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PMC:1448208 / 6119-6532 JSONTXT

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Id Subject Object Predicate Lexical cue
T4113 0-8 RB denotes Recently
T4114 111-120 VBN denotes described
T4115 8-10 , denotes ,
T4116 10-11 DT denotes a
T4117 22-33 NN denotes nitrosourea
T4118 12-13 NN denotes N
T4119 14-19 NN denotes ethyl
T4120 13-14 HYPH denotes -
T4121 19-20 HYPH denotes -
T4122 20-21 NN denotes N
T4123 21-22 HYPH denotes -
T4124 40-47 VBN denotes induced
T4125 34-35 -LRB- denotes (
T4126 35-38 NN denotes ENU
T4127 38-39 -RRB- denotes )
T4128 39-40 HYPH denotes -
T4129 55-60 NN denotes mouse
T4130 48-54 NN denotes mutant
T4131 61-65 WDT denotes that
T4132 81-90 VBZ denotes resembles
T4133 66-80 RB denotes phenotypically
T4134 91-96 JJ denotes human
T4135 97-101 NN denotes MSUD
T4136 102-105 VBZ denotes has
T4137 106-110 VBN denotes been
T4138 121-122 -LRB- denotes [
T4139 122-124 CD denotes 20
T4140 124-125 -RRB- denotes ]
T4141 125-126 . denotes .
T4142 126-295 sentence denotes However, the mutation in this model disrupts a splice site in the mitochondrial branched-chain aminotransferase (BCAT) gene, not in BCKDH, the deficient enzyme in MSUD.
T4143 127-134 RB denotes However
T4144 163-171 VBZ denotes disrupts
T4145 134-136 , denotes ,
T4146 136-139 DT denotes the
T4147 140-148 NN denotes mutation
T4148 149-151 IN denotes in
T4149 152-156 DT denotes this
T4150 157-162 NN denotes model
T4151 172-173 DT denotes a
T4152 181-185 NN denotes site
T4153 174-180 NN denotes splice
T4154 186-188 IN denotes in
T4155 189-192 DT denotes the
T4156 222-238 NN denotes aminotransferase
T4157 193-206 JJ denotes mitochondrial
T4158 207-215 VBN denotes branched
T4159 216-221 NN denotes chain
T4160 215-216 HYPH denotes -
T4161 246-250 NN denotes gene
T4162 239-240 -LRB- denotes (
T4163 240-244 NN denotes BCAT
T4164 244-245 -RRB- denotes )
T4165 250-252 , denotes ,
T4166 252-255 RB denotes not
T4167 256-258 IN denotes in
T4168 259-264 NN denotes BCKDH
T4169 264-266 , denotes ,
T4170 266-269 DT denotes the
T4171 280-286 NN denotes enzyme
T4172 270-279 JJ denotes deficient
T4173 287-289 IN denotes in
T4174 290-294 NN denotes MSUD
T4175 294-295 . denotes .
T4176 295-413 sentence denotes Because the mutation is not in BCKDH, the validity of this mutant mouse line for modeling human MSUD is questionable.
T4177 296-303 IN denotes Because
T4178 317-319 VBZ denotes is
T4179 304-307 DT denotes the
T4180 308-316 NN denotes mutation
T4181 397-399 VBZ denotes is
T4182 320-323 RB denotes not
T4183 324-326 IN denotes in
T4184 327-332 NN denotes BCKDH
T4185 332-334 , denotes ,
T4186 334-337 DT denotes the
T4187 338-346 NN denotes validity
T4188 347-349 IN denotes of
T4189 350-354 DT denotes this
T4190 368-372 NN denotes line
T4191 355-361 NN denotes mutant
T4192 362-367 NN denotes mouse
T4193 373-376 IN denotes for
T4194 377-385 VBG denotes modeling
T4195 392-396 NN denotes MSUD
T4196 386-391 JJ denotes human
T4197 400-412 JJ denotes questionable
T4198 412-413 . denotes .
R1065 T4162 T4156 punct (,aminotransferase
R1067 T4163 T4156 appos BCAT,aminotransferase
R1068 T4164 T4161 punct ),gene
R1069 T4165 T4154 punct ", ",in
R1070 T4166 T4154 neg not,in
R1071 T4167 T4154 prep in,in
R1073 T4168 T4167 pobj BCKDH,in
R1074 T4169 T4168 punct ", ",BCKDH
R1076 T4170 T4171 det the,enzyme
R1077 T4171 T4168 appos enzyme,BCKDH
R1078 T4172 T4171 amod deficient,enzyme
R1079 T4173 T4171 prep in,enzyme
R1081 T4174 T4173 pobj MSUD,in
R1082 T4175 T4144 punct .,disrupts
R1084 T4177 T4178 mark Because,is
R1085 T4178 T4181 advcl is,is
R1087 T4179 T4180 det the,mutation
R1088 T4180 T4178 nsubj mutation,is
R1089 T4182 T4178 neg not,is
R1091 T4183 T4178 prep in,is
R1092 T4184 T4183 pobj BCKDH,in
R1093 T4185 T4181 punct ", ",is
R1094 T4186 T4187 det the,validity
R1095 T4187 T4181 nsubj validity,is
R1097 T4188 T4187 prep of,validity
R1098 T4189 T4190 det this,line
R1099 T4190 T4188 pobj line,of
R1100 T4191 T4190 compound mutant,line
R1102 T4192 T4190 compound mouse,line
R1103 T4193 T4187 prep for,validity
R1104 T4194 T4195 amod modeling,MSUD
R1106 T4195 T4193 pobj MSUD,for
R1107 T4196 T4195 amod human,MSUD
R1108 T4197 T4181 acomp questionable,is
R1110 T4198 T4181 punct .,is
R1212 T4113 T4114 advmod Recently,described
R1217 T4115 T4114 punct ", ",described
R1222 T4116 T4117 det a,nitrosourea
R1227 T4117 T4124 npadvmod nitrosourea,induced
R1231 T4118 T4119 compound N,ethyl
R1235 T4119 T4117 compound ethyl,nitrosourea
R1239 T4120 T4119 punct -,ethyl
R1243 T4121 T4117 punct -,nitrosourea
R1247 T4122 T4117 compound N,nitrosourea
R1252 T4123 T4117 punct -,nitrosourea
R1256 T4124 T4129 amod induced,mouse
R1258 T4125 T4117 punct (,nitrosourea
R1259 T4126 T4117 appos ENU,nitrosourea
R1260 T4127 T4124 punct ),induced
R1261 T4128 T4124 punct -,induced
R1262 T4129 T4114 nsubjpass mouse,described
R1263 T4130 T4129 compound mutant,mouse
R1264 T4131 T4132 dep that,resembles
R1265 T4132 T4129 relcl resembles,mouse
R1266 T4133 T4132 advmod phenotypically,resembles
R1267 T4134 T4135 amod human,MSUD
R1268 T4135 T4132 dobj MSUD,resembles
R1269 T4136 T4114 aux has,described
R1270 T4137 T4114 auxpass been,described
R1271 T4138 T4139 punct [,20
R1272 T4139 T4114 parataxis 20,described
R1273 T4140 T4139 punct ],20
R1274 T4141 T4114 punct .,described
R1275 T4143 T4144 advmod However,disrupts
R1276 T4145 T4144 punct ", ",disrupts
R1277 T4146 T4147 det the,mutation
R1278 T4147 T4144 nsubj mutation,disrupts
R1279 T4148 T4147 prep in,mutation
R1280 T4149 T4150 det this,model
R1281 T4150 T4148 pobj model,in
R1282 T4151 T4152 det a,site
R1283 T4152 T4144 dobj site,disrupts
R1284 T4153 T4152 compound splice,site
R1285 T4154 T4152 prep in,site
R1286 T4155 T4156 det the,aminotransferase
R1287 T4156 T4161 nmod aminotransferase,gene
R1288 T4157 T4156 amod mitochondrial,aminotransferase
R1289 T4158 T4159 amod branched,chain
R1290 T4159 T4156 nmod chain,aminotransferase
R1291 T4160 T4159 punct -,chain
R1292 T4161 T4154 pobj gene,in

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3268 12-33 CHEBI:23995 denotes N-ethyl-N-nitrosourea
T3269 35-38 CHEBI:23995 denotes ENU
T3270 48-54 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T3271 55-60 NCBITaxon:10088 denotes mouse
T3272 91-96 NCBITaxon:9606 denotes human
T3273 140-148 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T3274 174-180 GO:0008380 denotes splice
T3275 174-185 SO_EXT:0000162 denotes splice site
T3276 193-206 GO:0005739 denotes mitochondrial
T3277 193-238 PR_EXT:000004683 denotes mitochondrial branched-chain aminotransferase
T3278 207-238 GO_PR_EXT:branched_chain_amino_acid_aminotransferase denotes branched-chain aminotransferase
T3279 240-244 GO_PR_EXT:branched_chain_amino_acid_aminotransferase denotes BCAT
T3280 246-250 SO_EXT:0000704 denotes gene
T3281 280-286 CHEBI_GO_SO_EXT:enzyme denotes enzyme
T3282 308-316 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T3283 355-361 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T3284 362-367 NCBITaxon:10088 denotes mouse
T3285 386-391 NCBITaxon:9606 denotes human

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3157 12-33 CHEBI:23995 denotes N-ethyl-N-nitrosourea
T3158 35-38 CHEBI:23995 denotes ENU
T3159 55-60 NCBITaxon:10088 denotes mouse
T3160 91-96 NCBITaxon:9606 denotes human
T3161 174-180 GO:0008380 denotes splice
T3162 174-185 SO:0000162 denotes splice site
T3163 193-206 GO:0005739 denotes mitochondrial
T3164 193-238 PR:000004683 denotes mitochondrial branched-chain aminotransferase
T3165 246-250 SO:0000704 denotes gene
T3166 362-367 NCBITaxon:10088 denotes mouse
T3167 386-391 NCBITaxon:9606 denotes human