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PMC:1448208 / 19451-20288 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T22807 10-21 JJ denotes Biochemical
T22808 22-38 NN denotes characterization
T22809 39-41 IN denotes of
T22810 42-45 DT denotes the
T22811 66-71 NN denotes model
T22812 46-53 JJ denotes classic
T22813 54-58 NN denotes MSUD
T22814 59-65 JJ denotes murine
T22815 71-72 . denotes .
T22816 72-198 sentence denotes A, BCKDH enzyme activity in liver of newborn wild type control (+/+), heterozygous (+/-), and homozygous (-/-) knockout mice.
T22817 73-74 LS denotes A
T22818 89-97 NN denotes activity
T22819 74-76 , denotes ,
T22820 76-81 NN denotes BCKDH
T22821 82-88 NN denotes enzyme
T22822 98-100 IN denotes in
T22823 101-106 NN denotes liver
T22824 107-109 IN denotes of
T22825 110-117 JJ denotes newborn
T22826 193-197 NNS denotes mice
T22827 118-122 JJ denotes wild
T22828 123-127 NN denotes type
T22829 128-135 NN denotes control
T22830 184-192 NN denotes knockout
T22831 136-137 -LRB- denotes (
T22832 139-140 SYM denotes +
T22833 137-138 SYM denotes +
T22834 138-139 HYPH denotes /
T22835 140-141 -RRB- denotes )
T22836 141-143 , denotes ,
T22837 143-155 JJ denotes heterozygous
T22838 156-157 -LRB- denotes (
T22839 159-160 SYM denotes -
T22840 157-158 SYM denotes +
T22841 158-159 HYPH denotes /
T22842 160-161 -RRB- denotes )
T22843 161-163 , denotes ,
T22844 163-166 CC denotes and
T22845 167-177 JJ denotes homozygous
T22846 178-179 -LRB- denotes (
T22847 181-182 SYM denotes -
T22848 179-180 SYM denotes -
T22849 180-181 HYPH denotes /
T22850 182-183 -RRB- denotes )
T22851 197-198 . denotes .
T22852 198-321 sentence denotes Enzyme activity was significantly reduced in +/- liver compared to +/+, and was below the level of detection in -/- liver.
T22853 199-205 NN denotes Enzyme
T22854 206-214 NN denotes activity
T22855 215-218 VBD denotes was
T22856 219-232 RB denotes significantly
T22857 233-240 JJ denotes reduced
T22858 241-243 IN denotes in
T22859 244-245 SYM denotes +
T22860 246-247 SYM denotes -
T22861 245-246 HYPH denotes /
T22862 248-253 NN denotes liver
T22863 254-262 VBN denotes compared
T22864 263-265 IN denotes to
T22865 266-267 SYM denotes +
T22866 268-269 SYM denotes +
T22867 267-268 HYPH denotes /
T22868 269-271 , denotes ,
T22869 271-274 CC denotes and
T22870 275-278 VBD denotes was
T22871 279-284 IN denotes below
T22872 285-288 DT denotes the
T22873 289-294 NN denotes level
T22874 295-297 IN denotes of
T22875 298-307 NN denotes detection
T22876 308-310 IN denotes in
T22877 311-312 SYM denotes -
T22878 313-314 SYM denotes -
T22879 312-313 HYPH denotes /
T22880 315-320 NN denotes liver
T22881 320-321 . denotes .
T22882 321-368 sentence denotes B, Total BCAA concentrations in blood of mice.
T22883 322-323 LS denotes B
T22884 336-350 NNS denotes concentrations
T22885 323-325 , denotes ,
T22886 325-330 JJ denotes Total
T22887 331-335 NN denotes BCAA
T22888 351-353 IN denotes in
T22889 354-359 NN denotes blood
T22890 360-362 IN denotes of
T22891 363-367 NNS denotes mice
T22892 367-368 . denotes .
T22893 368-433 sentence denotes Total BCAA represent the sum of leucine, isoleucine, and valine.
T22894 369-374 JJ denotes Total
T22895 375-379 NN denotes BCAA
T22896 380-389 VBP denotes represent
T22897 390-393 DT denotes the
T22898 394-397 NN denotes sum
T22899 398-400 IN denotes of
T22900 401-408 NN denotes leucine
T22901 408-410 , denotes ,
T22902 410-420 NN denotes isoleucine
T22903 420-422 , denotes ,
T22904 422-425 CC denotes and
T22905 426-432 NN denotes valine
T22906 432-433 . denotes .
T22907 433-535 sentence denotes Total BCAA concentrations in blood from -/- mice were significantly elevated compared to +/+ and +/-.
T22908 434-439 JJ denotes Total
T22909 445-459 NNS denotes concentrations
T22910 440-444 NN denotes BCAA
T22911 483-487 VBD denotes were
T22912 460-462 IN denotes in
T22913 463-468 NN denotes blood
T22914 469-473 IN denotes from
T22915 474-475 SYM denotes -
T22916 476-477 SYM denotes -
T22917 475-476 HYPH denotes /
T22918 478-482 NNS denotes mice
T22919 488-501 RB denotes significantly
T22920 502-510 JJ denotes elevated
T22921 511-519 VBN denotes compared
T22922 520-522 IN denotes to
T22923 523-524 SYM denotes +
T22924 525-526 SYM denotes +
T22925 524-525 HYPH denotes /
T22926 527-530 CC denotes and
T22927 531-532 SYM denotes +
T22928 533-534 SYM denotes -
T22929 532-533 HYPH denotes /
T22930 534-535 . denotes .
T22931 535-587 sentence denotes C, Ratio of total BCAA to alanine in blood of mice.
T22932 536-537 LS denotes C
T22933 539-544 NN denotes Ratio
T22934 537-539 , denotes ,
T22935 545-547 IN denotes of
T22936 548-553 JJ denotes total
T22937 554-558 NN denotes BCAA
T22938 559-561 IN denotes to
T22939 562-569 NN denotes alanine
T22940 570-572 IN denotes in
T22941 573-578 NN denotes blood
T22942 579-581 IN denotes of
T22943 582-586 NNS denotes mice
T22944 586-587 . denotes .
T22945 587-667 sentence denotes This ratio was significantly elevated in -/- mice compared to +/+ and +/- mice.
T22946 588-592 DT denotes This
T22947 593-598 NN denotes ratio
T22948 599-602 VBD denotes was
T22949 603-616 RB denotes significantly
T22950 617-625 JJ denotes elevated
T22951 626-628 IN denotes in
T22952 629-630 SYM denotes -
T22953 631-632 SYM denotes -
T22954 630-631 HYPH denotes /
T22955 633-637 NNS denotes mice
T22956 638-646 VBN denotes compared
T22957 647-649 IN denotes to
T22958 650-651 SYM denotes +
T22959 652-653 SYM denotes +
T22960 651-652 HYPH denotes /
T22961 662-666 NNS denotes mice
T22962 654-657 CC denotes and
T22963 658-659 SYM denotes +
T22964 660-661 SYM denotes -
T22965 659-660 HYPH denotes /
T22966 666-667 . denotes .
T22967 667-730 sentence denotes The numbers on the bars indicates the number of mice analyzed.
T22968 668-671 DT denotes The
T22969 672-679 NNS denotes numbers
T22970 692-701 VBZ denotes indicates
T22971 680-682 IN denotes on
T22972 683-686 DT denotes the
T22973 687-691 NNS denotes bars
T22974 702-705 DT denotes the
T22975 706-712 NN denotes number
T22976 713-715 IN denotes of
T22977 716-720 NNS denotes mice
T22978 721-729 VBN denotes analyzed
T22979 729-730 . denotes .
T22980 730-837 sentence denotes *, Significantly different from +/+ (P < 0.001); **, significantly different from +/+ and +/- (P < 0.001).
T22981 731-732 SYM denotes *
T22982 780-782 SYM denotes **
T22983 732-734 , denotes ,
T22984 734-747 RB denotes Significantly
T22985 748-757 JJ denotes different
T22986 758-762 IN denotes from
T22987 763-764 SYM denotes +
T22988 765-766 SYM denotes +
T22989 764-765 HYPH denotes /
T22990 767-768 -LRB- denotes (
T22991 772-777 CD denotes 0.001
T22992 768-769 NN denotes P
T22993 770-771 SYM denotes <
T22994 777-778 -RRB- denotes )
T22995 778-779 : denotes ;
T22996 782-784 , denotes ,
T22997 784-797 RB denotes significantly
T22998 798-807 JJ denotes different
T22999 808-812 IN denotes from
T23000 813-814 SYM denotes +
T23001 815-816 SYM denotes +
T23002 814-815 HYPH denotes /
T23003 817-820 CC denotes and
T23004 821-822 SYM denotes +
T23005 823-824 SYM denotes -
T23006 822-823 HYPH denotes /
T23007 825-826 -LRB- denotes (
T23008 830-835 CD denotes 0.001
T23009 826-827 NN denotes P
T23010 828-829 SYM denotes <
T23011 835-836 -RRB- denotes )
T23012 836-837 . denotes .
R6552 T22807 T22808 amod Biochemical,characterization
R6553 T22809 T22808 prep of,characterization
R6554 T22810 T22811 det the,model
R6555 T22811 T22809 pobj model,of
R6556 T22812 T22811 amod classic,model
R6557 T22813 T22811 nmod MSUD,model
R6558 T22814 T22811 amod murine,model
R6559 T22815 T22808 punct .,characterization
R6560 T22817 T22818 meta A,activity
R6561 T22819 T22818 punct ", ",activity
R6562 T22820 T22818 compound BCKDH,activity
R6563 T22821 T22818 compound enzyme,activity
R6564 T22822 T22818 prep in,activity
R6565 T22823 T22822 pobj liver,in
R6566 T22824 T22823 prep of,liver
R6567 T22825 T22826 amod newborn,mice
R6568 T22826 T22824 pobj mice,of
R6569 T22827 T22828 amod wild,type
R6570 T22828 T22829 nmod type,control
R6571 T22829 T22830 nmod control,knockout
R6572 T22830 T22826 compound knockout,mice
R6573 T22831 T22832 punct (,+
R6574 T22832 T22829 punct +,control
R6575 T22833 T22832 punct +,+
R6576 T22834 T22832 punct /,+
R6577 T22835 T22832 punct ),+
R6578 T22836 T22829 punct ", ",control
R6579 T22837 T22829 conj heterozygous,control
R6580 T22838 T22839 punct (,-
R6581 T22839 T22837 punct -,heterozygous
R6582 T22840 T22839 punct +,-
R6583 T22841 T22839 punct /,-
R6584 T22842 T22839 punct ),-
R6585 T22843 T22837 punct ", ",heterozygous
R6586 T22844 T22837 cc and,heterozygous
R6587 T22845 T22837 conj homozygous,heterozygous
R6588 T22846 T22847 punct (,-
R6589 T22847 T22845 punct -,homozygous
R6590 T22848 T22847 punct -,-
R6591 T22849 T22847 punct /,-
R6592 T22850 T22847 punct ),-
R6593 T22851 T22818 punct .,activity
R6594 T22853 T22854 compound Enzyme,activity
R6595 T22854 T22855 nsubj activity,was
R6596 T22856 T22857 advmod significantly,reduced
R6597 T22857 T22855 acomp reduced,was
R6598 T22858 T22855 prep in,was
R6599 T22859 T22860 punct +,-
R6600 T22860 T22862 punct -,liver
R6601 T22861 T22860 punct /,-
R6602 T22862 T22858 pobj liver,in
R6603 T22863 T22855 prep compared,was
R6604 T22864 T22863 prep to,compared
R6605 T22865 T22866 punct +,+
R6606 T22866 T22864 punct +,to
R6607 T22867 T22866 punct /,+
R6608 T22868 T22855 punct ", ",was
R6609 T22869 T22855 cc and,was
R6610 T22870 T22855 conj was,was
R6611 T22871 T22870 prep below,was
R6612 T22872 T22873 det the,level
R6613 T22873 T22871 pobj level,below
R6614 T22874 T22873 prep of,level
R6615 T22875 T22874 pobj detection,of
R6616 T22876 T22870 prep in,was
R6617 T22877 T22878 punct -,-
R6618 T22878 T22880 punct -,liver
R6619 T22879 T22878 punct /,-
R6620 T22880 T22876 pobj liver,in
R6621 T22881 T22855 punct .,was
R6622 T22883 T22884 meta B,concentrations
R6623 T22885 T22884 punct ", ",concentrations
R6624 T22886 T22884 amod Total,concentrations
R6625 T22887 T22884 compound BCAA,concentrations
R6626 T22888 T22884 prep in,concentrations
R6627 T22889 T22888 pobj blood,in
R6628 T22890 T22889 prep of,blood
R6629 T22891 T22890 pobj mice,of
R6630 T22892 T22884 punct .,concentrations
R6631 T22894 T22895 amod Total,BCAA
R6632 T22895 T22896 nsubj BCAA,represent
R6633 T22897 T22898 det the,sum
R6634 T22898 T22896 dobj sum,represent
R6635 T22899 T22898 prep of,sum
R6636 T22900 T22899 pobj leucine,of
R6637 T22901 T22900 punct ", ",leucine
R6638 T22902 T22900 conj isoleucine,leucine
R6639 T22903 T22902 punct ", ",isoleucine
R6640 T22904 T22902 cc and,isoleucine
R6641 T22905 T22902 conj valine,isoleucine
R6642 T22906 T22896 punct .,represent
R6643 T22908 T22909 amod Total,concentrations
R6644 T22909 T22911 nsubj concentrations,were
R6645 T22910 T22909 compound BCAA,concentrations
R6646 T22912 T22909 prep in,concentrations
R6647 T22913 T22912 pobj blood,in
R6648 T22914 T22913 prep from,blood
R6649 T22915 T22916 punct -,-
R6650 T22916 T22918 punct -,mice
R6651 T22917 T22916 punct /,-
R6652 T22918 T22914 pobj mice,from
R6653 T22919 T22920 advmod significantly,elevated
R6654 T22920 T22911 acomp elevated,were
R6655 T22921 T22911 prep compared,were
R6656 T22922 T22921 prep to,compared
R6657 T22923 T22924 punct +,+
R6658 T22924 T22922 punct +,to
R6659 T22925 T22924 punct /,+
R6660 T22926 T22924 cc and,+
R6661 T22927 T22928 punct +,-
R6662 T22928 T22924 conj -,+
R6663 T22929 T22928 punct /,-
R6664 T22930 T22911 punct .,were
R6665 T22932 T22933 meta C,Ratio
R6666 T22934 T22933 punct ", ",Ratio
R6667 T22935 T22933 prep of,Ratio
R6668 T22936 T22937 amod total,BCAA
R6669 T22937 T22935 pobj BCAA,of
R6670 T22938 T22933 prep to,Ratio
R6671 T22939 T22938 pobj alanine,to
R6672 T22940 T22933 prep in,Ratio
R6673 T22941 T22940 pobj blood,in
R6674 T22942 T22941 prep of,blood
R6675 T22943 T22942 pobj mice,of
R6676 T22944 T22933 punct .,Ratio
R6677 T22946 T22947 det This,ratio
R6678 T22947 T22948 nsubj ratio,was
R6679 T22949 T22950 advmod significantly,elevated
R6680 T22950 T22948 acomp elevated,was
R6681 T22951 T22948 prep in,was
R6682 T22952 T22953 punct -,-
R6683 T22953 T22955 punct -,mice
R6684 T22954 T22953 punct /,-
R6685 T22955 T22951 pobj mice,in
R6686 T22956 T22948 prep compared,was
R6687 T22957 T22956 prep to,compared
R6688 T22958 T22959 punct +,+
R6689 T22959 T22961 punct +,mice
R6690 T22960 T22959 punct /,+
R6691 T22961 T22957 pobj mice,to
R6692 T22962 T22959 cc and,+
R6693 T22963 T22964 punct +,-
R6694 T22964 T22959 conj -,+
R6695 T22965 T22964 punct /,-
R6696 T22966 T22948 punct .,was
R6697 T22968 T22969 det The,numbers
R6698 T22969 T22970 nsubj numbers,indicates
R6699 T22971 T22969 prep on,numbers
R6700 T22972 T22973 det the,bars
R6701 T22973 T22971 pobj bars,on
R6702 T22974 T22975 det the,number
R6703 T22975 T22970 dobj number,indicates
R6704 T22976 T22975 prep of,number
R6705 T22977 T22976 pobj mice,of
R6706 T22978 T22977 acl analyzed,mice
R6707 T22979 T22970 punct .,indicates
R6708 T22981 T22982 punct *,**
R6709 T22983 T22981 punct ", ",*
R6710 T22984 T22985 advmod Significantly,different
R6711 T22985 T22981 amod different,*
R6712 T22986 T22985 prep from,different
R6713 T22987 T22988 punct +,+
R6714 T22988 T22986 punct +,from
R6715 T22989 T22988 punct /,+
R6716 T22990 T22991 punct (,0.001
R6717 T22991 T22985 parataxis 0.001,different
R6718 T22992 T22991 nsubj P,0.001
R6719 T22993 T22991 punct <,0.001
R6720 T22994 T22991 punct ),0.001
R6721 T22995 T22982 punct ;,**
R6722 T22996 T22982 punct ", ",**
R6723 T22997 T22998 advmod significantly,different
R6724 T22998 T22982 amod different,**
R6725 T22999 T22998 prep from,different
R6726 T23000 T23001 punct +,+
R6727 T23001 T22999 punct +,from
R6728 T23002 T23001 punct /,+
R6729 T23003 T23001 cc and,+
R6730 T23004 T23005 punct +,-
R6731 T23005 T23001 conj -,+
R6732 T23006 T23005 punct /,-
R6733 T23007 T23008 punct (,0.001
R6734 T23008 T22998 parataxis 0.001,different
R6735 T23009 T23008 nsubj P,0.001
R6736 T23010 T23008 punct <,0.001
R6737 T23011 T23008 punct ),0.001
R6738 T23012 T22982 punct .,**

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T22750 10-21 CHEBI_EXT:biochemical denotes Biochemical
T22751 59-65 NCBITaxon:39107 denotes murine
T22752 82-88 CHEBI_GO_SO_EXT:enzyme denotes enzyme
T22753 101-106 UBERON:0002107 denotes liver
T22754 110-117 PATO_UBERON_EXT:neonate_or_newborn denotes newborn
T22755 118-127 SO_EXT:wild_type_entity_or_quality denotes wild type
T22756 137-138 SO_EXT:normal_or_wild_type_or_present denotes +
T22757 139-140 SO_EXT:normal_or_wild_type_or_present denotes +
T22758 157-158 SO_EXT:normal_or_wild_type_or_present denotes +
T22759 159-160 SO_EXT:sequence_nullness_or_absence denotes -
T22760 179-180 SO_EXT:sequence_nullness_or_absence denotes -
T22761 181-182 SO_EXT:sequence_nullness_or_absence denotes -
T22762 193-197 NCBITaxon:10088 denotes mice
T22763 199-205 CHEBI_GO_SO_EXT:enzyme denotes Enzyme
T22764 244-245 SO_EXT:normal_or_wild_type_or_present denotes +
T22765 246-247 SO_EXT:sequence_nullness_or_absence denotes -
T22766 248-253 UBERON:0002107 denotes liver
T22767 266-267 SO_EXT:normal_or_wild_type_or_present denotes +
T22768 268-269 SO_EXT:normal_or_wild_type_or_present denotes +
T22769 311-312 SO_EXT:sequence_nullness_or_absence denotes -
T22770 313-314 SO_EXT:sequence_nullness_or_absence denotes -
T22771 315-320 UBERON:0002107 denotes liver
T22772 331-335 CHEBI:22918 denotes BCAA
T22773 354-359 UBERON:0000178 denotes blood
T22774 363-367 NCBITaxon:10088 denotes mice
T22775 375-379 CHEBI:22918 denotes BCAA
T22776 401-408 CHEBI_SO_EXT:leucine denotes leucine
T22777 410-420 CHEBI_SO_EXT:isoleucine denotes isoleucine
T22778 426-432 CHEBI_SO_EXT:valine denotes valine
T22779 440-444 CHEBI:22918 denotes BCAA
T22780 463-468 UBERON:0000178 denotes blood
T22781 474-475 SO_EXT:sequence_nullness_or_absence denotes -
T22782 476-477 SO_EXT:sequence_nullness_or_absence denotes -
T22783 478-482 NCBITaxon:10088 denotes mice
T22784 523-524 SO_EXT:normal_or_wild_type_or_present denotes +
T22785 525-526 SO_EXT:normal_or_wild_type_or_present denotes +
T22786 531-532 SO_EXT:normal_or_wild_type_or_present denotes +
T22787 533-534 SO_EXT:sequence_nullness_or_absence denotes -
T22788 554-558 CHEBI:22918 denotes BCAA
T22789 562-569 CHEBI_SO_EXT:alanine denotes alanine
T22790 573-578 UBERON:0000178 denotes blood
T22791 582-586 NCBITaxon:10088 denotes mice
T22792 629-630 SO_EXT:sequence_nullness_or_absence denotes -
T22793 631-632 SO_EXT:sequence_nullness_or_absence denotes -
T22794 633-637 NCBITaxon:10088 denotes mice
T22795 650-651 SO_EXT:normal_or_wild_type_or_present denotes +
T22796 652-653 SO_EXT:normal_or_wild_type_or_present denotes +
T22797 658-659 SO_EXT:normal_or_wild_type_or_present denotes +
T22798 660-661 SO_EXT:sequence_nullness_or_absence denotes -
T22799 662-666 NCBITaxon:10088 denotes mice
T22800 716-720 NCBITaxon:10088 denotes mice
T22801 763-764 SO_EXT:normal_or_wild_type_or_present denotes +
T22802 765-766 SO_EXT:normal_or_wild_type_or_present denotes +
T22803 813-814 SO_EXT:normal_or_wild_type_or_present denotes +
T22804 815-816 SO_EXT:normal_or_wild_type_or_present denotes +
T22805 821-822 SO_EXT:normal_or_wild_type_or_present denotes +
T22806 823-824 SO_EXT:sequence_nullness_or_absence denotes -

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T22732 59-65 NCBITaxon:39107 denotes murine
T22733 101-106 UBERON:0002107 denotes liver
T22734 193-197 NCBITaxon:10088 denotes mice
T22735 248-253 UBERON:0002107 denotes liver
T22736 315-320 UBERON:0002107 denotes liver
T22737 331-335 CHEBI:22918 denotes BCAA
T22738 354-359 UBERON:0000178 denotes blood
T22739 363-367 NCBITaxon:10088 denotes mice
T22740 375-379 CHEBI:22918 denotes BCAA
T22741 440-444 CHEBI:22918 denotes BCAA
T22742 463-468 UBERON:0000178 denotes blood
T22743 478-482 NCBITaxon:10088 denotes mice
T22744 554-558 CHEBI:22918 denotes BCAA
T22745 573-578 UBERON:0000178 denotes blood
T22746 582-586 NCBITaxon:10088 denotes mice
T22747 633-637 NCBITaxon:10088 denotes mice
T22748 662-666 NCBITaxon:10088 denotes mice
T22749 716-720 NCBITaxon:10088 denotes mice