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PMC:1447668 / 440-615 JSONTXT

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bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T958 18-23 Protein denotes Foxp3
T959 27-35 Protein denotes HEK 293T
T960 49-53 Protein denotes CD4+
T961 138-155 Protein denotes nuclear factor-κB
T962 157-162 Protein denotes NF-κB
T963 0-14 Positive_regulation denotes Overexpression
T964 0-14 Positive_regulation denotes Overexpression
T965 164-174 Positive_regulation denotes activation
T966 164-174 Positive_regulation denotes activation
T967 110-118 Negative_regulation denotes decrease
T968 110-118 Negative_regulation denotes decrease
R671 T958 T963 themeOf Foxp3,Overexpression
R672 T959 T964 themeOf HEK 293T,Overexpression
R673 T961 T965 themeOf nuclear factor-κB,activation
R677 T962 T966 themeOf NF-κB,activation
R678 T965 T967 themeOf activation,decrease
R680 T966 T968 themeOf activation,decrease

sentences

Id Subject Object Predicate Lexical cue
T116 0-175 Sentence denotes Overexpression of Foxp3 in HEK 293T and purified CD4+ T cells resulted in a dose-dependent and time-dependent decrease in basal levels of nuclear factor-κB (NF-κB) activation.
T5 0-175 Sentence denotes Overexpression of Foxp3 in HEK 293T and purified CD4+ T cells resulted in a dose-dependent and time-dependent decrease in basal levels of nuclear factor-κB (NF-κB) activation.

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T436 0-14 NN denotes Overexpression
T437 15-17 IN denotes of
T438 18-23 NN denotes Foxp3
T439 24-26 IN denotes in
T440 27-30 NN denotes HEK
T441 31-35 NN denotes 293T
T442 36-39 CC denotes and
T443 40-48 VB denotes purified
T444 49-53 JJ denotes CD4+
T445 54-55 NN denotes T
T446 56-61 NN denotes cells
T447 62-70 VB denotes resulted
T448 71-73 IN denotes in
T449 74-75 DT denotes a
T450 76-90 JJ denotes dose-dependent
T451 91-94 CC denotes and
T452 95-109 JJ denotes time-dependent
T453 110-118 NN denotes decrease
T454 119-121 IN denotes in
T455 122-127 JJ denotes basal
T456 128-134 NN denotes levels
T457 135-137 IN denotes of
T458 138-145 JJ denotes nuclear
T459 146-155 NN denotes factor-κB
T460 156-157 -LRB- denotes (
T461 157-162 NN denotes NF-κB
T462 162-163 -RRB- denotes )
T463 164-174 NN denotes activation
R358 T436 T437 arg1Of Overexpression,of
R359 T436 T439 arg1Of Overexpression,in
R360 T436 T447 arg1Of Overexpression,resulted
R361 T438 T437 arg2Of Foxp3,of
R363 T441 T440 arg1Of 293T,HEK
R364 T441 T442 arg1Of 293T,and
R366 T442 T439 arg2Of and,in
R370 T446 T442 arg2Of cells,and
R371 T446 T443 arg2Of cells,purified
R372 T446 T444 arg1Of cells,CD4+
R373 T446 T445 arg1Of cells,T
R374 T447 T448 arg1Of resulted,in
R377 T450 T451 arg1Of dose-dependent,and
R379 T452 T451 arg2Of time-dependent,and
R381 T453 T448 arg2Of decrease,in
R382 T453 T449 arg1Of decrease,a
R383 T453 T450 arg1Of decrease,dose-dependent
R384 T453 T452 arg1Of decrease,time-dependent
R385 T453 T454 arg1Of decrease,in
R387 T456 T454 arg2Of levels,in
R388 T456 T455 arg1Of levels,basal
R389 T456 T457 arg1Of levels,of
R393 T461 T460 arg2Of NF-κB,(
R394 T462 T460 arg3Of ),(
R395 T463 T457 arg2Of activation,of
R396 T463 T458 arg1Of activation,nuclear
R397 T463 T459 arg1Of activation,factor-κB
R398 T463 T460 arg1Of activation,(

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T190 0-14 NNP denotes Overexpression
T191 15-17 IN denotes of
T192 18-23 NNP denotes Foxp3
T193 24-26 IN denotes in
T194 27-30 NNP denotes HEK
T195 31-35 CD denotes 293T
T196 36-39 CC denotes and
T197 40-48 VBD denotes purified
T198 49-52 NNP denotes CD4
T199 52-53 NNP denotes +
T200 54-55 NNP denotes T
T201 56-61 NNS denotes cells
T202 62-70 VBD denotes resulted
T203 71-73 IN denotes in
T204 74-75 DT denotes a
T205 76-90 JJ denotes dose-dependent
T206 91-94 CC denotes and
T207 95-109 JJ denotes time-dependent
T208 110-118 NN denotes decrease
T209 119-121 IN denotes in
T210 122-127 JJ denotes basal
T211 128-134 NNS denotes levels
T212 135-137 IN denotes of
T213 138-145 JJ denotes nuclear
T214 146-155 NNP denotes factor-κB
T215 156-157 -LRB- denotes (
T216 157-162 NNP denotes NF-κB
T217 162-163 -RRB- denotes )
T218 164-174 NN denotes activation
T219 174-175 . denotes .
R111 T190 T197 nsubj Overexpression,purified
R112 T191 T190 prep of,Overexpression
R113 T192 T191 pobj Foxp3,of
R114 T193 T190 prep in,Overexpression
R115 T194 T193 pobj HEK,in
R116 T195 T194 nummod 293T,HEK
R117 T196 T190 cc and,Overexpression
R118 T197 T197 ROOT purified,purified
R119 T198 T201 compound CD4,cells
R120 T199 T201 compound +,cells
R121 T200 T201 compound T,cells
R122 T201 T197 dobj cells,purified
R123 T202 T197 conj resulted,purified
R124 T203 T202 prep in,resulted
R125 T204 T208 det a,decrease
R126 T205 T208 amod dose-dependent,decrease
R127 T206 T205 cc and,dose-dependent
R128 T207 T205 conj time-dependent,dose-dependent
R129 T208 T203 pobj decrease,in
R130 T209 T208 prep in,decrease
R131 T210 T211 amod basal,levels
R132 T211 T209 pobj levels,in
R133 T212 T211 prep of,levels
R134 T213 T214 amod nuclear,factor-κB
R135 T214 T212 pobj factor-κB,of
R136 T215 T214 punct (,factor-κB
R137 T216 T214 appos NF-κB,factor-κB
R138 T217 T214 punct ),factor-κB
R139 T218 T212 pobj activation,of
R140 T219 T197 punct .,purified

GO-BP

Id Subject Object Predicate Lexical cue
T129 157-174 http://purl.obolibrary.org/obo/GO_0051092 denotes NF-κB) activation

GO-CC

Id Subject Object Predicate Lexical cue
T667 56-61 http://purl.obolibrary.org/obo/GO_0005623 denotes cells

events-check-again

Id Subject Object Predicate Lexical cue
T912 49-52 Protein denotes CD4
T913 110-118 Negative_regulation denotes decrease
T914 138-155 Protein denotes nuclear factor-κB
T915 157-162 Protein denotes NF-κB
T916 164-174 Positive_regulation denotes activation
T910 0-14 Positive_regulation denotes Overexpression
T911 18-23 Protein denotes Foxp3
R604 T914 T916 themeOf nuclear factor-κB,activation
R605 T915 T914 equivalentTo NF-κB,nuclear factor-κB
R606 T916 T913 themeOf activation,decrease
R731 T911 T910 themeOf Foxp3,Overexpression

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T67 0-14 Positive_regulation denotes Overexpression
T85 18-23 Protein denotes Foxp3
T86 49-52 Protein denotes CD4
T94 138-155 Protein denotes nuclear factor-κB
T95 157-162 Protein denotes NF-κB
T96 164-174 Positive_regulation denotes activation
T105 110-118 Negative_regulation denotes decrease
R38 T85 T67 themeOf Foxp3,Overexpression
R45 T94 T96 themeOf nuclear factor-κB,activation
R46 T95 T94 equivalentTo NF-κB,nuclear factor-κB
R47 T96 T105 themeOf activation,decrease

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T624 18-23 Q9BZS1 denotes Foxp3
T625 49-52 P01730 denotes CD4

test2

Id Subject Object Predicate Lexical cue
T33 0-14 Positive_regulation denotes Overexpression
T34 18-23 Protein denotes Foxp3
T35 49-52 Protein denotes CD4
T36 100-109 Regulation denotes dependent
T37 110-118 Negative_regulation denotes decrease
T38 138-155 Protein denotes nuclear factor-κB
T39 157-162 Protein denotes NF-κB
R14 T34 T33 themeOf Foxp3,Overexpression
R15 T39 T38 equivalentTo NF-κB,nuclear factor-κB