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PMC:1440874 / 53339-53999 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T12080 0-10 NN denotes Generation
T12081 11-13 IN denotes of
T12082 14-22 NNS denotes chimeras
T12083 22-24 , denotes ,
T12084 24-30 VBN denotes floxed
T12085 31-35 NNS denotes mice
T12086 35-37 , denotes ,
T12087 37-40 CC denotes and
T12088 41-47 NN denotes mutant
T12089 48-52 NNS denotes mice
T12090 52-53 . denotes .
T12091 53-205 sentence denotes Targeted Atrx flox ES cell clones were injected into C57BL/6 blastocysts and transferred into 2.5 dpc pseudopregnant recipients by standard techniques.
T12092 54-62 VBN denotes Targeted
T12093 81-87 NNS denotes clones
T12094 63-72 NN denotes Atrx flox
T12095 76-80 NN denotes cell
T12096 73-75 NN denotes ES
T12097 93-101 VBN denotes injected
T12098 88-92 VBD denotes were
T12099 102-106 IN denotes into
T12100 107-112 NN denotes C57BL
T12101 115-126 NNS denotes blastocysts
T12102 112-113 HYPH denotes /
T12103 113-114 CD denotes 6
T12104 127-130 CC denotes and
T12105 131-142 VBN denotes transferred
T12106 143-147 IN denotes into
T12107 148-151 CD denotes 2.5
T12108 152-155 NN denotes dpc
T12109 171-181 NNS denotes recipients
T12110 156-170 JJ denotes pseudopregnant
T12111 182-184 IN denotes by
T12112 185-193 JJ denotes standard
T12113 194-204 NNS denotes techniques
T12114 204-205 . denotes .
T12115 205-284 sentence denotes Resulting chimeras were mated with C57BL/6 to establish germline transmission.
T12116 206-215 VBG denotes Resulting
T12117 216-224 NNS denotes chimeras
T12118 230-235 VBN denotes mated
T12119 225-229 VBD denotes were
T12120 236-240 IN denotes with
T12121 241-246 NN denotes C57BL
T12122 246-247 HYPH denotes /
T12123 247-248 CD denotes 6
T12124 249-251 TO denotes to
T12125 252-261 VB denotes establish
T12126 262-270 NN denotes germline
T12127 271-283 NN denotes transmission
T12128 283-284 . denotes .
T12129 284-439 sentence denotes Offspring with the Atrx flox allele were identified by Southern blotting of SacI-digested tail DNA using the intron 17 probe as shown in Figure 2A and 2C.
T12130 285-294 NN denotes Offspring
T12131 326-336 VBN denotes identified
T12132 295-299 IN denotes with
T12133 300-303 DT denotes the
T12134 314-320 NN denotes allele
T12135 304-313 NN denotes Atrx flox
T12136 321-325 VBD denotes were
T12137 337-339 IN denotes by
T12138 340-348 NNP denotes Southern
T12139 349-357 NN denotes blotting
T12140 358-360 IN denotes of
T12141 361-365 NN denotes SacI
T12142 366-374 VBN denotes digested
T12143 365-366 HYPH denotes -
T12144 380-383 NN denotes DNA
T12145 375-379 NN denotes tail
T12146 384-389 VBG denotes using
T12147 390-393 DT denotes the
T12148 404-409 NN denotes probe
T12149 394-400 NN denotes intron
T12150 401-403 CD denotes 17
T12151 410-412 IN denotes as
T12152 413-418 VBN denotes shown
T12153 419-421 IN denotes in
T12154 422-428 NN denotes Figure
T12155 429-431 NN denotes 2A
T12156 432-435 CC denotes and
T12157 436-438 NN denotes 2C
T12158 438-439 . denotes .
T12159 439-547 sentence denotes For Cre-recombination, Atrx flox mice were crossed with GATA1-Cre transgenic mice as described in the text.
T12160 440-443 IN denotes For
T12161 483-490 VBN denotes crossed
T12162 444-447 NN denotes Cre
T12163 448-461 NN denotes recombination
T12164 447-448 HYPH denotes -
T12165 461-463 , denotes ,
T12166 463-472 NN denotes Atrx flox
T12167 473-477 NNS denotes mice
T12168 478-482 VBD denotes were
T12169 491-495 IN denotes with
T12170 496-501 NN denotes GATA1
T12171 502-505 NN denotes Cre
T12172 501-502 HYPH denotes -
T12173 506-516 JJ denotes transgenic
T12174 517-521 NNS denotes mice
T12175 522-524 IN denotes as
T12176 525-534 VBN denotes described
T12177 535-537 IN denotes in
T12178 538-541 DT denotes the
T12179 542-546 NN denotes text
T12180 546-547 . denotes .
T12181 547-660 sentence denotes Recombinant alleles were detected by Southern blotting as described above or by PCR as described in Protocol S1.
T12182 548-559 JJ denotes Recombinant
T12183 560-567 NNS denotes alleles
T12184 573-581 VBN denotes detected
T12185 568-572 VBD denotes were
T12186 582-584 IN denotes by
T12187 585-593 NNP denotes Southern
T12188 594-602 NN denotes blotting
T12189 603-605 IN denotes as
T12190 606-615 VBN denotes described
T12191 616-621 RB denotes above
T12192 622-624 CC denotes or
T12193 625-627 IN denotes by
T12194 628-631 NN denotes PCR
T12195 632-634 IN denotes as
T12196 635-644 VBN denotes described
T12197 645-647 IN denotes in
T12198 648-656 NN denotes Protocol
T12199 657-659 NN denotes S1
T12200 659-660 . denotes .
R7552 T12081 T12080 prep of,Generation
R7553 T12082 T12081 pobj chimeras,of
R7554 T12083 T12082 punct ", ",chimeras
R7555 T12084 T12085 amod floxed,mice
R7556 T12085 T12082 conj mice,chimeras
R7557 T12086 T12085 punct ", ",mice
R7558 T12087 T12085 cc and,mice
R7559 T12088 T12089 compound mutant,mice
R7560 T12089 T12085 conj mice,mice
R7561 T12090 T12080 punct .,Generation
R7562 T12092 T12093 amod Targeted,clones
R7563 T12093 T12097 nsubjpass clones,injected
R7564 T12094 T12095 compound Atrx flox,cell
R7565 T12095 T12093 compound cell,clones
R7566 T12096 T12095 compound ES,cell
R7567 T12098 T12097 auxpass were,injected
R7568 T12099 T12097 prep into,injected
R7569 T12100 T12101 nmod C57BL,blastocysts
R7570 T12101 T12099 pobj blastocysts,into
R7571 T12102 T12100 punct /,C57BL
R7572 T12103 T12100 nummod 6,C57BL
R7573 T12104 T12097 cc and,injected
R7574 T12105 T12097 conj transferred,injected
R7575 T12106 T12105 prep into,transferred
R7576 T12107 T12108 nummod 2.5,dpc
R7577 T12108 T12109 nmod dpc,recipients
R7578 T12109 T12106 pobj recipients,into
R7579 T12110 T12109 amod pseudopregnant,recipients
R7580 T12111 T12097 prep by,injected
R7581 T12112 T12113 amod standard,techniques
R7582 T12113 T12111 pobj techniques,by
R7583 T12114 T12097 punct .,injected
R7584 T12116 T12117 amod Resulting,chimeras
R7585 T12117 T12118 nsubjpass chimeras,mated
R7586 T12119 T12118 auxpass were,mated
R7587 T12120 T12118 prep with,mated
R7588 T12121 T12120 pobj C57BL,with
R7589 T12122 T12121 punct /,C57BL
R7590 T12123 T12121 nummod 6,C57BL
R7591 T12124 T12125 aux to,establish
R7592 T12125 T12118 advcl establish,mated
R7593 T12126 T12127 compound germline,transmission
R7594 T12127 T12125 dobj transmission,establish
R7595 T12128 T12118 punct .,mated
R7596 T12130 T12131 nsubjpass Offspring,identified
R7597 T12132 T12130 prep with,Offspring
R7598 T12133 T12134 det the,allele
R7599 T12134 T12132 pobj allele,with
R7600 T12135 T12134 compound Atrx flox,allele
R7601 T12136 T12131 auxpass were,identified
R7602 T12137 T12131 prep by,identified
R7603 T12138 T12139 compound Southern,blotting
R7604 T12139 T12137 pobj blotting,by
R7605 T12140 T12139 prep of,blotting
R7606 T12141 T12142 npadvmod SacI,digested
R7607 T12142 T12144 amod digested,DNA
R7608 T12143 T12142 punct -,digested
R7609 T12144 T12140 pobj DNA,of
R7610 T12145 T12144 compound tail,DNA
R7611 T12146 T12131 advcl using,identified
R7612 T12147 T12148 det the,probe
R7613 T12148 T12146 dobj probe,using
R7614 T12149 T12148 nmod intron,probe
R7615 T12150 T12149 nummod 17,intron
R7616 T12151 T12152 mark as,shown
R7617 T12152 T12146 advcl shown,using
R7618 T12153 T12152 prep in,shown
R7619 T12154 T12155 compound Figure,2A
R7620 T12155 T12153 pobj 2A,in
R7621 T12156 T12155 cc and,2A
R7622 T12157 T12155 conj 2C,2A
R7623 T12158 T12131 punct .,identified
R7624 T12160 T12161 prep For,crossed
R7625 T12162 T12163 compound Cre,recombination
R7626 T12163 T12160 pobj recombination,For
R7627 T12164 T12163 punct -,recombination
R7628 T12165 T12161 punct ", ",crossed
R7629 T12166 T12167 compound Atrx flox,mice
R7630 T12167 T12161 nsubjpass mice,crossed
R7631 T12168 T12161 auxpass were,crossed
R7632 T12169 T12161 prep with,crossed
R7633 T12170 T12171 compound GATA1,Cre
R7634 T12171 T12173 npadvmod Cre,transgenic
R7635 T12172 T12171 punct -,Cre
R7636 T12173 T12174 amod transgenic,mice
R7637 T12174 T12169 pobj mice,with
R7638 T12175 T12176 mark as,described
R7639 T12176 T12161 advcl described,crossed
R7640 T12177 T12176 prep in,described
R7641 T12178 T12179 det the,text
R7642 T12179 T12177 pobj text,in
R7643 T12180 T12161 punct .,crossed
R7644 T12182 T12183 amod Recombinant,alleles
R7645 T12183 T12184 nsubjpass alleles,detected
R7646 T12185 T12184 auxpass were,detected
R7647 T12186 T12184 prep by,detected
R7648 T12187 T12188 compound Southern,blotting
R7649 T12188 T12186 pobj blotting,by
R7650 T12189 T12190 mark as,described
R7651 T12190 T12188 advcl described,blotting
R7652 T12191 T12190 advmod above,described
R7653 T12192 T12186 cc or,by
R7654 T12193 T12186 conj by,by
R7655 T12194 T12193 pobj PCR,by
R7656 T12195 T12196 mark as,described
R7657 T12196 T12184 advcl described,detected
R7658 T12197 T12196 prep in,described
R7659 T12198 T12199 compound Protocol,S1
R7660 T12199 T12197 pobj S1,in
R7661 T12200 T12184 punct .,detected

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12052 24-30 SO:0000359 denotes floxed
T12053 31-35 NCBITaxon:10088 denotes mice
T12054 41-47 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T12055 48-52 NCBITaxon:10088 denotes mice
T12056 63-67 PR_EXT:000004503 denotes Atrx
T12057 68-72 SO:0000359 denotes flox
T12058 73-80 CL:0002322 denotes ES cell
T12059 76-80 CL_GO_EXT:cell denotes cell
T12060 81-87 SO_EXT:sequence_cloned_entity denotes clones
T12061 115-126 UBERON:0000358 denotes blastocysts
T12062 131-142 GO_EXT:biological_movement_or_translocation_process denotes transferred
T12063 230-235 GO:0007618 denotes mated
T12064 304-308 PR_EXT:000004503 denotes Atrx
T12065 309-313 SO:0000359 denotes flox
T12066 314-320 SO_EXT:0001023 denotes allele
T12067 375-379 UBERON:0002415 denotes tail
T12068 380-383 CHEBI_SO_EXT:DNA denotes DNA
T12069 394-400 SO_EXT:0000188 denotes intron
T12070 404-409 CHEBI_SO_EXT:molecular_probe denotes probe
T12071 448-461 GO_SO_EXT:sequence_rearrangement_process denotes recombination
T12072 463-467 PR_EXT:000004503 denotes Atrx
T12073 468-472 SO:0000359 denotes flox
T12074 473-477 NCBITaxon:10088 denotes mice
T12075 496-501 PR_EXT:000007857 denotes GATA1
T12076 506-516 SO_EXT:transgenic_entity denotes transgenic
T12077 517-521 NCBITaxon:10088 denotes mice
T12078 548-559 GO_SO_EXT:sequence_rearrangement_process denotes Recombinant
T12079 560-567 SO_EXT:0001023 denotes alleles

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12033 24-30 SO:0000359 denotes floxed
T12034 31-35 NCBITaxon:10088 denotes mice
T12035 48-52 NCBITaxon:10088 denotes mice
T12036 63-67 PR:000004503 denotes Atrx
T12037 68-72 SO:0000359 denotes flox
T12038 73-80 CL:0002322 denotes ES cell
T12039 115-126 UBERON:0000358 denotes blastocysts
T12040 230-235 GO:0007618 denotes mated
T12041 304-308 PR:000004503 denotes Atrx
T12042 309-313 SO:0000359 denotes flox
T12043 314-320 SO:0001023 denotes allele
T12044 375-379 UBERON:0002415 denotes tail
T12045 394-400 SO:0000188 denotes intron
T12046 463-467 PR:000004503 denotes Atrx
T12047 468-472 SO:0000359 denotes flox
T12048 473-477 NCBITaxon:10088 denotes mice
T12049 496-501 PR:000007857 denotes GATA1
T12050 517-521 NCBITaxon:10088 denotes mice
T12051 560-567 SO:0001023 denotes alleles