PMC:1448208 / 17342-17865
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10564 | 0-9 | RB | denotes | Correctly |
T10565 | 10-18 | VBN | denotes | targeted |
T10566 | 22-27 | NNS | denotes | cells |
T10567 | 19-21 | NN | denotes | ES |
T10568 | 33-46 | VBN | denotes | microinjected |
T10569 | 28-32 | VBD | denotes | were |
T10570 | 47-51 | IN | denotes | into |
T10571 | 52-63 | NNS | denotes | blastocysts |
T10572 | 64-66 | TO | denotes | to |
T10573 | 67-74 | VB | denotes | produce |
T10574 | 75-83 | JJ | denotes | chimeric |
T10575 | 84-88 | NNS | denotes | mice |
T10576 | 88-89 | . | denotes | . |
T10577 | 89-127 | sentence | denotes | Chimerics were bred to C57BL/6J mice. |
T10578 | 90-99 | NNS | denotes | Chimerics |
T10579 | 105-109 | VBN | denotes | bred |
T10580 | 100-104 | VBD | denotes | were |
T10581 | 110-112 | IN | denotes | to |
T10582 | 113-118 | NN | denotes | C57BL |
T10583 | 119-121 | NN | denotes | 6J |
T10584 | 118-119 | HYPH | denotes | / |
T10585 | 122-126 | NNS | denotes | mice |
T10586 | 126-127 | . | denotes | . |
T10587 | 127-293 | sentence | denotes | Following germline transmission of the targeted allele, heterozygous mice were interbred to produce wild type (+/+), heterozygous (+/-) and homozygous (-/-) animals. |
T10588 | 128-137 | VBG | denotes | Following |
T10589 | 207-216 | VBN | denotes | interbred |
T10590 | 138-146 | NN | denotes | germline |
T10591 | 147-159 | NN | denotes | transmission |
T10592 | 160-162 | IN | denotes | of |
T10593 | 163-166 | DT | denotes | the |
T10594 | 176-182 | NN | denotes | allele |
T10595 | 167-175 | VBN | denotes | targeted |
T10596 | 182-184 | , | denotes | , |
T10597 | 184-196 | JJ | denotes | heterozygous |
T10598 | 197-201 | NNS | denotes | mice |
T10599 | 202-206 | VBD | denotes | were |
T10600 | 217-219 | TO | denotes | to |
T10601 | 220-227 | VB | denotes | produce |
T10602 | 228-232 | JJ | denotes | wild |
T10603 | 233-237 | NN | denotes | type |
T10604 | 285-292 | NNS | denotes | animals |
T10605 | 238-239 | -LRB- | denotes | ( |
T10606 | 241-242 | SYM | denotes | + |
T10607 | 239-240 | SYM | denotes | + |
T10608 | 240-241 | HYPH | denotes | / |
T10609 | 242-243 | -RRB- | denotes | ) |
T10610 | 243-245 | , | denotes | , |
T10611 | 245-257 | JJ | denotes | heterozygous |
T10612 | 258-259 | -LRB- | denotes | ( |
T10613 | 261-262 | SYM | denotes | - |
T10614 | 259-260 | SYM | denotes | + |
T10615 | 260-261 | HYPH | denotes | / |
T10616 | 262-263 | -RRB- | denotes | ) |
T10617 | 264-267 | CC | denotes | and |
T10618 | 268-278 | JJ | denotes | homozygous |
T10619 | 279-280 | -LRB- | denotes | ( |
T10620 | 282-283 | SYM | denotes | - |
T10621 | 280-281 | SYM | denotes | - |
T10622 | 281-282 | HYPH | denotes | / |
T10623 | 283-284 | -RRB- | denotes | ) |
T10624 | 292-293 | . | denotes | . |
T10625 | 293-340 | sentence | denotes | Mice were genotyped by Southern blot analysis. |
T10626 | 294-298 | NNS | denotes | Mice |
T10627 | 304-313 | VBN | denotes | genotyped |
T10628 | 299-303 | VBD | denotes | were |
T10629 | 314-316 | IN | denotes | by |
T10630 | 317-325 | NNP | denotes | Southern |
T10631 | 326-330 | NN | denotes | blot |
T10632 | 331-339 | NN | denotes | analysis |
T10633 | 339-340 | . | denotes | . |
T10634 | 340-523 | sentence | denotes | The Exon 6 specific probe hybridized to only a ~16 kb BglI restriction fragment in +/+ mice, a ~11 kb BglI fragment in -/- mice, and to both of these fragments in +/- mice (Fig. 1B). |
T10635 | 341-344 | DT | denotes | The |
T10636 | 361-366 | NN | denotes | probe |
T10637 | 345-349 | NN | denotes | Exon |
T10638 | 352-360 | JJ | denotes | specific |
T10639 | 350-351 | CD | denotes | 6 |
T10640 | 367-377 | VBN | denotes | hybridized |
T10641 | 378-380 | IN | denotes | to |
T10642 | 381-385 | RB | denotes | only |
T10643 | 412-420 | NN | denotes | fragment |
T10644 | 386-387 | DT | denotes | a |
T10645 | 388-389 | SYM | denotes | ~ |
T10646 | 389-391 | CD | denotes | 16 |
T10647 | 392-394 | NN | denotes | kb |
T10648 | 395-399 | NN | denotes | BglI |
T10649 | 400-411 | NN | denotes | restriction |
T10650 | 421-423 | IN | denotes | in |
T10651 | 424-425 | SYM | denotes | + |
T10652 | 426-427 | SYM | denotes | + |
T10653 | 425-426 | HYPH | denotes | / |
T10654 | 428-432 | NNS | denotes | mice |
T10655 | 432-434 | , | denotes | , |
T10656 | 434-435 | DT | denotes | a |
T10657 | 448-456 | NN | denotes | fragment |
T10658 | 436-437 | SYM | denotes | ~ |
T10659 | 437-439 | CD | denotes | 11 |
T10660 | 440-442 | NN | denotes | kb |
T10661 | 443-447 | NN | denotes | BglI |
T10662 | 457-459 | IN | denotes | in |
T10663 | 460-461 | SYM | denotes | - |
T10664 | 462-463 | SYM | denotes | - |
T10665 | 461-462 | HYPH | denotes | / |
T10666 | 464-468 | NNS | denotes | mice |
T10667 | 468-470 | , | denotes | , |
T10668 | 470-473 | CC | denotes | and |
T10669 | 474-476 | IN | denotes | to |
T10670 | 477-481 | DT | denotes | both |
T10671 | 482-484 | IN | denotes | of |
T10672 | 485-490 | DT | denotes | these |
T10673 | 491-500 | NNS | denotes | fragments |
T10674 | 501-503 | IN | denotes | in |
T10675 | 504-505 | SYM | denotes | + |
T10676 | 506-507 | SYM | denotes | - |
T10677 | 505-506 | HYPH | denotes | / |
T10678 | 508-512 | NNS | denotes | mice |
T10679 | 513-514 | -LRB- | denotes | ( |
T10680 | 519-521 | NN | denotes | 1B |
T10681 | 514-518 | NN | denotes | Fig. |
T10682 | 521-522 | -RRB- | denotes | ) |
T10683 | 522-523 | . | denotes | . |
R2959 | T10564 | T10565 | advmod | Correctly,targeted |
R2960 | T10565 | T10566 | amod | targeted,cells |
R2961 | T10566 | T10568 | nsubjpass | cells,microinjected |
R2962 | T10567 | T10566 | compound | ES,cells |
R2963 | T10569 | T10568 | auxpass | were,microinjected |
R2964 | T10570 | T10568 | prep | into,microinjected |
R2965 | T10571 | T10570 | pobj | blastocysts,into |
R2966 | T10572 | T10573 | aux | to,produce |
R2967 | T10573 | T10568 | advcl | produce,microinjected |
R2968 | T10574 | T10575 | amod | chimeric,mice |
R2969 | T10575 | T10573 | dobj | mice,produce |
R2970 | T10576 | T10568 | punct | .,microinjected |
R2971 | T10578 | T10579 | nsubjpass | Chimerics,bred |
R2972 | T10580 | T10579 | auxpass | were,bred |
R2973 | T10581 | T10579 | prep | to,bred |
R2974 | T10582 | T10583 | compound | C57BL,6J |
R2975 | T10583 | T10585 | compound | 6J,mice |
R2976 | T10584 | T10583 | punct | /,6J |
R2977 | T10585 | T10581 | pobj | mice,to |
R2978 | T10586 | T10579 | punct | .,bred |
R2979 | T10588 | T10589 | prep | Following,interbred |
R2980 | T10590 | T10591 | compound | germline,transmission |
R2981 | T10591 | T10588 | pobj | transmission,Following |
R2982 | T10592 | T10591 | prep | of,transmission |
R2983 | T10593 | T10594 | det | the,allele |
R2984 | T10594 | T10592 | pobj | allele,of |
R2985 | T10595 | T10594 | amod | targeted,allele |
R2986 | T10596 | T10589 | punct | ", ",interbred |
R2987 | T10597 | T10598 | amod | heterozygous,mice |
R2988 | T10598 | T10589 | nsubjpass | mice,interbred |
R2989 | T10599 | T10589 | auxpass | were,interbred |
R2990 | T10600 | T10601 | aux | to,produce |
R2991 | T10601 | T10589 | advcl | produce,interbred |
R2992 | T10602 | T10603 | amod | wild,type |
R2993 | T10603 | T10604 | nmod | type,animals |
R2994 | T10604 | T10601 | dobj | animals,produce |
R2995 | T10605 | T10606 | punct | (,+ |
R2996 | T10606 | T10603 | punct | +,type |
R2997 | T10607 | T10606 | punct | +,+ |
R2998 | T10608 | T10606 | punct | /,+ |
R2999 | T10609 | T10606 | punct | ),+ |
R3000 | T10610 | T10603 | punct | ", ",type |
R3001 | T10611 | T10603 | conj | heterozygous,type |
R3002 | T10612 | T10613 | punct | (,- |
R3003 | T10613 | T10611 | punct | -,heterozygous |
R3004 | T10614 | T10613 | punct | +,- |
R3005 | T10615 | T10613 | punct | /,- |
R3006 | T10616 | T10613 | punct | ),- |
R3007 | T10617 | T10611 | cc | and,heterozygous |
R3008 | T10618 | T10611 | conj | homozygous,heterozygous |
R3009 | T10619 | T10620 | punct | (,- |
R3010 | T10620 | T10618 | punct | -,homozygous |
R3011 | T10621 | T10620 | punct | -,- |
R3012 | T10622 | T10620 | punct | /,- |
R3013 | T10623 | T10620 | punct | ),- |
R3014 | T10624 | T10589 | punct | .,interbred |
R3015 | T10626 | T10627 | nsubjpass | Mice,genotyped |
R3016 | T10628 | T10627 | auxpass | were,genotyped |
R3017 | T10629 | T10627 | prep | by,genotyped |
R3018 | T10630 | T10631 | compound | Southern,blot |
R3019 | T10631 | T10632 | compound | blot,analysis |
R3020 | T10632 | T10629 | pobj | analysis,by |
R3021 | T10633 | T10627 | punct | .,genotyped |
R3022 | T10635 | T10636 | det | The,probe |
R3023 | T10636 | T10640 | nsubj | probe,hybridized |
R3024 | T10637 | T10638 | npadvmod | Exon,specific |
R3025 | T10638 | T10636 | amod | specific,probe |
R3026 | T10639 | T10637 | nummod | 6,Exon |
R3027 | T10641 | T10640 | prep | to,hybridized |
R3028 | T10642 | T10643 | advmod | only,fragment |
R3029 | T10643 | T10641 | pobj | fragment,to |
R3030 | T10644 | T10643 | det | a,fragment |
R3031 | T10645 | T10646 | punct | ~,16 |
R3032 | T10646 | T10647 | nummod | 16,kb |
R3033 | T10647 | T10643 | compound | kb,fragment |
R3034 | T10648 | T10643 | compound | BglI,fragment |
R3035 | T10649 | T10643 | compound | restriction,fragment |
R3036 | T10650 | T10643 | prep | in,fragment |
R3037 | T10651 | T10652 | punct | +,+ |
R3038 | T10652 | T10654 | punct | +,mice |
R3039 | T10653 | T10652 | punct | /,+ |
R3040 | T10654 | T10650 | pobj | mice,in |
R3041 | T10655 | T10643 | punct | ", ",fragment |
R3042 | T10656 | T10657 | det | a,fragment |
R3043 | T10657 | T10643 | appos | fragment,fragment |
R3044 | T10658 | T10659 | punct | ~,11 |
R3045 | T10659 | T10660 | nummod | 11,kb |
R3046 | T10660 | T10657 | compound | kb,fragment |
R3047 | T10661 | T10657 | compound | BglI,fragment |
R3048 | T10662 | T10657 | prep | in,fragment |
R3049 | T10663 | T10664 | punct | -,- |
R3050 | T10664 | T10666 | punct | -,mice |
R3051 | T10665 | T10664 | punct | /,- |
R3052 | T10666 | T10662 | pobj | mice,in |
R3053 | T10667 | T10641 | punct | ", ",to |
R3054 | T10668 | T10641 | cc | and,to |
R3055 | T10669 | T10641 | conj | to,to |
R3056 | T10670 | T10669 | pobj | both,to |
R3057 | T10671 | T10670 | prep | of,both |
R3058 | T10672 | T10673 | det | these,fragments |
R3059 | T10673 | T10671 | pobj | fragments,of |
R3060 | T10674 | T10670 | prep | in,both |
R3061 | T10675 | T10676 | punct | +,- |
R3062 | T10676 | T10678 | punct | -,mice |
R3063 | T10677 | T10676 | punct | /,- |
R3064 | T10678 | T10674 | pobj | mice,in |
R3065 | T10679 | T10680 | punct | (,1B |
R3066 | T10680 | T10640 | parataxis | 1B,hybridized |
R3067 | T10681 | T10680 | compound | Fig.,1B |
R3068 | T10682 | T10680 | punct | ),1B |
R3069 | T10683 | T10640 | punct | .,hybridized |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10278 | 19-27 | CL:0002322 | denotes | ES cells |
T10279 | 22-27 | CL_GO_EXT:cell | denotes | cells |
T10280 | 52-63 | UBERON:0000358 | denotes | blastocysts |
T10281 | 84-88 | NCBITaxon:10088 | denotes | mice |
T10282 | 105-109 | GO_EXT:breeding | denotes | bred |
T10283 | 122-126 | NCBITaxon:10088 | denotes | mice |
T10284 | 176-182 | SO_EXT:0001023 | denotes | allele |
T10285 | 197-201 | NCBITaxon:10088 | denotes | mice |
T10286 | 212-216 | GO_EXT:breeding | denotes | bred |
T10287 | 228-237 | SO_EXT:wild_type_entity_or_quality | denotes | wild type |
T10288 | 239-240 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
T10289 | 241-242 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
T10290 | 259-260 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
T10291 | 261-262 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T10292 | 280-281 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T10293 | 282-283 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T10294 | 285-292 | NCBITaxon:33208 | denotes | animals |
T10295 | 294-298 | NCBITaxon:10088 | denotes | Mice |
T10296 | 345-349 | SO_EXT:0000147 | denotes | Exon |
T10297 | 361-366 | CHEBI_SO_EXT:molecular_probe | denotes | probe |
T10298 | 367-377 | GO:0097617 | denotes | hybridized |
T10299 | 393-394 | CHEBI_SO_EXT:base | denotes | b |
T10300 | 400-420 | SO_EXT:0000412 | denotes | restriction fragment |
T10301 | 424-425 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
T10302 | 426-427 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
T10303 | 428-432 | NCBITaxon:10088 | denotes | mice |
T10304 | 441-442 | CHEBI_SO_EXT:base | denotes | b |
T10305 | 460-461 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T10306 | 462-463 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T10307 | 464-468 | NCBITaxon:10088 | denotes | mice |
T10308 | 504-505 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
T10309 | 506-507 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T10310 | 508-512 | NCBITaxon:10088 | denotes | mice |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T10195 | 19-27 | CL:0002322 | denotes | ES cells |
T10196 | 52-63 | UBERON:0000358 | denotes | blastocysts |
T10197 | 84-88 | NCBITaxon:10088 | denotes | mice |
T10198 | 122-126 | NCBITaxon:10088 | denotes | mice |
T10199 | 176-182 | SO:0001023 | denotes | allele |
T10200 | 197-201 | NCBITaxon:10088 | denotes | mice |
T10201 | 285-292 | NCBITaxon:33208 | denotes | animals |
T10202 | 294-298 | NCBITaxon:10088 | denotes | Mice |
T10203 | 345-349 | SO:0000147 | denotes | Exon |
T10204 | 367-377 | GO:0097617 | denotes | hybridized |
T10205 | 400-420 | SO:0000412 | denotes | restriction fragment |
T10206 | 428-432 | NCBITaxon:10088 | denotes | mice |
T10207 | 464-468 | NCBITaxon:10088 | denotes | mice |
T10208 | 508-512 | NCBITaxon:10088 | denotes | mice |