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PMC:1448208 / 16547-16732 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T10409 0-185 sentence denotes The gene targeting construct was designed to replace a 1.67 kb EcoRV/Smal genomic DNA fragment encompassing part of Exon 4 and all of Exon 5 with the PGKneo selectable marker cassette.
T10410 1-4 DT denotes The
T10411 20-29 NN denotes construct
T10412 5-9 NN denotes gene
T10413 10-19 NN denotes targeting
T10414 34-42 VBN denotes designed
T10415 30-33 VBD denotes was
T10416 43-45 TO denotes to
T10417 46-53 VB denotes replace
T10418 54-55 DT denotes a
T10419 87-95 NN denotes fragment
T10420 56-60 CD denotes 1.67
T10421 61-63 NN denotes kb
T10422 64-69 NN denotes EcoRV
T10423 70-74 NN denotes Smal
T10424 69-70 HYPH denotes /
T10425 75-82 JJ denotes genomic
T10426 83-86 NN denotes DNA
T10427 96-108 VBG denotes encompassing
T10428 109-113 NN denotes part
T10429 114-116 IN denotes of
T10430 117-121 NN denotes Exon
T10431 122-123 CD denotes 4
T10432 124-127 CC denotes and
T10433 128-131 DT denotes all
T10434 132-134 IN denotes of
T10435 135-139 NN denotes Exon
T10436 140-141 CD denotes 5
T10437 142-146 IN denotes with
T10438 147-150 DT denotes the
T10439 176-184 NN denotes cassette
T10440 151-157 NN denotes PGKneo
T10441 158-168 JJ denotes selectable
T10442 169-175 NN denotes marker
T10443 184-185 . denotes .
R2815 T10410 T10411 det The,construct
R2816 T10411 T10414 nsubjpass construct,designed
R2817 T10412 T10413 compound gene,targeting
R2818 T10413 T10411 compound targeting,construct
R2819 T10415 T10414 auxpass was,designed
R2820 T10416 T10417 aux to,replace
R2821 T10417 T10414 advcl replace,designed
R2822 T10418 T10419 det a,fragment
R2823 T10419 T10417 dobj fragment,replace
R2824 T10420 T10421 nummod 1.67,kb
R2825 T10421 T10419 nmod kb,fragment
R2826 T10422 T10423 nmod EcoRV,Smal
R2827 T10423 T10419 nmod Smal,fragment
R2828 T10424 T10423 punct /,Smal
R2829 T10425 T10419 amod genomic,fragment
R2830 T10426 T10419 compound DNA,fragment
R2831 T10427 T10419 acl encompassing,fragment
R2832 T10428 T10427 dobj part,encompassing
R2833 T10429 T10428 prep of,part
R2834 T10430 T10429 pobj Exon,of
R2835 T10431 T10430 nummod 4,Exon
R2836 T10432 T10428 cc and,part
R2837 T10433 T10428 conj all,part
R2838 T10434 T10433 prep of,all
R2839 T10435 T10434 pobj Exon,of
R2840 T10436 T10435 nummod 5,Exon
R2841 T10437 T10417 prep with,replace
R2842 T10438 T10439 det the,cassette
R2843 T10439 T10437 pobj cassette,with
R2844 T10440 T10439 nmod PGKneo,cassette
R2845 T10441 T10439 amod selectable,cassette
R2846 T10442 T10439 compound marker,cassette
R2847 T10443 T10414 punct .,designed

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T10243 5-9 SO_EXT:0000704 denotes gene
T10244 20-29 SO_EXT:engineered_biological_sequence denotes construct
T10245 46-53 SO_EXT:sequence_substitution_process denotes replace
T10246 62-63 CHEBI_SO_EXT:base denotes b
T10247 75-86 SO_EXT:genomic_DNA denotes genomic DNA
T10248 83-86 CHEBI_SO_EXT:DNA denotes DNA
T10249 109-121 SO_EXT:0000852 denotes part of Exon
T10250 135-139 SO_EXT:0000147 denotes Exon
T10251 169-175 CHEBI_SO_EXT:molecular_indicator_or_label_or_marker_or_tag denotes marker

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T10178 5-9 SO:0000704 denotes gene
T10179 75-82 SO:0001026 denotes genomic
T10180 109-121 SO:0000852 denotes part of Exon
T10181 135-139 SO:0000147 denotes Exon