
T22085 153-159 VB denotes delete
T22086 160-164 CD denotes 1.67
T22087 165-167 NN denotes kb
T22088 168-170 IN denotes of
T22089 171-179 NN denotes sequence
T22090 180-187 IN denotes between
T22091 188-190 DT denotes an
T22092 197-201 NN denotes site
T22093 191-196 NN denotes EcoRV
T22094 202-204 IN denotes in
T22095 205-209 NN denotes Exon
T22096 210-211 CD denotes 4
T22097 212-215 CC denotes and
T22098 216-217 DT denotes a
T22099 223-227 NN denotes site
T22100 218-222 NN denotes Smal
T22101 228-230 IN denotes in
T22102 231-237 NN denotes intron
T22103 238-239 CD denotes 5
T22104 239-240 . denotes .
T22105 240-353 sentence denotes The wild type E2 gene contains an ~16 kb BglI restriction fragment that hybridizes to the Exon 6 specific probe.
T22106 241-244 DT denotes The
T22107 258-262 NN denotes gene
T22108 245-249 JJ denotes wild
T22109 250-254 NN denotes type
T22110 255-257 NN denotes E2
T22111 263-271 VBZ denotes contains
T22112 272-274 DT denotes an
T22113 299-307 NN denotes fragment
T22114 275-276 SYM denotes ~
T22115 276-278 CD denotes 16
T22116 279-281 NN denotes kb
T22117 282-286 NN denotes BglI
T22118 287-298 NN denotes restriction
T22119 308-312 WDT denotes that
T22120 313-323 VBZ denotes hybridizes
T22121 324-326 IN denotes to
T22122 327-330 DT denotes the
T22123 347-352 NN denotes probe
T22124 331-335 NN denotes Exon
T22125 338-346 JJ denotes specific
T22126 336-337 CD denotes 6
T22127 352-353 . denotes .
T22128 353-462 sentence denotes A correctly targeted E2 locus harbors an ~11 kb BglI restriction fragment that hybridizes to the same probe.
T22129 354-355 DT denotes A
T22130 378-383 NN denotes locus
T22131 356-365 RB denotes correctly
T22132 366-374 VBN denotes targeted
T22133 375-377 NN denotes E2
T22134 384-391 VBZ denotes harbors
T22135 392-394 DT denotes an
T22136 419-427 NN denotes fragment
T22137 395-396 SYM denotes ~
T22138 396-398 CD denotes 11
T22139 399-401 NN denotes kb
T22140 402-406 NN denotes BglI
T22141 407-418 NN denotes restriction
T22142 428-432 WDT denotes that
T22143 433-443 VBZ denotes hybridizes
T22144 444-446 IN denotes to
T22145 447-450 DT denotes the
T22146 456-461 NN denotes probe
T22147 451-455 JJ denotes same
T22148 461-462 . denotes .
T22149 462-589 sentence denotes Note that the probe will not detect random integration of the targeting vector because it is external to the targeting vector.
T22150 463-467 VB denotes Note
T22151 468-472 IN denotes that
T22152 492-498 VB denotes detect
T22153 473-476 DT denotes the
T22154 477-482 NN denotes probe
T22155 483-487 MD denotes will
T22156 488-491 RB denotes not
T22157 499-505 JJ denotes random
T22158 506-517 NN denotes integration
T22159 518-520 IN denotes of
T22160 521-524 DT denotes the
T22161 535-541 NN denotes vector
T22162 525-534 NN denotes targeting
T22163 542-549 IN denotes because
T22164 553-555 VBZ denotes is
T22165 550-552 PRP denotes it
T22166 556-564 JJ denotes external
T22167 565-567 IN denotes to
T22168 568-571 DT denotes the
T22169 582-588 NN denotes vector
T22170 572-581 NN denotes targeting
T22171 588-589 . denotes .
T22172 589-824 sentence denotes B, Southern blot analysis of Bgll digested genomic DNA derived from the parental wild type ES cell line (R1), a heterozygous targeted ES cell line (362), and from wild type (+/+), heterozygous (+/-) and homozygous knockout (-/-) mice.
T22173 590-591 LS denotes B
T22174 607-615 NN denotes analysis
T22175 591-593 , denotes ,
T22176 593-601 NNP denotes Southern
T22177 602-606 NN denotes blot
T22178 616-618 IN denotes of
T22179 619-623 NN denotes Bgll
T22180 624-632 VBN denotes digested
T22181 641-644 NN denotes DNA
T22182 633-640 JJ denotes genomic
T22183 645-652 VBN denotes derived
T22184 653-657 IN denotes from
T22185 658-661 DT denotes the
T22186 689-693 NN denotes line
T22187 662-670 JJ denotes parental
T22188 671-675 JJ denotes wild
T22189 676-680 NN denotes type
T22190 681-683 NN denotes ES
T22191 684-688 NN denotes cell
T22192 694-695 -LRB- denotes (
T22193 695-697 NN denotes R1
T22194 697-698 -RRB- denotes )
T22195 698-700 , denotes ,
T22196 700-701 DT denotes a
T22197 732-736 NN denotes line
T22198 702-714 JJ denotes heterozygous
T22199 715-723 VBN denotes targeted
T22200 724-726 NN denotes ES
T22201 727-731 NN denotes cell
T22202 737-738 -LRB- denotes (
T22203 738-741 CD denotes 362
T22204 741-742 -RRB- denotes )
T22205 742-744 , denotes ,
T22206 744-747 CC denotes and
T22207 748-752 IN denotes from
T22208 753-757 JJ denotes wild
T22209 758-762 NN denotes type
T22210 804-812 NN denotes knockout
T22211 763-764 -LRB- denotes (
T22212 766-767 SYM denotes +
T22213 764-765 SYM denotes +
T22214 765-766 HYPH denotes /
T22215 767-768 -RRB- denotes )
T22216 768-770 , denotes ,
T22217 770-782 JJ denotes heterozygous
T22218 783-784 -LRB- denotes (
T22219 786-787 SYM denotes -
T22220 784-785 SYM denotes +
T22221 785-786 HYPH denotes /
T22222 787-788 -RRB- denotes )
T22223 789-792 CC denotes and
T22224 793-803 JJ denotes homozygous
T22225 819-823 NNS denotes mice
T22226 813-814 -LRB- denotes (
T22227 816-817 SYM denotes -
T22228 814-815 SYM denotes -
T22229 815-816 HYPH denotes /
T22230 817-818 -RRB- denotes )
T22231 823-824 . denotes .
T22232 824-879 sentence denotes The blot was hybridized with an Exon 6 specific probe.
T22233 825-828 DT denotes The
T22234 829-833 NN denotes blot
T22235 838-848 VBN denotes hybridized
T22236 834-837 VBD denotes was
T22237 849-853 IN denotes with
T22238 854-856 DT denotes an
T22239 873-878 NN denotes probe
T22240 857-861 NN denotes Exon
T22241 864-872 JJ denotes specific
T22242 862-863 CD denotes 6
T22243 878-879 . denotes .
T22244 879-1011 sentence denotes C, Immunohistochemical analysis of fresh frozen liver sections from control (+/+) and E2 knockout (-/-) postnatal day 1 mouse pups.
T22245 880-881 LS denotes C
T22246 903-911 NN denotes analysis
T22247 881-883 , denotes ,
T22248 883-902 JJ denotes Immunohistochemical
T22249 912-914 IN denotes of
T22250 915-920 JJ denotes fresh
T22251 921-927 VBN denotes frozen
T22252 934-942 NNS denotes sections
T22253 928-933 NN denotes liver
T22254 943-947 IN denotes from
T22255 948-955 NN denotes control
T22256 969-977 NN denotes knockout
T22257 956-957 -LRB- denotes (
T22258 959-960 SYM denotes +
T22259 957-958 SYM denotes +
T22260 958-959 HYPH denotes /
T22261 960-961 -RRB- denotes )
T22262 962-965 CC denotes and
T22263 966-968 NN denotes E2
T22264 1006-1010 NNS denotes pups
T22265 978-979 -LRB- denotes (
T22266 981-982 SYM denotes -
T22267 979-980 SYM denotes -
T22268 980-981 HYPH denotes /
T22269 982-983 -RRB- denotes )
T22270 984-993 JJ denotes postnatal
T22271 994-997 NN denotes day
T22272 998-999 CD denotes 1
T22273 1000-1005 NN denotes mouse
T22274 1010-1011 . denotes .
T22275 1011-1106 sentence denotes Sections were stained for E2 using an E2 specific antibody (green) and a nuclear stain (blue).
T22276 1012-1020 NNS denotes Sections
T22277 1026-1033 VBN denotes stained
T22278 1021-1025 VBD denotes were
T22279 1034-1037 IN denotes for
T22280 1038-1040 NN denotes E2
T22281 1041-1046 VBG denotes using
T22282 1047-1049 DT denotes an
T22283 1062-1070 NN denotes antibody
T22284 1050-1052 NN denotes E2
T22285 1053-1061 JJ denotes specific
T22286 1071-1072 -LRB- denotes (
T22287 1072-1077 JJ denotes green
T22288 1077-1078 -RRB- denotes )
T22289 1079-1082 CC denotes and
T22290 1083-1084 DT denotes a
T22291 1093-1098 NN denotes stain
T22292 1085-1092 JJ denotes nuclear
T22293 1099-1100 -LRB- denotes (
T22294 1100-1104 JJ denotes blue
T22295 1104-1105 -RRB- denotes )
T22296 1105-1106 . denotes .
T22297 1106-1195 sentence denotes Note the complete absence of E2 immunoreactivity in the section from the knockout mouse.
T22298 1107-1111 VB denotes Note
T22299 1112-1115 DT denotes the
T22300 1125-1132 NN denotes absence
T22301 1116-1124 JJ denotes complete
T22302 1133-1135 IN denotes of
T22303 1136-1138 NN denotes E2
T22304 1139-1155 NN denotes immunoreactivity
T22305 1156-1158 IN denotes in
T22306 1159-1162 DT denotes the
T22307 1163-1170 NN denotes section
T22308 1171-1175 IN denotes from
T22309 1176-1179 DT denotes the
T22310 1189-1194 NN denotes mouse
T22311 1180-1188 NN denotes knockout
T22312 1194-1195 . denotes .
T22313 1195-1309 sentence denotes D, Similar results were observed upon immunohistochemical analysis of primary mouse embryonic fibroblasts (MEFs).
T22314 1196-1197 LS denotes D
T22315 1220-1228 VBN denotes observed
T22316 1197-1199 , denotes ,
T22317 1199-1206 JJ denotes Similar
T22318 1207-1214 NNS denotes results
T22319 1215-1219 VBD denotes were
T22320 1229-1233 IN denotes upon
T22321 1234-1253 JJ denotes immunohistochemical
T22322 1254-1262 NN denotes analysis
T22323 1263-1265 IN denotes of
T22324 1266-1273 JJ denotes primary
T22325 1290-1301 NNS denotes fibroblasts
T22326 1274-1279 NN denotes mouse
T22327 1280-1289 JJ denotes embryonic
T22328 1302-1303 -LRB- denotes (
T22329 1303-1307 NNS denotes MEFs
T22330 1307-1308 -RRB- denotes )
T22331 1308-1309 . denotes .
T22332 1309-1469 sentence denotes Note that the readily detectable signal for E2 in the control cells was present in a pattern characteristic of mitochondria, the subcellular location of BCKDH.
T22333 1310-1314 VB denotes Note
T22334 1315-1319 IN denotes that
T22335 1378-1381 VBD denotes was
T22336 1320-1323 DT denotes the
T22337 1343-1349 NN denotes signal
T22338 1324-1331 RB denotes readily
T22339 1332-1342 JJ denotes detectable
T22340 1350-1353 IN denotes for
T22341 1354-1356 NN denotes E2
T22342 1357-1359 IN denotes in
T22343 1360-1363 DT denotes the
T22344 1372-1377 NNS denotes cells
T22345 1364-1371 NN denotes control
T22346 1382-1389 JJ denotes present
T22347 1390-1392 IN denotes in
T22348 1393-1394 DT denotes a
T22349 1395-1402 NN denotes pattern
T22350 1403-1417 JJ denotes characteristic
T22351 1418-1420 IN denotes of
T22352 1421-1433 NNS denotes mitochondria
T22353 1433-1435 , denotes ,
T22354 1435-1438 DT denotes the
T22355 1451-1459 NN denotes location
T22356 1439-1450 JJ denotes subcellular
T22357 1460-1462 IN denotes of
T22358 1463-1468 NN denotes BCKDH
T22359 1468-1469 . denotes .
R6272 T22055 T22056 compound E2,production
R6273 T22057 T22058 compound gene,knockout
R6274 T22058 T22056 compound knockout,production
R6275 T22059 T22056 compound mouse,production
R6276 T22060 T22056 punct .,production
R6277 T22062 T22063 meta A,strategy
R6278 T22064 T22063 punct ", ",strategy
R6279 T22065 T22066 compound Gene,targeting
R6280 T22066 T22063 compound targeting,strategy
R6281 T22067 T22063 acl used,strategy
R6282 T22068 T22067 prep for,used
R6283 T22069 T22068 pcomp targeting,for
R6284 T22070 T22071 det the,locus
R6285 T22071 T22069 dobj locus,targeting
R6286 T22072 T22071 compound E2,locus
R6287 T22073 T22067 prep in,used
R6288 T22074 T22075 compound mouse,cells
R6289 T22075 T22073 pobj cells,in
R6290 T22076 T22075 compound ES,cells
R6291 T22077 T22063 punct .,strategy
R6292 T22079 T22080 det The,construct
R6293 T22080 T22082 nsubjpass construct,designed
R6294 T22081 T22080 compound targeting,construct
R6295 T22083 T22082 auxpass was,designed
R6296 T22084 T22085 aux to,delete
R6297 T22085 T22082 advcl delete,designed
R6298 T22086 T22087 nummod 1.67,kb
R6299 T22087 T22085 dobj kb,delete
R6300 T22088 T22087 prep of,kb
R6301 T22089 T22088 pobj sequence,of
R6302 T22090 T22085 prep between,delete
R6303 T22091 T22092 det an,site
R6304 T22092 T22090 pobj site,between
R6305 T22093 T22092 compound EcoRV,site
R6306 T22094 T22092 prep in,site
R6307 T22095 T22094 pobj Exon,in
R6308 T22096 T22095 nummod 4,Exon
R6309 T22097 T22092 cc and,site
R6310 T22098 T22099 det a,site
R6311 T22099 T22092 conj site,site
R6312 T22100 T22099 compound Smal,site
R6313 T22101 T22099 prep in,site
R6314 T22102 T22101 pobj intron,in
R6315 T22103 T22102 nummod 5,intron
R6316 T22104 T22082 punct .,designed
R6317 T22106 T22107 det The,gene
R6318 T22107 T22111 nsubj gene,contains
R6319 T22108 T22109 amod wild,type
R6320 T22109 T22107 compound type,gene
R6321 T22110 T22107 compound E2,gene
R6322 T22112 T22113 det an,fragment
R6323 T22113 T22111 dobj fragment,contains
R6324 T22114 T22115 punct ~,16
R6325 T22115 T22116 nummod 16,kb
R6326 T22116 T22113 compound kb,fragment
R6327 T22117 T22113 compound BglI,fragment
R6328 T22118 T22113 compound restriction,fragment
R6329 T22119 T22120 dep that,hybridizes
R6330 T22120 T22113 relcl hybridizes,fragment
R6331 T22121 T22120 prep to,hybridizes
R6332 T22122 T22123 det the,probe
R6333 T22123 T22121 pobj probe,to
R6334 T22124 T22125 npadvmod Exon,specific
R6335 T22125 T22123 amod specific,probe
R6336 T22126 T22124 nummod 6,Exon
R6337 T22127 T22111 punct .,contains
R6338 T22129 T22130 det A,locus
R6339 T22130 T22134 nsubj locus,harbors
R6340 T22131 T22132 advmod correctly,targeted
R6341 T22132 T22130 amod targeted,locus
R6342 T22133 T22130 compound E2,locus
R6343 T22135 T22136 det an,fragment
R6344 T22136 T22134 dobj fragment,harbors
R6345 T22137 T22138 punct ~,11
R6346 T22138 T22139 nummod 11,kb
R6347 T22139 T22136 compound kb,fragment
R6348 T22140 T22136 compound BglI,fragment
R6349 T22141 T22136 compound restriction,fragment
R6350 T22142 T22143 dep that,hybridizes
R6351 T22143 T22136 relcl hybridizes,fragment
R6352 T22144 T22143 prep to,hybridizes
R6353 T22145 T22146 det the,probe
R6354 T22146 T22144 pobj probe,to
R6355 T22147 T22146 amod same,probe
R6356 T22148 T22134 punct .,harbors
R6357 T22151 T22152 mark that,detect
R6358 T22152 T22150 ccomp detect,Note
R6359 T22153 T22154 det the,probe
R6360 T22154 T22152 nsubj probe,detect
R6361 T22155 T22152 aux will,detect
R6362 T22156 T22152 neg not,detect
R6363 T22157 T22158 amod random,integration
R6364 T22158 T22152 dobj integration,detect
R6365 T22159 T22158 prep of,integration
R6366 T22160 T22161 det the,vector
R6367 T22161 T22159 pobj vector,of
R6368 T22162 T22161 compound targeting,vector
R6369 T22163 T22164 mark because,is
R6370 T22164 T22152 advcl is,detect
R6371 T22165 T22164 nsubj it,is
R6372 T22166 T22164 acomp external,is
R6373 T22167 T22166 prep to,external
R6374 T22168 T22169 det the,vector
R6375 T22169 T22167 pobj vector,to
R6376 T22170 T22169 compound targeting,vector
R6377 T22171 T22150 punct .,Note
R6378 T22173 T22174 meta B,analysis
R6379 T22175 T22174 punct ", ",analysis
R6380 T22176 T22177 compound Southern,blot
R6381 T22177 T22174 compound blot,analysis
R6382 T22178 T22174 prep of,analysis
R6383 T22179 T22180 npadvmod Bgll,digested
R6384 T22180 T22181 amod digested,DNA
R6385 T22181 T22178 pobj DNA,of
R6386 T22182 T22181 amod genomic,DNA
R6387 T22183 T22181 acl derived,DNA
R6388 T22184 T22183 prep from,derived
R6389 T22185 T22186 det the,line
R6390 T22186 T22184 pobj line,from
R6391 T22187 T22186 amod parental,line
R6392 T22188 T22189 amod wild,type
R6393 T22189 T22186 compound type,line
R6394 T22190 T22191 compound ES,cell
R6395 T22191 T22186 compound cell,line
R6396 T22192 T22193 punct (,R1
R6397 T22193 T22186 parataxis R1,line
R6398 T22194 T22193 punct ),R1
R6399 T22195 T22186 punct ", ",line
R6400 T22196 T22197 det a,line
R6401 T22197 T22186 appos line,line
R6402 T22198 T22197 amod heterozygous,line
R6403 T22199 T22197 amod targeted,line
R6404 T22200 T22201 compound ES,cell
R6405 T22201 T22197 compound cell,line
R6406 T22202 T22203 punct (,362
R6407 T22203 T22197 parataxis 362,line
R6408 T22204 T22203 punct ),362
R6409 T22205 T22184 punct ", ",from
R6410 T22206 T22184 cc and,from
R6411 T22207 T22184 conj from,from
R6412 T22208 T22209 amod wild,type
R6413 T22209 T22210 nmod type,knockout
R6414 T22210 T22225 nmod knockout,mice
R6415 T22211 T22212 punct (,+
R6416 T22212 T22209 punct +,type
R6417 T22213 T22212 punct +,+
R6418 T22214 T22212 punct /,+
R6419 T22215 T22212 punct ),+
R6420 T22216 T22209 punct ", ",type
R6421 T22217 T22209 conj heterozygous,type
R6422 T22218 T22219 punct (,-
R6423 T22219 T22217 punct -,heterozygous
R6424 T22220 T22219 punct +,-
R6425 T22221 T22219 punct /,-
R6426 T22222 T22219 punct ),-
R6427 T22223 T22217 cc and,heterozygous
R6428 T22224 T22217 conj homozygous,heterozygous
R6429 T22225 T22207 pobj mice,from
R6430 T22226 T22227 punct (,-
R6431 T22227 T22210 punct -,knockout
R6432 T22228 T22227 punct -,-
R6433 T22229 T22227 punct /,-
R6434 T22230 T22227 punct ),-
R6435 T22231 T22174 punct .,analysis
R6436 T22233 T22234 det The,blot
R6437 T22234 T22235 nsubjpass blot,hybridized
R6438 T22236 T22235 auxpass was,hybridized
R6439 T22237 T22235 prep with,hybridized
R6440 T22238 T22239 det an,probe
R6441 T22239 T22237 pobj probe,with
R6442 T22240 T22241 npadvmod Exon,specific
R6443 T22241 T22239 amod specific,probe
R6444 T22242 T22240 nummod 6,Exon
R6445 T22243 T22235 punct .,hybridized
R6446 T22245 T22246 meta C,analysis
R6447 T22247 T22246 punct ", ",analysis
R6448 T22248 T22246 amod Immunohistochemical,analysis
R6449 T22249 T22246 prep of,analysis
R6450 T22250 T22251 amod fresh,frozen
R6451 T22251 T22252 amod frozen,sections
R6452 T22252 T22249 pobj sections,of
R6453 T22253 T22252 compound liver,sections
R6454 T22254 T22252 prep from,sections
R6455 T22255 T22256 nmod control,knockout
R6456 T22256 T22264 nmod knockout,pups
R6457 T22257 T22258 punct (,+
R6458 T22258 T22255 punct +,control
R6459 T22259 T22258 punct +,+
R6460 T22260 T22258 punct /,+
R6461 T22261 T22258 punct ),+
R6462 T22262 T22255 cc and,control
R6463 T22263 T22255 conj E2,control
R6464 T22264 T22254 pobj pups,from
R6465 T22265 T22266 punct (,-
R6466 T22266 T22256 punct -,knockout
R6467 T22267 T22266 punct -,-
R6468 T22268 T22266 punct /,-
R6469 T22269 T22266 punct ),-
R6470 T22270 T22271 amod postnatal,day
R6471 T22271 T22264 nmod day,pups
R6472 T22272 T22271 nummod 1,day
R6473 T22273 T22264 compound mouse,pups
R6474 T22274 T22246 punct .,analysis
R6475 T22276 T22277 nsubjpass Sections,stained
R6476 T22278 T22277 auxpass were,stained
R6477 T22279 T22277 prep for,stained
R6478 T22280 T22279 pobj E2,for
R6479 T22281 T22277 advcl using,stained
R6480 T22282 T22283 det an,antibody
R6481 T22283 T22281 dobj antibody,using
R6482 T22284 T22285 npadvmod E2,specific
R6483 T22285 T22283 amod specific,antibody
R6484 T22286 T22287 punct (,green
R6485 T22287 T22283 parataxis green,antibody
R6486 T22288 T22287 punct ),green
R6487 T22289 T22283 cc and,antibody
R6488 T22290 T22291 det a,stain
R6489 T22291 T22283 conj stain,antibody
R6490 T22292 T22291 amod nuclear,stain
R6491 T22293 T22294 punct (,blue
R6492 T22294 T22291 parataxis blue,stain
R6493 T22295 T22294 punct ),blue
R6494 T22296 T22277 punct .,stained
R6495 T22299 T22300 det the,absence
R6496 T22300 T22298 dobj absence,Note
R6497 T22301 T22300 amod complete,absence
R6498 T22302 T22300 prep of,absence
R6499 T22303 T22304 compound E2,immunoreactivity
R6500 T22304 T22302 pobj immunoreactivity,of
R6501 T22305 T22298 prep in,Note
R6502 T22306 T22307 det the,section
R6503 T22307 T22305 pobj section,in
R6504 T22308 T22307 prep from,section
R6505 T22309 T22310 det the,mouse
R6506 T22310 T22308 pobj mouse,from
R6507 T22311 T22310 compound knockout,mouse
R6508 T22312 T22298 punct .,Note
R6509 T22314 T22315 meta D,observed
R6510 T22316 T22315 punct ", ",observed
R6511 T22317 T22318 amod Similar,results
R6512 T22318 T22315 nsubjpass results,observed
R6513 T22319 T22315 auxpass were,observed
R6514 T22320 T22315 prep upon,observed
R6515 T22321 T22322 amod immunohistochemical,analysis
R6516 T22322 T22320 pobj analysis,upon
R6517 T22323 T22322 prep of,analysis
R6518 T22324 T22325 amod primary,fibroblasts
R6519 T22325 T22323 pobj fibroblasts,of
R6520 T22326 T22325 nmod mouse,fibroblasts
R6521 T22327 T22325 amod embryonic,fibroblasts
R6522 T22328 T22325 punct (,fibroblasts
R6523 T22329 T22325 appos MEFs,fibroblasts
R6524 T22330 T22315 punct ),observed
R6525 T22331 T22315 punct .,observed
R6526 T22334 T22335 mark that,was
R6527 T22335 T22333 ccomp was,Note
R6528 T22336 T22337 det the,signal
R6529 T22337 T22335 nsubj signal,was
R6530 T22338 T22339 advmod readily,detectable
R6531 T22339 T22337 amod detectable,signal
R6532 T22340 T22337 prep for,signal
R6533 T22341 T22340 pobj E2,for
R6534 T22342 T22337 prep in,signal
R6535 T22343 T22344 det the,cells
R6536 T22344 T22342 pobj cells,in
R6537 T22345 T22344 compound control,cells
R6538 T22346 T22335 acomp present,was
R6539 T22347 T22346 prep in,present
R6540 T22348 T22349 det a,pattern
R6541 T22349 T22347 pobj pattern,in
R6542 T22350 T22349 amod characteristic,pattern
R6543 T22351 T22350 prep of,characteristic
R6544 T22352 T22351 pobj mitochondria,of
R6545 T22353 T22352 punct ", ",mitochondria
R6546 T22354 T22355 det the,location
R6547 T22355 T22352 appos location,mitochondria
R6548 T22356 T22355 amod subcellular,location
R6549 T22357 T22355 prep of,location
R6550 T22358 T22357 pobj BCKDH,of
R6551 T22359 T22333 punct .,Note

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21984 0-2 PR_EXT:000006300 denotes E2
T21985 3-7 SO_EXT:0000704 denotes gene
T21986 17-22 NCBITaxon:10088 denotes mouse
T21987 38-42 SO_EXT:0000704 denotes Gene
T21988 85-87 PR_EXT:000006300 denotes E2
T21989 97-102 NCBITaxon:10088 denotes mouse
T21990 103-111 CL:0002322 denotes ES cells
T21991 106-111 CL_GO_EXT:cell denotes cells
T21992 127-136 SO_EXT:engineered_biological_sequence denotes construct
T21993 153-159 SO_EXT:sequence_deletion_process denotes delete
T21994 166-167 CHEBI_SO_EXT:base denotes b
T21995 171-179 SO_EXT:biological_sequence denotes sequence
T21996 197-209 SO_EXT:0000852 denotes site in Exon
T21997 231-237 SO_EXT:0000188 denotes intron
T21998 245-254 SO_EXT:wild_type_entity_or_quality denotes wild type
T21999 255-257 PR_EXT:000006300 denotes E2
T22000 258-262 SO_EXT:0000704 denotes gene
T22001 280-281 CHEBI_SO_EXT:base denotes b
T22002 287-307 SO_EXT:0000412 denotes restriction fragment
T22003 313-323 GO:0097617 denotes hybridizes
T22004 331-335 SO_EXT:0000147 denotes Exon
T22005 347-352 CHEBI_SO_EXT:molecular_probe denotes probe
T22006 375-377 PR_EXT:000006300 denotes E2
T22007 400-401 CHEBI_SO_EXT:base denotes b
T22008 407-427 SO_EXT:0000412 denotes restriction fragment
T22009 433-443 GO:0097617 denotes hybridizes
T22010 456-461 CHEBI_SO_EXT:molecular_probe denotes probe
T22011 477-482 CHEBI_SO_EXT:molecular_probe denotes probe
T22012 525-541 SO_EXT:0001644 denotes targeting vector
T22013 572-588 SO_EXT:0001644 denotes targeting vector
T22014 633-644 SO_EXT:genomic_DNA denotes genomic DNA
T22015 641-644 CHEBI_SO_EXT:DNA denotes DNA
T22016 671-680 SO_EXT:wild_type_entity_or_quality denotes wild type
T22017 681-688 CL:0002322 denotes ES cell
T22018 684-688 CL_GO_EXT:cell denotes cell
T22019 724-731 CL:0002322 denotes ES cell
T22020 727-731 CL_GO_EXT:cell denotes cell
T22021 753-762 SO_EXT:wild_type_entity_or_quality denotes wild type
T22022 764-765 SO_EXT:normal_or_wild_type_or_present denotes +
T22023 766-767 SO_EXT:normal_or_wild_type_or_present denotes +
T22024 784-785 SO_EXT:normal_or_wild_type_or_present denotes +
T22025 786-787 SO_EXT:sequence_nullness_or_absence denotes -
T22026 814-815 SO_EXT:sequence_nullness_or_absence denotes -
T22027 816-817 SO_EXT:sequence_nullness_or_absence denotes -
T22028 819-823 NCBITaxon:10088 denotes mice
T22029 838-848 GO:0097617 denotes hybridized
T22030 857-861 SO_EXT:0000147 denotes Exon
T22031 873-878 CHEBI_SO_EXT:molecular_probe denotes probe
T22032 928-933 UBERON:0002107 denotes liver
T22033 957-958 SO_EXT:normal_or_wild_type_or_present denotes +
T22034 959-960 SO_EXT:normal_or_wild_type_or_present denotes +
T22035 966-968 PR_EXT:000006300 denotes E2
T22036 979-980 SO_EXT:sequence_nullness_or_absence denotes -
T22037 981-982 SO_EXT:sequence_nullness_or_absence denotes -
T22038 988-993 GO:0007567 denotes natal
T22039 1000-1005 NCBITaxon:10088 denotes mouse
T22040 1006-1010 NCBITaxon_UBERON_EXT:pup denotes pups
T22041 1038-1040 PR_EXT:000006300 denotes E2
T22042 1050-1052 PR_EXT:000006300 denotes E2
T22043 1062-1070 GO:0042571 denotes antibody
T22044 1085-1092 GO:0005634 denotes nuclear
T22045 1136-1138 PR_EXT:000006300 denotes E2
T22046 1189-1194 NCBITaxon:10088 denotes mouse
T22047 1274-1279 NCBITaxon:10088 denotes mouse
T22048 1280-1289 UBERON:0000922 denotes embryonic
T22049 1290-1301 CL:0000057 denotes fibroblasts
T22050 1354-1356 PR_EXT:000006300 denotes E2
T22051 1372-1377 CL_GO_EXT:cell denotes cells
T22052 1421-1433 GO:0005739 denotes mitochondria
T22053 1439-1450 GO_UBERON_EXT:cellular_component_or_cell_part denotes subcellular
T22054 1442-1450 CL_GO_EXT:cell denotes cellular

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21944 0-2 PR:000006300 denotes E2
T21945 3-7 SO:0000704 denotes gene
T21946 17-22 NCBITaxon:10088 denotes mouse
T21947 38-42 SO:0000704 denotes Gene
T21948 85-87 PR:000006300 denotes E2
T21949 97-102 NCBITaxon:10088 denotes mouse
T21950 103-111 CL:0002322 denotes ES cells
T21951 197-209 SO:0000852 denotes site in Exon
T21952 231-237 SO:0000188 denotes intron
T21953 255-257 PR:000006300 denotes E2
T21954 258-262 SO:0000704 denotes gene
T21955 287-307 SO:0000412 denotes restriction fragment
T21956 313-323 GO:0097617 denotes hybridizes
T21957 331-335 SO:0000147 denotes Exon
T21958 375-377 PR:000006300 denotes E2
T21959 407-427 SO:0000412 denotes restriction fragment
T21960 433-443 GO:0097617 denotes hybridizes
T21961 525-541 SO:0001644 denotes targeting vector
T21962 572-588 SO:0001644 denotes targeting vector
T21963 633-640 SO:0001026 denotes genomic
T21964 681-688 CL:0002322 denotes ES cell
T21965 724-731 CL:0002322 denotes ES cell
T21966 819-823 NCBITaxon:10088 denotes mice
T21967 838-848 GO:0097617 denotes hybridized
T21968 857-861 SO:0000147 denotes Exon
T21969 928-933 UBERON:0002107 denotes liver
T21970 966-968 PR:000006300 denotes E2
T21971 988-993 GO:0007567 denotes natal
T21972 1000-1005 NCBITaxon:10088 denotes mouse
T21973 1038-1040 PR:000006300 denotes E2
T21974 1050-1052 PR:000006300 denotes E2
T21975 1062-1070 GO:0042571 denotes antibody
T21976 1085-1092 GO:0005634 denotes nuclear
T21977 1136-1138 PR:000006300 denotes E2
T21978 1189-1194 NCBITaxon:10088 denotes mouse
T21979 1274-1279 NCBITaxon:10088 denotes mouse
T21980 1280-1289 UBERON:0000922 denotes embryonic
T21981 1290-1301 CL:0000057 denotes fibroblasts
T21982 1354-1356 PR:000006300 denotes E2
T21983 1421-1433 GO:0005739 denotes mitochondria