> top > docs > PMC:1440874 > spans > 54063-55561 > annotations

PMC:1440874 / 54063-55561 JSONTXT

Annnotations TAB JSON ListView MergeView

craft-sa-dev

Id Subject Object Predicate Lexical cue
T12303 0-3 CD denotes 7.5
T12304 4-7 NN denotes dpc
T12305 17-26 NNS denotes swellings
T12306 8-16 JJ denotes decidual
T12307 32-41 VBN denotes dissected
T12308 27-31 VBD denotes were
T12309 42-46 RB denotes away
T12310 47-51 IN denotes from
T12311 52-60 JJ denotes maternal
T12312 61-67 NN denotes tissue
T12313 68-71 CC denotes and
T12314 72-77 VBN denotes fixed
T12315 78-80 IN denotes in
T12316 81-82 CD denotes 4
T12317 82-83 NN denotes %
T12318 84-100 NN denotes paraformaldehyde
T12319 100-101 HYPH denotes /
T12320 101-104 NN denotes PBS
T12321 105-114 RB denotes overnight
T12322 115-117 IN denotes at
T12323 118-119 CD denotes 4
T12324 120-122 NN denotes °C
T12325 122-123 . denotes .
T12326 123-272 sentence denotes After embryos were washed thoroughly in PBS, they were dehydrated through an ethanol series and xylene, embedded in paraffin, and sectioned at 5 μm.
T12327 124-129 IN denotes After
T12328 143-149 VBN denotes washed
T12329 130-137 NNS denotes embryos
T12330 138-142 VBD denotes were
T12331 179-189 VBN denotes dehydrated
T12332 150-160 RB denotes thoroughly
T12333 161-163 IN denotes in
T12334 164-167 NN denotes PBS
T12335 167-169 , denotes ,
T12336 169-173 PRP denotes they
T12337 174-178 VBD denotes were
T12338 190-197 IN denotes through
T12339 198-200 DT denotes an
T12340 209-215 NNS denotes series
T12341 201-208 NN denotes ethanol
T12342 216-219 CC denotes and
T12343 220-226 NN denotes xylene
T12344 226-228 , denotes ,
T12345 228-236 VBN denotes embedded
T12346 237-239 IN denotes in
T12347 240-248 NN denotes paraffin
T12348 248-250 , denotes ,
T12349 250-253 CC denotes and
T12350 254-263 VBN denotes sectioned
T12351 264-266 IN denotes at
T12352 267-268 CD denotes 5
T12353 269-271 NNS denotes μm
T12354 271-272 . denotes .
T12355 272-463 sentence denotes Sections were processed for immunohistochemistry using the ABC Staining System (Santa Cruz Biotechnology, Santa Cruz, California, United States) according to the manufacturer's instructions.
T12356 273-281 NNS denotes Sections
T12357 287-296 VBN denotes processed
T12358 282-286 VBD denotes were
T12359 297-300 IN denotes for
T12360 301-321 NN denotes immunohistochemistry
T12361 322-327 VBG denotes using
T12362 328-331 DT denotes the
T12363 345-351 NNP denotes System
T12364 332-335 NNP denotes ABC
T12365 336-344 NNP denotes Staining
T12366 352-353 -LRB- denotes (
T12367 364-377 NNP denotes Biotechnology
T12368 353-358 NNP denotes Santa
T12369 359-363 NNP denotes Cruz
T12370 377-379 , denotes ,
T12371 379-384 NNP denotes Santa
T12372 385-389 NNP denotes Cruz
T12373 389-391 , denotes ,
T12374 391-401 NNP denotes California
T12375 401-403 , denotes ,
T12376 403-409 NNP denotes United
T12377 410-416 NNP denotes States
T12378 416-417 -RRB- denotes )
T12379 418-427 VBG denotes according
T12380 428-430 IN denotes to
T12381 431-434 DT denotes the
T12382 435-447 NN denotes manufacturer
T12383 450-462 NNS denotes instructions
T12384 447-449 POS denotes 's
T12385 462-463 . denotes .
T12386 463-761 sentence denotes Sections were stained with rabbit polyclonal antibodies against ATRX (H-300, Santa Cruz Biotechnology), Placental lactogen-I (AB1288, Chemicon International, Temecula, California, United States) and phospho (Ser10)-histone H3 (06–570, Upstate Biotechnology, Waltham, Massachusetts, United States).
T12387 464-472 NNS denotes Sections
T12388 478-485 VBN denotes stained
T12389 473-477 VBD denotes were
T12390 486-490 IN denotes with
T12391 491-497 NN denotes rabbit
T12392 509-519 NNS denotes antibodies
T12393 498-508 JJ denotes polyclonal
T12394 520-527 IN denotes against
T12395 528-532 NN denotes ATRX
T12396 533-534 -LRB- denotes (
T12397 534-535 NN denotes H
T12398 535-536 HYPH denotes -
T12399 536-539 CD denotes 300
T12400 539-541 , denotes ,
T12401 541-546 NNP denotes Santa
T12402 547-551 NNP denotes Cruz
T12403 552-565 NNP denotes Biotechnology
T12404 565-566 -RRB- denotes )
T12405 566-568 , denotes ,
T12406 568-577 JJ denotes Placental
T12407 587-588 NN denotes I
T12408 578-586 NN denotes lactogen
T12409 586-587 HYPH denotes -
T12410 589-590 -LRB- denotes (
T12411 590-596 NN denotes AB1288
T12412 596-598 , denotes ,
T12413 598-606 NNP denotes Chemicon
T12414 607-620 NNP denotes International
T12415 620-622 , denotes ,
T12416 622-630 NNP denotes Temecula
T12417 630-632 , denotes ,
T12418 632-642 NNP denotes California
T12419 642-644 , denotes ,
T12420 644-650 NNP denotes United
T12421 651-657 NNP denotes States
T12422 657-658 -RRB- denotes )
T12423 659-662 CC denotes and
T12424 663-670 NN denotes phospho
T12425 679-686 NN denotes histone
T12426 671-672 -LRB- denotes (
T12427 672-677 NN denotes Ser10
T12428 677-678 -RRB- denotes )
T12429 678-679 HYPH denotes -
T12430 687-689 NN denotes H3
T12431 690-691 -LRB- denotes (
T12432 694-697 CD denotes 570
T12433 691-693 CD denotes 06
T12434 693-694 HYPH denotes –
T12435 697-699 , denotes ,
T12436 699-706 NNP denotes Upstate
T12437 707-720 NNP denotes Biotechnology
T12438 720-722 , denotes ,
T12439 722-729 NNP denotes Waltham
T12440 729-731 , denotes ,
T12441 731-744 NNP denotes Massachusetts
T12442 744-746 , denotes ,
T12443 746-752 NNP denotes United
T12444 753-759 NNP denotes States
T12445 759-760 -RRB- denotes )
T12446 760-761 . denotes .
T12447 761-830 sentence denotes Where appropriate, adjacent sections were stained with haematoxylin.
T12448 762-767 WRB denotes Where
T12449 768-779 JJ denotes appropriate
T12450 804-811 VBN denotes stained
T12451 779-781 , denotes ,
T12452 781-789 JJ denotes adjacent
T12453 790-798 NNS denotes sections
T12454 799-803 VBD denotes were
T12455 812-816 IN denotes with
T12456 817-829 NN denotes haematoxylin
T12457 829-830 . denotes .
T12458 830-989 sentence denotes In some cases, adjacent sections were also analysed to detect apoptotic cells by TUNEL using the in situ cell death detection kit (Roche, Basel, Switzerland).
T12459 831-833 IN denotes In
T12460 874-882 VBN denotes analysed
T12461 834-838 DT denotes some
T12462 839-844 NNS denotes cases
T12463 844-846 , denotes ,
T12464 846-854 JJ denotes adjacent
T12465 855-863 NNS denotes sections
T12466 864-868 VBD denotes were
T12467 869-873 RB denotes also
T12468 883-885 TO denotes to
T12469 886-892 VB denotes detect
T12470 893-902 JJ denotes apoptotic
T12471 903-908 NNS denotes cells
T12472 909-911 IN denotes by
T12473 912-917 NN denotes TUNEL
T12474 918-923 VBG denotes using
T12475 924-927 DT denotes the
T12476 957-960 NN denotes kit
T12477 928-930 FW denotes in
T12478 931-935 FW denotes situ
T12479 936-940 NN denotes cell
T12480 941-946 NN denotes death
T12481 947-956 NN denotes detection
T12482 961-962 -LRB- denotes (
T12483 962-967 NNP denotes Roche
T12484 967-969 , denotes ,
T12485 969-974 NNP denotes Basel
T12486 974-976 , denotes ,
T12487 976-987 NNP denotes Switzerland
T12488 987-988 -RRB- denotes )
T12489 988-989 . denotes .
T12490 989-1167 sentence denotes After labelling, these slides were mounted in Vectashield containing DAPI (Vector Laboratories, Burlingame, California, United States) and visualised by fluorescence microscopy.
T12491 990-995 IN denotes After
T12492 1025-1032 VBN denotes mounted
T12493 996-1005 NN denotes labelling
T12494 1005-1007 , denotes ,
T12495 1007-1012 DT denotes these
T12496 1013-1019 NNS denotes slides
T12497 1020-1024 VBD denotes were
T12498 1033-1035 IN denotes in
T12499 1036-1047 NNP denotes Vectashield
T12500 1048-1058 VBG denotes containing
T12501 1059-1063 NN denotes DAPI
T12502 1064-1065 -LRB- denotes (
T12503 1072-1084 NNP denotes Laboratories
T12504 1065-1071 NNP denotes Vector
T12505 1084-1086 , denotes ,
T12506 1086-1096 NNP denotes Burlingame
T12507 1096-1098 , denotes ,
T12508 1098-1108 NNP denotes California
T12509 1108-1110 , denotes ,
T12510 1110-1116 NNP denotes United
T12511 1117-1123 NNP denotes States
T12512 1123-1124 -RRB- denotes )
T12513 1125-1128 CC denotes and
T12514 1129-1139 VBN denotes visualised
T12515 1140-1142 IN denotes by
T12516 1143-1155 NN denotes fluorescence
T12517 1156-1166 NN denotes microscopy
T12518 1166-1167 . denotes .
T12519 1167-1498 sentence denotes Whole-mount in situ hybridisations were performed on 8.5 dpc embryos (dissected away from maternal and extraembryonic tissues) using a brachyury (T) riboprobe [16] and on bisected decidual implantation sites from which embryos (8.5 dpc) had been removed using a placental lactogen-1 (Pl-1) riboprobe (see Protocol S1 for details).
T12520 1168-1173 JJ denotes Whole
T12521 1174-1179 NN denotes mount
T12522 1173-1174 HYPH denotes -
T12523 1188-1202 NNS denotes hybridisations
T12524 1180-1182 FW denotes in
T12525 1183-1187 FW denotes situ
T12526 1208-1217 VBN denotes performed
T12527 1203-1207 VBD denotes were
T12528 1218-1220 IN denotes on
T12529 1221-1224 CD denotes 8.5
T12530 1225-1228 NN denotes dpc
T12531 1229-1236 NNS denotes embryos
T12532 1237-1238 -LRB- denotes (
T12533 1238-1247 VBN denotes dissected
T12534 1248-1252 RB denotes away
T12535 1253-1257 IN denotes from
T12536 1258-1266 JJ denotes maternal
T12537 1286-1293 NNS denotes tissues
T12538 1267-1270 CC denotes and
T12539 1271-1285 JJ denotes extraembryonic
T12540 1293-1294 -RRB- denotes )
T12541 1295-1300 VBG denotes using
T12542 1301-1302 DT denotes a
T12543 1317-1326 NN denotes riboprobe
T12544 1303-1312 NN denotes brachyury
T12545 1313-1314 -LRB- denotes (
T12546 1314-1315 NN denotes T
T12547 1315-1316 -RRB- denotes )
T12548 1327-1328 -LRB- denotes [
T12549 1328-1330 CD denotes 16
T12550 1330-1331 -RRB- denotes ]
T12551 1332-1335 CC denotes and
T12552 1336-1338 IN denotes on
T12553 1339-1347 VBN denotes bisected
T12554 1370-1375 NNS denotes sites
T12555 1348-1356 JJ denotes decidual
T12556 1357-1369 NN denotes implantation
T12557 1376-1380 IN denotes from
T12558 1414-1421 VBN denotes removed
T12559 1381-1386 WDT denotes which
T12560 1387-1394 NNS denotes embryos
T12561 1395-1396 -LRB- denotes (
T12562 1400-1403 NN denotes dpc
T12563 1396-1399 CD denotes 8.5
T12564 1403-1404 -RRB- denotes )
T12565 1405-1408 VBD denotes had
T12566 1409-1413 VBN denotes been
T12567 1422-1427 VBG denotes using
T12568 1428-1429 DT denotes a
T12569 1458-1467 NN denotes riboprobe
T12570 1430-1439 JJ denotes placental
T12571 1440-1448 NN denotes lactogen
T12572 1448-1449 HYPH denotes -
T12573 1449-1450 CD denotes 1
T12574 1451-1452 -LRB- denotes (
T12575 1452-1454 NN denotes Pl
T12576 1454-1455 HYPH denotes -
T12577 1455-1456 CD denotes 1
T12578 1456-1457 -RRB- denotes )
T12579 1468-1469 -LRB- denotes (
T12580 1469-1472 VB denotes see
T12581 1473-1481 NN denotes Protocol
T12582 1482-1484 NN denotes S1
T12583 1485-1488 IN denotes for
T12584 1489-1496 NNS denotes details
T12585 1496-1497 -RRB- denotes )
T12586 1497-1498 . denotes .
R7671 T12303 T12304 nummod 7.5,dpc
R7672 T12304 T12305 nmod dpc,swellings
R7673 T12305 T12307 nsubjpass swellings,dissected
R7674 T12306 T12305 amod decidual,swellings
R7675 T12308 T12307 auxpass were,dissected
R7676 T12309 T12307 advmod away,dissected
R7677 T12310 T12309 prep from,away
R7678 T12311 T12312 amod maternal,tissue
R7679 T12312 T12310 pobj tissue,from
R7680 T12313 T12307 cc and,dissected
R7681 T12314 T12307 conj fixed,dissected
R7682 T12315 T12314 prep in,fixed
R7683 T12316 T12317 nummod 4,%
R7684 T12317 T12318 compound %,paraformaldehyde
R7685 T12318 T12315 pobj paraformaldehyde,in
R7686 T12319 T12318 punct /,paraformaldehyde
R7687 T12320 T12318 appos PBS,paraformaldehyde
R7688 T12321 T12314 advmod overnight,fixed
R7689 T12322 T12314 prep at,fixed
R7690 T12323 T12324 nummod 4,°C
R7691 T12324 T12322 pobj °C,at
R7692 T12325 T12307 punct .,dissected
R7693 T12327 T12328 mark After,washed
R7694 T12328 T12331 advcl washed,dehydrated
R7695 T12329 T12328 nsubjpass embryos,washed
R7696 T12330 T12328 auxpass were,washed
R7697 T12332 T12328 advmod thoroughly,washed
R7698 T12333 T12328 prep in,washed
R7699 T12334 T12333 pobj PBS,in
R7700 T12335 T12331 punct ", ",dehydrated
R7701 T12336 T12331 nsubjpass they,dehydrated
R7702 T12337 T12331 auxpass were,dehydrated
R7703 T12338 T12331 prep through,dehydrated
R7704 T12339 T12340 det an,series
R7705 T12340 T12338 pobj series,through
R7706 T12341 T12340 compound ethanol,series
R7707 T12342 T12340 cc and,series
R7708 T12343 T12340 conj xylene,series
R7709 T12344 T12331 punct ", ",dehydrated
R7710 T12345 T12331 conj embedded,dehydrated
R7711 T12346 T12345 prep in,embedded
R7712 T12347 T12346 pobj paraffin,in
R7713 T12348 T12345 punct ", ",embedded
R7714 T12349 T12345 cc and,embedded
R7715 T12350 T12345 conj sectioned,embedded
R7716 T12351 T12350 prep at,sectioned
R7717 T12352 T12353 nummod 5,μm
R7718 T12353 T12351 pobj μm,at
R7719 T12354 T12331 punct .,dehydrated
R7720 T12356 T12357 nsubjpass Sections,processed
R7721 T12358 T12357 auxpass were,processed
R7722 T12359 T12357 prep for,processed
R7723 T12360 T12359 pobj immunohistochemistry,for
R7724 T12361 T12357 advcl using,processed
R7725 T12362 T12363 det the,System
R7726 T12363 T12361 dobj System,using
R7727 T12364 T12363 compound ABC,System
R7728 T12365 T12363 compound Staining,System
R7729 T12366 T12367 punct (,Biotechnology
R7730 T12367 T12363 parataxis Biotechnology,System
R7731 T12368 T12369 compound Santa,Cruz
R7732 T12369 T12367 compound Cruz,Biotechnology
R7733 T12370 T12367 punct ", ",Biotechnology
R7734 T12371 T12372 compound Santa,Cruz
R7735 T12372 T12367 npadvmod Cruz,Biotechnology
R7736 T12373 T12367 punct ", ",Biotechnology
R7737 T12374 T12367 npadvmod California,Biotechnology
R7738 T12375 T12367 punct ", ",Biotechnology
R7739 T12376 T12377 compound United,States
R7740 T12377 T12367 npadvmod States,Biotechnology
R7741 T12378 T12367 punct ),Biotechnology
R7742 T12379 T12361 prep according,using
R7743 T12380 T12379 prep to,according
R7744 T12381 T12382 det the,manufacturer
R7745 T12382 T12383 poss manufacturer,instructions
R7746 T12383 T12380 pobj instructions,to
R7747 T12384 T12382 case 's,manufacturer
R7748 T12385 T12357 punct .,processed
R7749 T12387 T12388 nsubjpass Sections,stained
R7750 T12389 T12388 auxpass were,stained
R7751 T12390 T12388 prep with,stained
R7752 T12391 T12392 nmod rabbit,antibodies
R7753 T12392 T12390 pobj antibodies,with
R7754 T12393 T12392 amod polyclonal,antibodies
R7755 T12394 T12392 prep against,antibodies
R7756 T12395 T12394 pobj ATRX,against
R7757 T12396 T12397 punct (,H
R7758 T12397 T12395 parataxis H,ATRX
R7759 T12398 T12397 punct -,H
R7760 T12399 T12397 nummod 300,H
R7761 T12400 T12397 punct ", ",H
R7762 T12401 T12402 compound Santa,Cruz
R7763 T12402 T12403 compound Cruz,Biotechnology
R7764 T12403 T12397 npadvmod Biotechnology,H
R7765 T12404 T12397 punct ),H
R7766 T12405 T12395 punct ", ",ATRX
R7767 T12406 T12407 amod Placental,I
R7768 T12407 T12395 conj I,ATRX
R7769 T12408 T12407 compound lactogen,I
R7770 T12409 T12407 punct -,I
R7771 T12410 T12411 punct (,AB1288
R7772 T12411 T12407 parataxis AB1288,I
R7773 T12412 T12411 punct ", ",AB1288
R7774 T12413 T12414 compound Chemicon,International
R7775 T12414 T12411 npadvmod International,AB1288
R7776 T12415 T12411 punct ", ",AB1288
R7777 T12416 T12411 npadvmod Temecula,AB1288
R7778 T12417 T12411 punct ", ",AB1288
R7779 T12418 T12411 npadvmod California,AB1288
R7780 T12419 T12411 punct ", ",AB1288
R7781 T12420 T12421 compound United,States
R7782 T12421 T12411 npadvmod States,AB1288
R7783 T12422 T12411 punct ),AB1288
R7784 T12423 T12407 cc and,I
R7785 T12424 T12425 nmod phospho,histone
R7786 T12425 T12430 compound histone,H3
R7787 T12426 T12427 punct (,Ser10
R7788 T12427 T12425 parataxis Ser10,histone
R7789 T12428 T12427 punct ),Ser10
R7790 T12429 T12425 punct -,histone
R7791 T12430 T12407 conj H3,I
R7792 T12431 T12432 punct (,570
R7793 T12432 T12430 parataxis 570,H3
R7794 T12433 T12432 nummod 06,570
R7795 T12434 T12432 punct –,570
R7796 T12435 T12432 punct ", ",570
R7797 T12436 T12437 compound Upstate,Biotechnology
R7798 T12437 T12432 npadvmod Biotechnology,570
R7799 T12438 T12432 punct ", ",570
R7800 T12439 T12432 npadvmod Waltham,570
R7801 T12440 T12432 punct ", ",570
R7802 T12441 T12432 npadvmod Massachusetts,570
R7803 T12442 T12432 punct ", ",570
R7804 T12443 T12444 compound United,States
R7805 T12444 T12432 npadvmod States,570
R7806 T12445 T12432 punct ),570
R7807 T12446 T12388 punct .,stained
R7808 T12448 T12449 advmod Where,appropriate
R7809 T12449 T12450 advcl appropriate,stained
R7810 T12451 T12450 punct ", ",stained
R7811 T12452 T12453 amod adjacent,sections
R7812 T12453 T12450 nsubjpass sections,stained
R7813 T12454 T12450 auxpass were,stained
R7814 T12455 T12450 prep with,stained
R7815 T12456 T12455 pobj haematoxylin,with
R7816 T12457 T12450 punct .,stained
R7817 T12459 T12460 prep In,analysed
R7818 T12461 T12462 det some,cases
R7819 T12462 T12459 pobj cases,In
R7820 T12463 T12460 punct ", ",analysed
R7821 T12464 T12465 amod adjacent,sections
R7822 T12465 T12460 nsubjpass sections,analysed
R7823 T12466 T12460 auxpass were,analysed
R7824 T12467 T12460 advmod also,analysed
R7825 T12468 T12469 aux to,detect
R7826 T12469 T12460 advcl detect,analysed
R7827 T12470 T12471 amod apoptotic,cells
R7828 T12471 T12469 dobj cells,detect
R7829 T12472 T12469 prep by,detect
R7830 T12473 T12472 pobj TUNEL,by
R7831 T12474 T12469 advcl using,detect
R7832 T12475 T12476 det the,kit
R7833 T12476 T12474 dobj kit,using
R7834 T12477 T12478 advmod in,situ
R7835 T12478 T12476 amod situ,kit
R7836 T12479 T12480 compound cell,death
R7837 T12480 T12481 compound death,detection
R7838 T12481 T12476 compound detection,kit
R7839 T12482 T12483 punct (,Roche
R7840 T12483 T12474 parataxis Roche,using
R7841 T12484 T12483 punct ", ",Roche
R7842 T12485 T12483 npadvmod Basel,Roche
R7843 T12486 T12483 punct ", ",Roche
R7844 T12487 T12483 npadvmod Switzerland,Roche
R7845 T12488 T12483 punct ),Roche
R7846 T12489 T12460 punct .,analysed
R7847 T12491 T12492 prep After,mounted
R7848 T12493 T12491 pobj labelling,After
R7849 T12494 T12492 punct ", ",mounted
R7850 T12495 T12496 det these,slides
R7851 T12496 T12492 nsubjpass slides,mounted
R7852 T12497 T12492 auxpass were,mounted
R7853 T12498 T12492 prep in,mounted
R7854 T12499 T12498 pobj Vectashield,in
R7855 T12500 T12499 acl containing,Vectashield
R7856 T12501 T12500 dobj DAPI,containing
R7857 T12502 T12503 punct (,Laboratories
R7858 T12503 T12499 parataxis Laboratories,Vectashield
R7859 T12504 T12503 compound Vector,Laboratories
R7860 T12505 T12503 punct ", ",Laboratories
R7861 T12506 T12503 npadvmod Burlingame,Laboratories
R7862 T12507 T12503 punct ", ",Laboratories
R7863 T12508 T12503 npadvmod California,Laboratories
R7864 T12509 T12503 punct ", ",Laboratories
R7865 T12510 T12511 compound United,States
R7866 T12511 T12503 npadvmod States,Laboratories
R7867 T12512 T12503 punct ),Laboratories
R7868 T12513 T12492 cc and,mounted
R7869 T12514 T12492 conj visualised,mounted
R7870 T12515 T12514 prep by,visualised
R7871 T12516 T12517 compound fluorescence,microscopy
R7872 T12517 T12515 pobj microscopy,by
R7873 T12518 T12492 punct .,mounted
R7874 T12520 T12521 amod Whole,mount
R7875 T12521 T12523 nmod mount,hybridisations
R7876 T12522 T12521 punct -,mount
R7877 T12523 T12526 nsubjpass hybridisations,performed
R7878 T12524 T12525 advmod in,situ
R7879 T12525 T12523 amod situ,hybridisations
R7880 T12527 T12526 auxpass were,performed
R7881 T12528 T12526 prep on,performed
R7882 T12529 T12530 nummod 8.5,dpc
R7883 T12530 T12531 compound dpc,embryos
R7884 T12531 T12528 pobj embryos,on
R7885 T12532 T12531 punct (,embryos
R7886 T12533 T12531 acl dissected,embryos
R7887 T12534 T12533 advmod away,dissected
R7888 T12535 T12534 prep from,away
R7889 T12536 T12537 amod maternal,tissues
R7890 T12537 T12535 pobj tissues,from
R7891 T12538 T12536 cc and,maternal
R7892 T12539 T12536 conj extraembryonic,maternal
R7893 T12540 T12533 punct ),dissected
R7894 T12541 T12533 advcl using,dissected
R7895 T12542 T12543 det a,riboprobe
R7896 T12543 T12541 dobj riboprobe,using
R7897 T12544 T12543 nmod brachyury,riboprobe
R7898 T12545 T12544 punct (,brachyury
R7899 T12546 T12544 appos T,brachyury
R7900 T12547 T12543 punct ),riboprobe
R7901 T12548 T12549 punct [,16
R7902 T12549 T12541 parataxis 16,using
R7903 T12550 T12549 punct ],16
R7904 T12551 T12528 cc and,on
R7905 T12552 T12528 conj on,on
R7906 T12553 T12554 amod bisected,sites
R7907 T12554 T12552 pobj sites,on
R7908 T12555 T12554 amod decidual,sites
R7909 T12556 T12554 compound implantation,sites
R7910 T12557 T12558 prep from,removed
R7911 T12558 T12554 relcl removed,sites
R7912 T12559 T12557 pobj which,from
R7913 T12560 T12558 nsubjpass embryos,removed
R7914 T12561 T12562 punct (,dpc
R7915 T12562 T12560 parataxis dpc,embryos
R7916 T12563 T12562 nummod 8.5,dpc
R7917 T12564 T12562 punct ),dpc
R7918 T12565 T12558 aux had,removed
R7919 T12566 T12558 auxpass been,removed
R7920 T12567 T12558 advcl using,removed
R7921 T12568 T12569 det a,riboprobe
R7922 T12569 T12567 dobj riboprobe,using
R7923 T12570 T12571 amod placental,lactogen
R7924 T12571 T12569 nmod lactogen,riboprobe
R7925 T12572 T12571 punct -,lactogen
R7926 T12573 T12571 nummod 1,lactogen
R7927 T12574 T12571 punct (,lactogen
R7928 T12575 T12571 appos Pl,lactogen
R7929 T12576 T12575 punct -,Pl
R7930 T12577 T12575 nummod 1,Pl
R7931 T12578 T12569 punct ),riboprobe
R7932 T12579 T12580 punct (,see
R7933 T12580 T12558 parataxis see,removed
R7934 T12581 T12582 compound Protocol,S1
R7935 T12582 T12580 dobj S1,see
R7936 T12583 T12580 prep for,see
R7937 T12584 T12583 pobj details,for
R7938 T12585 T12580 punct ),see
R7939 T12586 T12526 punct .,performed

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12253 8-16 UBERON:0002450 denotes decidual
T12254 61-67 UBERON:0000479 denotes tissue
T12255 84-100 CHEBI_EXT:paraformaldehye denotes paraformaldehyde
T12256 130-137 UBERON:0000922 denotes embryos
T12257 201-208 CHEBI:16236 denotes ethanol
T12258 220-226 CHEBI:27338 denotes xylene
T12259 491-497 NCBITaxon:9986 denotes rabbit
T12260 509-519 GO:0042571 denotes antibodies
T12261 528-532 PR_EXT:000004503 denotes ATRX
T12262 568-577 UBERON:0001987 denotes Placental
T12263 568-586 CHEBI:81588 denotes Placental lactogen
T12264 568-588 PR_EXT:000013543 denotes Placental lactogen-I
T12265 663-670 CHEBI:32958 denotes phospho
T12266 679-686 CHEBI:15358 denotes histone
T12267 679-689 PR_EXT:000027594 denotes histone H3
T12268 817-829 CHEBI:51686 denotes haematoxylin
T12269 893-902 GO_PATO_EXT:apoptotic_process_or_quality denotes apoptotic
T12270 893-908 CL:0000445 denotes apoptotic cells
T12271 903-908 CL_GO_EXT:cell denotes cells
T12272 936-940 CL_GO_EXT:cell denotes cell
T12273 936-946 GO:0008219 denotes cell death
T12274 996-1005 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes labelling
T12275 1059-1063 CHEBI:51231 denotes DAPI
T12276 1065-1071 SO_EXT:0000440 denotes Vector
T12277 1188-1202 GO:0097617 denotes hybridisations
T12278 1229-1236 UBERON:0000922 denotes embryos
T12279 1271-1293 UBERON:0005292 denotes extraembryonic tissues
T12280 1303-1312 PR_EXT:000016001 denotes brachyury
T12281 1314-1315 PR_EXT:000016001 denotes T
T12282 1317-1326 CHEBI_SO_EXT:riboprobe denotes riboprobe
T12283 1348-1356 UBERON:0002450 denotes decidual
T12284 1357-1369 GO:0007566 denotes implantation
T12285 1387-1394 UBERON:0000922 denotes embryos
T12286 1430-1439 UBERON:0001987 denotes placental
T12287 1430-1448 CHEBI:81588 denotes placental lactogen
T12288 1430-1450 PR_EXT:000013543 denotes placental lactogen-1
T12289 1452-1454 CHEBI:81588 denotes Pl
T12290 1452-1456 PR_EXT:000013543 denotes Pl-1
T12291 1458-1467 CHEBI_SO_EXT:riboprobe denotes riboprobe

2_test

Id Subject Object Predicate Lexical cue
16628246-1689462-85799792 1328-1330 1689462 denotes 16
T74395 1328-1330 1689462 denotes 16

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12220 8-16 UBERON:0002450 denotes decidual
T12221 61-67 UBERON:0000479 denotes tissue
T12222 130-137 UBERON:0000922 denotes embryos
T12223 201-208 CHEBI:16236 denotes ethanol
T12224 220-226 CHEBI:27338 denotes xylene
T12225 491-497 NCBITaxon:9986 denotes rabbit
T12226 509-519 GO:0042571 denotes antibodies
T12227 528-532 PR:000004503 denotes ATRX
T12228 568-577 UBERON:0001987 denotes Placental
T12229 568-586 CHEBI:81588 denotes Placental lactogen
T12230 568-588 PR:000013543 denotes Placental lactogen-I
T12231 663-670 CHEBI:32958 denotes phospho
T12232 679-686 CHEBI:15358 denotes histone
T12233 679-689 PR:000027594 denotes histone H3
T12234 817-829 CHEBI:51686 denotes haematoxylin
T12235 893-908 CL:0000445 denotes apoptotic cells
T12236 936-946 GO:0008219 denotes cell death
T12237 1059-1063 CHEBI:51231 denotes DAPI
T12238 1065-1071 SO:0000440 denotes Vector
T12239 1188-1202 GO:0097617 denotes hybridisations
T12240 1229-1236 UBERON:0000922 denotes embryos
T12241 1271-1293 UBERON:0005292 denotes extraembryonic tissues
T12242 1303-1312 PR:000016001 denotes brachyury
T12243 1314-1315 PR:000016001 denotes T
T12244 1348-1356 UBERON:0002450 denotes decidual
T12245 1357-1369 GO:0007566 denotes implantation
T12246 1387-1394 UBERON:0000922 denotes embryos
T12247 1430-1439 UBERON:0001987 denotes placental
T12248 1430-1448 CHEBI:81588 denotes placental lactogen
T12249 1430-1450 PR:000013543 denotes placental lactogen-1
T12250 1452-1454 CHEBI:81588 denotes Pl
T12251 1452-1456 PR:000013543 denotes Pl-1