Id |
Subject |
Object |
Predicate |
Lexical cue |
T12623 |
0-10 |
NN |
denotes |
Blastocyst |
T12624 |
11-20 |
NN |
denotes |
outgrowth |
T12625 |
21-29 |
NNS |
denotes |
cultures |
T12626 |
29-30 |
. |
denotes |
. |
T12627 |
30-224 |
sentence |
denotes |
Superovulated heterozygous female mice (Atrx WT/flox) were mated to homozygous GATA1-cre +/+ transgenic males, and blastocysts were flushed from uterine horns with M2 medium (Sigma) at 3.5 dpc. |
T12628 |
31-44 |
VBN |
denotes |
Superovulated |
T12629 |
65-69 |
NNS |
denotes |
mice |
T12630 |
45-57 |
JJ |
denotes |
heterozygous |
T12631 |
58-64 |
JJ |
denotes |
female |
T12632 |
90-95 |
VBN |
denotes |
mated |
T12633 |
70-71 |
-LRB- |
denotes |
( |
T12634 |
79-83 |
NN |
denotes |
flox |
T12635 |
71-78 |
NN |
denotes |
Atrx WT |
T12636 |
78-79 |
HYPH |
denotes |
/ |
T12637 |
83-84 |
-RRB- |
denotes |
) |
T12638 |
85-89 |
VBD |
denotes |
were |
T12639 |
96-98 |
IN |
denotes |
to |
T12640 |
99-109 |
JJ |
denotes |
homozygous |
T12641 |
135-140 |
NNS |
denotes |
males |
T12642 |
110-115 |
NN |
denotes |
GATA1 |
T12643 |
116-119 |
NN |
denotes |
cre |
T12644 |
115-116 |
HYPH |
denotes |
- |
T12645 |
120-121 |
SYM |
denotes |
+ |
T12646 |
121-122 |
HYPH |
denotes |
/ |
T12647 |
122-123 |
SYM |
denotes |
+ |
T12648 |
124-134 |
JJ |
denotes |
transgenic |
T12649 |
140-142 |
, |
denotes |
, |
T12650 |
142-145 |
CC |
denotes |
and |
T12651 |
146-157 |
NNS |
denotes |
blastocysts |
T12652 |
163-170 |
VBN |
denotes |
flushed |
T12653 |
158-162 |
VBD |
denotes |
were |
T12654 |
171-175 |
IN |
denotes |
from |
T12655 |
176-183 |
JJ |
denotes |
uterine |
T12656 |
184-189 |
NNS |
denotes |
horns |
T12657 |
190-194 |
IN |
denotes |
with |
T12658 |
195-197 |
NN |
denotes |
M2 |
T12659 |
198-204 |
NN |
denotes |
medium |
T12660 |
205-206 |
-LRB- |
denotes |
( |
T12661 |
206-211 |
NNP |
denotes |
Sigma |
T12662 |
211-212 |
-RRB- |
denotes |
) |
T12663 |
213-215 |
IN |
denotes |
at |
T12664 |
216-219 |
CD |
denotes |
3.5 |
T12665 |
220-223 |
NNS |
denotes |
dpc |
T12666 |
223-224 |
. |
denotes |
. |
T12667 |
224-327 |
sentence |
denotes |
Individual blastocysts were cultured in multiwell tissue cultures plates as described previously [44]. |
T12668 |
225-235 |
JJ |
denotes |
Individual |
T12669 |
236-247 |
NNS |
denotes |
blastocysts |
T12670 |
253-261 |
VBN |
denotes |
cultured |
T12671 |
248-252 |
VBD |
denotes |
were |
T12672 |
262-264 |
IN |
denotes |
in |
T12673 |
265-274 |
JJ |
denotes |
multiwell |
T12674 |
282-290 |
NNS |
denotes |
cultures |
T12675 |
275-281 |
NN |
denotes |
tissue |
T12676 |
291-297 |
NNS |
denotes |
plates |
T12677 |
298-300 |
IN |
denotes |
as |
T12678 |
301-310 |
VBN |
denotes |
described |
T12679 |
311-321 |
RB |
denotes |
previously |
T12680 |
322-323 |
-LRB- |
denotes |
[ |
T12681 |
323-325 |
CD |
denotes |
44 |
T12682 |
325-326 |
-RRB- |
denotes |
] |
T12683 |
326-327 |
. |
denotes |
. |
T12684 |
327-410 |
sentence |
denotes |
Cultures were inspected and photographed daily and the extent of outgrowth scored. |
T12685 |
328-336 |
NNS |
denotes |
Cultures |
T12686 |
342-351 |
VBN |
denotes |
inspected |
T12687 |
337-341 |
VBD |
denotes |
were |
T12688 |
352-355 |
CC |
denotes |
and |
T12689 |
356-368 |
VBN |
denotes |
photographed |
T12690 |
369-374 |
RB |
denotes |
daily |
T12691 |
375-378 |
CC |
denotes |
and |
T12692 |
379-382 |
DT |
denotes |
the |
T12693 |
383-389 |
NN |
denotes |
extent |
T12694 |
403-409 |
VBN |
denotes |
scored |
T12695 |
390-392 |
IN |
denotes |
of |
T12696 |
393-402 |
NN |
denotes |
outgrowth |
T12697 |
409-410 |
. |
denotes |
. |
T12698 |
410-464 |
sentence |
denotes |
After 7 d, cultures were harvested and DNA extracted. |
T12699 |
411-416 |
IN |
denotes |
After |
T12700 |
436-445 |
VBN |
denotes |
harvested |
T12701 |
417-418 |
CD |
denotes |
7 |
T12702 |
419-420 |
NNS |
denotes |
d |
T12703 |
420-422 |
, |
denotes |
, |
T12704 |
422-430 |
NNS |
denotes |
cultures |
T12705 |
431-435 |
VBD |
denotes |
were |
T12706 |
446-449 |
CC |
denotes |
and |
T12707 |
450-453 |
NN |
denotes |
DNA |
T12708 |
454-463 |
VBN |
denotes |
extracted |
T12709 |
463-464 |
. |
denotes |
. |
T12710 |
464-557 |
sentence |
denotes |
The Atrx genotype and sex of each culture was determined by PCR as described in Protocol S1. |
T12711 |
465-468 |
DT |
denotes |
The |
T12712 |
474-482 |
NN |
denotes |
genotype |
T12713 |
469-473 |
NN |
denotes |
Atrx |
T12714 |
511-521 |
VBN |
denotes |
determined |
T12715 |
483-486 |
CC |
denotes |
and |
T12716 |
487-490 |
NN |
denotes |
sex |
T12717 |
491-493 |
IN |
denotes |
of |
T12718 |
494-498 |
DT |
denotes |
each |
T12719 |
499-506 |
NN |
denotes |
culture |
T12720 |
507-510 |
VBD |
denotes |
was |
T12721 |
522-524 |
IN |
denotes |
by |
T12722 |
525-528 |
NN |
denotes |
PCR |
T12723 |
529-531 |
IN |
denotes |
as |
T12724 |
532-541 |
VBN |
denotes |
described |
T12725 |
542-544 |
IN |
denotes |
in |
T12726 |
545-553 |
NN |
denotes |
Protocol |
T12727 |
554-556 |
NN |
denotes |
S1 |
T12728 |
556-557 |
. |
denotes |
. |
R7940 |
T12623 |
T12624 |
compound |
Blastocyst,outgrowth |
R7941 |
T12624 |
T12625 |
compound |
outgrowth,cultures |
R7942 |
T12626 |
T12625 |
punct |
.,cultures |
R7943 |
T12628 |
T12629 |
amod |
Superovulated,mice |
R7944 |
T12629 |
T12632 |
nsubjpass |
mice,mated |
R7945 |
T12630 |
T12629 |
amod |
heterozygous,mice |
R7946 |
T12631 |
T12629 |
amod |
female,mice |
R7947 |
T12633 |
T12634 |
punct |
(,flox |
R7948 |
T12634 |
T12629 |
parataxis |
flox,mice |
R7949 |
T12635 |
T12634 |
compound |
Atrx WT,flox |
R7950 |
T12636 |
T12634 |
punct |
/,flox |
R7951 |
T12637 |
T12634 |
punct |
),flox |
R7952 |
T12638 |
T12632 |
auxpass |
were,mated |
R7953 |
T12639 |
T12632 |
prep |
to,mated |
R7954 |
T12640 |
T12641 |
amod |
homozygous,males |
R7955 |
T12641 |
T12639 |
pobj |
males,to |
R7956 |
T12642 |
T12643 |
nmod |
GATA1,cre |
R7957 |
T12643 |
T12641 |
nmod |
cre,males |
R7958 |
T12644 |
T12643 |
punct |
-,cre |
R7959 |
T12645 |
T12643 |
punct |
+,cre |
R7960 |
T12646 |
T12643 |
punct |
/,cre |
R7961 |
T12647 |
T12643 |
punct |
+,cre |
R7962 |
T12648 |
T12641 |
amod |
transgenic,males |
R7963 |
T12649 |
T12632 |
punct |
", ",mated |
R7964 |
T12650 |
T12632 |
cc |
and,mated |
R7965 |
T12651 |
T12652 |
nsubjpass |
blastocysts,flushed |
R7966 |
T12652 |
T12632 |
conj |
flushed,mated |
R7967 |
T12653 |
T12652 |
auxpass |
were,flushed |
R7968 |
T12654 |
T12652 |
prep |
from,flushed |
R7969 |
T12655 |
T12656 |
amod |
uterine,horns |
R7970 |
T12656 |
T12654 |
pobj |
horns,from |
R7971 |
T12657 |
T12652 |
prep |
with,flushed |
R7972 |
T12658 |
T12659 |
compound |
M2,medium |
R7973 |
T12659 |
T12657 |
pobj |
medium,with |
R7974 |
T12660 |
T12661 |
punct |
(,Sigma |
R7975 |
T12661 |
T12659 |
parataxis |
Sigma,medium |
R7976 |
T12662 |
T12661 |
punct |
),Sigma |
R7977 |
T12663 |
T12652 |
prep |
at,flushed |
R7978 |
T12664 |
T12665 |
nummod |
3.5,dpc |
R7979 |
T12665 |
T12663 |
pobj |
dpc,at |
R7980 |
T12666 |
T12652 |
punct |
.,flushed |
R7981 |
T12668 |
T12669 |
amod |
Individual,blastocysts |
R7982 |
T12669 |
T12670 |
nsubjpass |
blastocysts,cultured |
R7983 |
T12671 |
T12670 |
auxpass |
were,cultured |
R7984 |
T12672 |
T12670 |
prep |
in,cultured |
R7985 |
T12673 |
T12674 |
amod |
multiwell,cultures |
R7986 |
T12674 |
T12676 |
compound |
cultures,plates |
R7987 |
T12675 |
T12674 |
compound |
tissue,cultures |
R7988 |
T12676 |
T12672 |
pobj |
plates,in |
R7989 |
T12677 |
T12678 |
mark |
as,described |
R7990 |
T12678 |
T12670 |
advcl |
described,cultured |
R7991 |
T12679 |
T12678 |
advmod |
previously,described |
R7992 |
T12680 |
T12681 |
punct |
[,44 |
R7993 |
T12681 |
T12670 |
parataxis |
44,cultured |
R7994 |
T12682 |
T12681 |
punct |
],44 |
R7995 |
T12683 |
T12670 |
punct |
.,cultured |
R7996 |
T12685 |
T12686 |
nsubj |
Cultures,inspected |
R7997 |
T12687 |
T12686 |
aux |
were,inspected |
R7998 |
T12688 |
T12686 |
cc |
and,inspected |
R7999 |
T12689 |
T12686 |
conj |
photographed,inspected |
R8000 |
T12690 |
T12686 |
advmod |
daily,inspected |
R8001 |
T12691 |
T12686 |
cc |
and,inspected |
R8002 |
T12692 |
T12693 |
det |
the,extent |
R8003 |
T12693 |
T12694 |
nsubj |
extent,scored |
R8004 |
T12694 |
T12686 |
conj |
scored,inspected |
R8005 |
T12695 |
T12693 |
prep |
of,extent |
R8006 |
T12696 |
T12695 |
pobj |
outgrowth,of |
R8007 |
T12697 |
T12694 |
punct |
.,scored |
R8008 |
T12699 |
T12700 |
prep |
After,harvested |
R8009 |
T12701 |
T12702 |
nummod |
7,d |
R8010 |
T12702 |
T12699 |
pobj |
d,After |
R8011 |
T12703 |
T12700 |
punct |
", ",harvested |
R8012 |
T12704 |
T12700 |
nsubjpass |
cultures,harvested |
R8013 |
T12705 |
T12700 |
auxpass |
were,harvested |
R8014 |
T12706 |
T12700 |
cc |
and,harvested |
R8015 |
T12707 |
T12708 |
nsubj |
DNA,extracted |
R8016 |
T12708 |
T12700 |
conj |
extracted,harvested |
R8017 |
T12709 |
T12700 |
punct |
.,harvested |
R8018 |
T12711 |
T12712 |
det |
The,genotype |
R8019 |
T12712 |
T12714 |
nsubjpass |
genotype,determined |
R8020 |
T12713 |
T12712 |
compound |
Atrx,genotype |
R8021 |
T12715 |
T12712 |
cc |
and,genotype |
R8022 |
T12716 |
T12712 |
conj |
sex,genotype |
R8023 |
T12717 |
T12712 |
prep |
of,genotype |
R8024 |
T12718 |
T12719 |
det |
each,culture |
R8025 |
T12719 |
T12717 |
pobj |
culture,of |
R8026 |
T12720 |
T12714 |
auxpass |
was,determined |
R8027 |
T12721 |
T12714 |
prep |
by,determined |
R8028 |
T12722 |
T12721 |
pobj |
PCR,by |
R8029 |
T12723 |
T12724 |
mark |
as,described |
R8030 |
T12724 |
T12714 |
advcl |
described,determined |
R8031 |
T12725 |
T12724 |
prep |
in,described |
R8032 |
T12726 |
T12727 |
compound |
Protocol,S1 |
R8033 |
T12727 |
T12725 |
pobj |
S1,in |
R8034 |
T12728 |
T12714 |
punct |
.,determined |