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PMC:1447668 / 0-198 JSONTXT

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bionlp-st-ge-2016-reference-tees

Id Subject Object Predicate Lexical cue
T948 0-5 Protein denotes Foxp3
T949 59-64 Protein denotes NF-κB
T950 69-73 Protein denotes CREB
T951 44-53 Binding denotes Targeting
T952 44-53 Binding denotes Targeting
T953 44-53 Binding denotes Targeting
T954 135-147 Protein denotes Forkhead box
T955 149-152 Protein denotes Fox
R654 T948 T951 themeOf Foxp3,Targeting
R663 T948 T952 themeOf Foxp3,Targeting
R668 T948 T953 themeOf Foxp3,Targeting
R669 T949 T952 themeOf NF-κB,Targeting
R670 T950 T953 themeOf CREB,Targeting

sentences

Id Subject Object Predicate Lexical cue
T113 0-82 Sentence denotes Foxp3 Represses Retroviral Transcription by Targeting Both NF-κB and CREB Pathways
T1 0-123 Sentence denotes Foxp3 Represses Retroviral Transcription by Targeting Both NF-κB and CREB Pathways Foxp3 Suppresses NF-κB and CREB Pathways
T2 126-134 Sentence denotes Abstract

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T383 0-5 CD denotes Foxp3
T384 6-15 VB denotes Represses
T385 16-26 JJ denotes Retroviral
T386 27-40 NN denotes Transcription
T387 41-43 IN denotes by
T388 44-53 VB denotes Targeting
T389 54-58 CC denotes Both
T390 59-64 NN denotes NF-κB
T391 65-68 CC denotes and
T392 69-73 NN denotes CREB
T393 74-82 NN denotes Pathways
T394 135-143 NN denotes Forkhead
T395 144-147 NN denotes box
T396 148-149 -LRB- denotes (
T397 149-152 NN denotes Fox
T398 152-153 -RRB- denotes )
T399 153-166 JJ denotes /winged-helix
T400 167-180 NN denotes transcription
T401 181-188 NN denotes factors
T402 189-197 VB denotes regulate
R304 T383 T384 arg1Of Foxp3,Represses
R305 T383 T388 arg1Of Foxp3,Targeting
R306 T384 T387 arg1Of Represses,by
R307 T397 T396 arg2Of Fox,(
R308 T386 T384 arg2Of Transcription,Represses
R309 T398 T396 arg3Of ),(
R310 T386 T385 arg1Of Transcription,Retroviral
R311 T401 T394 arg1Of factors,Forkhead
R312 T401 T395 arg1Of factors,box
R313 T401 T396 arg1Of factors,(
R314 T401 T399 arg1Of factors,/winged-helix
R315 T401 T400 arg1Of factors,transcription
R316 T401 T402 arg1Of factors,regulate
R318 T388 T387 arg2Of Targeting,by
R324 T390 T391 arg1Of NF-κB,and
R330 T391 T388 arg2Of and,Targeting
R331 T391 T389 arg1Of and,Both
R337 T393 T391 arg2Of Pathways,and
R342 T393 T392 arg1Of Pathways,CREB

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T134 0-5 CD denotes Foxp3
T135 6-15 NNPS denotes Represses
T136 16-26 NNP denotes Retroviral
T137 27-40 NNP denotes Transcription
T138 41-43 IN denotes by
T139 44-53 NNP denotes Targeting
T140 54-58 CC denotes Both
T141 59-64 NNP denotes NF-κB
T142 65-68 CC denotes and
T143 69-73 NNP denotes CREB
T144 74-82 NNPS denotes Pathways
T145 135-143 NNP denotes Forkhead
T146 144-147 NN denotes box
T147 148-149 -LRB- denotes (
T148 149-152 NNP denotes Fox
T149 152-153 -RRB- denotes )
T150 153-154 VBP denotes /
T151 154-166 JJ denotes winged-helix
T152 167-180 NN denotes transcription
T153 181-188 NNS denotes factors
T154 189-197 VB denotes regulate
R55 T134 T137 nummod Foxp3,Transcription
R56 T135 T137 compound Represses,Transcription
R57 T136 T137 compound Retroviral,Transcription
R58 T137 T154 dep Transcription,regulate
R59 T138 T137 prep by,Transcription
R60 T139 T138 pobj Targeting,by
R61 T140 T139 cc Both,Targeting
R62 T141 T146 nmod NF-κB,box
R63 T142 T141 cc and,NF-κB
R64 T143 T141 conj CREB,NF-κB
R65 T144 T146 compound Pathways,box
R66 T145 T146 compound Forkhead,box
R67 T146 T137 conj box,Transcription
R68 T147 T148 punct (,Fox
R69 T148 T146 appos Fox,box
R70 T149 T146 punct ),box
R71 T150 T154 advmod /,regulate
R72 T151 T153 amod winged-helix,factors
R73 T152 T153 compound transcription,factors
R74 T153 T154 nsubj factors,regulate
R75 T154 T154 ROOT regulate,regulate

UBERON-AE

Id Subject Object Predicate Lexical cue
T25 154-160 http://purl.obolibrary.org/obo/UBERON_0000023 denotes winged
T66 161-166 http://purl.obolibrary.org/obo/UBERON_0002488 denotes helix

GO-BP

Id Subject Object Predicate Lexical cue
T122 27-40 http://purl.obolibrary.org/obo/GO_0006351 denotes Transcription
T123 167-180 http://purl.obolibrary.org/obo/GO_0006351 denotes transcription

events-check-again

Id Subject Object Predicate Lexical cue
T902 0-5 Protein denotes Foxp3
T903 6-15 Negative_regulation denotes Represses
T904 6-15 Negative_regulation denotes Represses
T905 59-64 Protein denotes NF-κB
T906 69-73 Protein denotes CREB
T907 135-188 Protein denotes Forkhead box (Fox)/winged-helix transcription factors
R726 T902 T903 causeOf Foxp3,Represses
R727 T902 T904 causeOf Foxp3,Represses
R729 T905 T904 themeOf NF-κB,Represses
R730 T906 T903 themeOf CREB,Represses

bionlp-st-ge-2016-reference

Id Subject Object Predicate Lexical cue
T75 0-5 Protein denotes Foxp3
T91 59-64 Protein denotes NF-κB
T92 69-73 Protein denotes CREB
T93 135-188 Protein denotes Forkhead box (Fox)/winged-helix transcription factors
T111 6-15 Negative_regulation denotes Represses
T112 6-15 Negative_regulation denotes Represses
R43 T91 T112 themeOf NF-κB,Represses
R44 T92 T111 themeOf CREB,Represses
R28 T75 T111 causeOf Foxp3,Represses
R29 T75 T112 causeOf Foxp3,Represses

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T615 0-5 Q9BZS1 denotes Foxp3
T616 69-73 P15336 denotes CREB
T617 69-73 Q8TEY5 denotes CREB
T618 69-73 P18848 denotes CREB
T619 69-73 P16220 denotes CREB
T620 69-73 Q02930 denotes CREB
T621 69-73 O43889 denotes CREB

test2

Id Subject Object Predicate Lexical cue
T26 0-5 Protein denotes Foxp3
T27 59-64 Protein denotes NF-κB
T28 69-73 Protein denotes CREB
T29 135-188 Protein denotes Forkhead box (Fox)/winged-helix transcription factors