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PMC:1440874 / 7181-7424 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T1650 0-243 sentence denotes Exon 18 encodes the first of the seven motifs composing the conserved SNF2-like domain of Atrx (Figure 1); mutation of the corresponding motif of the yeast SNF2 protein has been shown to severely impair SWI/SNF-dependent gene expression [12].
T1651 1-5 NN denotes Exon
T1652 9-16 VBZ denotes encodes
T1653 6-8 CD denotes 18
T1654 179-184 VBN denotes shown
T1655 17-20 DT denotes the
T1656 21-26 JJ denotes first
T1657 27-29 IN denotes of
T1658 30-33 DT denotes the
T1659 40-46 NNS denotes motifs
T1660 34-39 CD denotes seven
T1661 47-56 VBG denotes composing
T1662 57-60 DT denotes the
T1663 81-87 NN denotes domain
T1664 61-70 VBN denotes conserved
T1665 71-75 NN denotes SNF2
T1666 76-80 JJ denotes like
T1667 75-76 HYPH denotes -
T1668 88-90 IN denotes of
T1669 91-95 NN denotes Atrx
T1670 96-97 -LRB- denotes (
T1671 97-103 NN denotes Figure
T1672 104-105 CD denotes 1
T1673 105-106 -RRB- denotes )
T1674 106-107 : denotes ;
T1675 108-116 NN denotes mutation
T1676 117-119 IN denotes of
T1677 120-123 DT denotes the
T1678 138-143 NN denotes motif
T1679 124-137 VBG denotes corresponding
T1680 144-146 IN denotes of
T1681 147-150 DT denotes the
T1682 162-169 NN denotes protein
T1683 151-156 NN denotes yeast
T1684 157-161 NN denotes SNF2
T1685 170-173 VBZ denotes has
T1686 174-178 VBN denotes been
T1687 185-187 TO denotes to
T1688 197-203 VB denotes impair
T1689 188-196 RB denotes severely
T1690 204-207 NN denotes SWI
T1691 208-211 NN denotes SNF
T1692 207-208 HYPH denotes /
T1693 212-221 JJ denotes dependent
T1694 211-212 HYPH denotes -
T1695 227-237 NN denotes expression
T1696 222-226 NN denotes gene
T1697 238-239 -LRB- denotes [
T1698 239-241 CD denotes 12
T1699 241-242 -RRB- denotes ]
T1700 242-243 . denotes .
R901 T1651 T1652 nsubj Exon,encodes
R902 T1652 T1654 ccomp encodes,shown
R903 T1653 T1651 nummod 18,Exon
R904 T1655 T1656 det the,first
R905 T1656 T1652 dobj first,encodes
R906 T1657 T1656 prep of,first
R907 T1658 T1659 det the,motifs
R908 T1659 T1657 pobj motifs,of
R909 T1660 T1659 nummod seven,motifs
R910 T1661 T1656 acl composing,first
R911 T1662 T1663 det the,domain
R912 T1663 T1661 dobj domain,composing
R913 T1664 T1663 amod conserved,domain
R914 T1665 T1666 npadvmod SNF2,like
R915 T1666 T1663 amod like,domain
R916 T1667 T1666 punct -,like
R917 T1668 T1663 prep of,domain
R918 T1669 T1668 pobj Atrx,of
R919 T1670 T1671 punct (,Figure
R920 T1671 T1652 parataxis Figure,encodes
R921 T1672 T1671 nummod 1,Figure
R922 T1673 T1671 punct ),Figure
R923 T1674 T1654 punct ;,shown
R924 T1675 T1654 nsubjpass mutation,shown
R925 T1676 T1675 prep of,mutation
R926 T1677 T1678 det the,motif
R927 T1678 T1676 pobj motif,of
R928 T1679 T1678 amod corresponding,motif
R929 T1680 T1678 prep of,motif
R930 T1681 T1682 det the,protein
R931 T1682 T1680 pobj protein,of
R932 T1683 T1682 compound yeast,protein
R933 T1684 T1682 compound SNF2,protein
R934 T1685 T1654 aux has,shown
R935 T1686 T1654 auxpass been,shown
R936 T1687 T1688 aux to,impair
R937 T1688 T1654 xcomp impair,shown
R938 T1689 T1688 advmod severely,impair
R939 T1690 T1691 compound SWI,SNF
R940 T1691 T1693 npadvmod SNF,dependent
R941 T1692 T1691 punct /,SNF
R942 T1693 T1695 amod dependent,expression
R943 T1694 T1693 punct -,dependent
R944 T1695 T1688 dobj expression,impair
R945 T1696 T1695 compound gene,expression
R946 T1697 T1698 punct [,12
R947 T1698 T1654 parataxis 12,shown
R948 T1699 T1698 punct ],12
R949 T1700 T1654 punct .,shown

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1486 1-5 SO_EXT:0000147 denotes Exon
T1487 9-16 SO_EXT:sequence_coding_function denotes encodes
T1488 40-46 SO_EXT:sequence_or_structure_motif denotes motifs
T1489 61-70 SO_EXT:biological_conservation_process_or_quality denotes conserved
T1490 71-75 PR_EXT:P22082 denotes SNF2
T1491 81-87 SO_EXT:0000417 denotes domain
T1492 91-95 PR_EXT:000004503 denotes Atrx
T1493 108-116 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T1494 138-143 SO_EXT:sequence_or_structure_motif denotes motif
T1495 151-156 NCBITaxon_EXT:yeast denotes yeast
T1496 157-161 PR_EXT:P22082 denotes SNF2
T1497 162-169 CHEBI_PR_EXT:protein denotes protein
T1498 204-211 GO:0016514 denotes SWI/SNF
T1499 222-226 SO_EXT:0000704 denotes gene
T1500 222-237 GO:0010467 denotes gene expression

2_test

Id Subject Object Predicate Lexical cue
16628246-8871545-85799746 239-241 8871545 denotes 12
T3548 239-241 8871545 denotes 12

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T1406 1-5 SO:0000147 denotes Exon
T1407 71-75 PR:P22082 denotes SNF2
T1408 81-87 SO:0000417 denotes domain
T1409 91-95 PR:000004503 denotes Atrx
T1410 157-161 PR:P22082 denotes SNF2
T1411 204-211 GO:0016514 denotes SWI/SNF
T1412 222-226 SO:0000704 denotes gene
T1413 222-237 GO:0010467 denotes gene expression