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Id Subject Object Predicate Lexical cue
T11569 0-3 NN denotes Cre
T11570 4-17 NN denotes recombination
T11571 3-4 HYPH denotes -
T11572 18-21 CC denotes and
T11573 22-38 NN denotes characterisation
T11574 39-41 IN denotes of
T11575 42-50 JJ denotes Atrxnull
T11576 54-59 NNS denotes cells
T11577 51-53 NN denotes ES
T11578 60-63 CC denotes and
T11579 64-72 JJ denotes embryoid
T11580 73-79 NNS denotes bodies
T11581 79-80 . denotes .
T11582 80-240 sentence denotes ES cell clones bearing the Atrx flox allele (1 × 107 cells) were transiently transfected with 50 μg of uncut Cre expression plasmid (pCAGGS-Cre-IRESpuro) [40].
T11583 81-83 NN denotes ES
T11584 84-88 NN denotes cell
T11585 89-95 NNS denotes clones
T11586 158-169 VBN denotes transfected
T11587 96-103 VBG denotes bearing
T11588 104-107 DT denotes the
T11589 118-124 NN denotes allele
T11590 108-117 NN denotes Atrx flox
T11591 125-126 -LRB- denotes (
T11592 134-139 NNS denotes cells
T11593 126-127 CD denotes 1
T11594 130-133 CD denotes 107
T11595 128-129 SYM denotes ×
T11596 139-140 -RRB- denotes )
T11597 141-145 VBD denotes were
T11598 146-157 RB denotes transiently
T11599 170-174 IN denotes with
T11600 175-177 CD denotes 50
T11601 178-180 NNS denotes μg
T11602 181-183 IN denotes of
T11603 184-189 JJ denotes uncut
T11604 205-212 NN denotes plasmid
T11605 190-193 NN denotes Cre
T11606 194-204 NN denotes expression
T11607 213-214 -LRB- denotes (
T11608 214-220 NN denotes pCAGGS
T11609 225-233 NN denotes IRESpuro
T11610 220-221 HYPH denotes -
T11611 221-224 NN denotes Cre
T11612 224-225 HYPH denotes -
T11613 233-234 -RRB- denotes )
T11614 235-236 -LRB- denotes [
T11615 236-238 CD denotes 40
T11616 238-239 -RRB- denotes ]
T11617 239-240 . denotes .
T11618 240-392 sentence denotes Following transfection, cells were plated at a range of clonal densities in complete medium without G418, and isolated subclones were picked after 7 d.
T11619 241-250 VBG denotes Following
T11620 276-282 VBN denotes plated
T11621 251-263 NN denotes transfection
T11622 263-265 , denotes ,
T11623 265-270 NNS denotes cells
T11624 271-275 VBD denotes were
T11625 283-285 IN denotes at
T11626 286-287 DT denotes a
T11627 288-293 NN denotes range
T11628 294-296 IN denotes of
T11629 297-303 JJ denotes clonal
T11630 304-313 NNS denotes densities
T11631 314-316 IN denotes in
T11632 317-325 JJ denotes complete
T11633 326-332 NN denotes medium
T11634 333-340 IN denotes without
T11635 341-345 NN denotes G418
T11636 345-347 , denotes ,
T11637 347-350 CC denotes and
T11638 351-359 VBN denotes isolated
T11639 360-369 NNS denotes subclones
T11640 375-381 VBN denotes picked
T11641 370-374 VBD denotes were
T11642 382-387 IN denotes after
T11643 388-389 CD denotes 7
T11644 390-391 NNS denotes d
T11645 391-392 . denotes .
T11646 392-637 sentence denotes Subclones were expanded and analysed for the presence of a recombinant locus initially by PCR, to detect deletion of the MC1neopA cassette, and then by Southern blot and hybridisation with the intron 17 probe described above (Figure 2A and 2C).
T11647 393-402 NNS denotes Subclones
T11648 408-416 VBN denotes expanded
T11649 403-407 VBD denotes were
T11650 417-420 CC denotes and
T11651 421-429 VBN denotes analysed
T11652 430-433 IN denotes for
T11653 434-437 DT denotes the
T11654 438-446 NN denotes presence
T11655 447-449 IN denotes of
T11656 450-451 DT denotes a
T11657 464-469 NN denotes locus
T11658 452-463 JJ denotes recombinant
T11659 470-479 RB denotes initially
T11660 480-482 IN denotes by
T11661 483-486 NN denotes PCR
T11662 486-488 , denotes ,
T11663 488-490 TO denotes to
T11664 491-497 VB denotes detect
T11665 498-506 NN denotes deletion
T11666 507-509 IN denotes of
T11667 510-513 DT denotes the
T11668 523-531 NN denotes cassette
T11669 514-522 NN denotes MC1neopA
T11670 531-533 , denotes ,
T11671 533-536 CC denotes and
T11672 537-541 RB denotes then
T11673 542-544 IN denotes by
T11674 545-553 NNP denotes Southern
T11675 554-558 NN denotes blot
T11676 559-562 CC denotes and
T11677 563-576 NN denotes hybridisation
T11678 577-581 IN denotes with
T11679 582-585 DT denotes the
T11680 596-601 NN denotes probe
T11681 586-592 NN denotes intron
T11682 593-595 CD denotes 17
T11683 602-611 VBN denotes described
T11684 612-617 RB denotes above
T11685 618-619 -LRB- denotes (
T11686 626-628 NN denotes 2A
T11687 619-625 NN denotes Figure
T11688 629-632 CC denotes and
T11689 633-635 NN denotes 2C
T11690 635-636 -RRB- denotes )
T11691 636-637 . denotes .
T11692 637-807 sentence denotes Northern blots were carried out according to standard techniques using 20 μg of total RNA isolated using TRI Reagent (Sigma-Aldrich, St. Louis, Missouri, United States).
T11693 638-646 NNP denotes Northern
T11694 647-652 NNS denotes blots
T11695 658-665 VBN denotes carried
T11696 653-657 VBD denotes were
T11697 666-669 RP denotes out
T11698 670-679 VBG denotes according
T11699 680-682 IN denotes to
T11700 683-691 JJ denotes standard
T11701 692-702 NNS denotes techniques
T11702 703-708 VBG denotes using
T11703 709-711 CD denotes 20
T11704 712-714 NNS denotes μg
T11705 715-717 IN denotes of
T11706 718-723 JJ denotes total
T11707 724-727 NN denotes RNA
T11708 728-736 VBN denotes isolated
T11709 737-742 VBG denotes using
T11710 743-746 NN denotes TRI
T11711 747-754 NN denotes Reagent
T11712 755-756 -LRB- denotes (
T11713 762-769 NNP denotes Aldrich
T11714 756-761 NNP denotes Sigma
T11715 761-762 HYPH denotes -
T11716 769-771 , denotes ,
T11717 771-774 NNP denotes St.
T11718 775-780 NNP denotes Louis
T11719 780-782 , denotes ,
T11720 782-790 NNP denotes Missouri
T11721 790-792 , denotes ,
T11722 792-798 NNP denotes United
T11723 799-805 NNP denotes States
T11724 805-806 -RRB- denotes )
T11725 806-807 . denotes .
T11726 807-935 sentence denotes The blot was hybridised with a probe from within exon 10 of the Atrx gene (generated with primers Mxnp4 and Mxnp28 [Table S1]).
T11727 808-811 DT denotes The
T11728 812-816 NN denotes blot
T11729 821-831 VBN denotes hybridised
T11730 817-820 VBD denotes was
T11731 832-836 IN denotes with
T11732 837-838 DT denotes a
T11733 839-844 NN denotes probe
T11734 845-849 IN denotes from
T11735 850-856 IN denotes within
T11736 857-861 NN denotes exon
T11737 862-864 CD denotes 10
T11738 865-867 IN denotes of
T11739 868-871 DT denotes the
T11740 877-881 NN denotes gene
T11741 872-876 NN denotes Atrx
T11742 882-883 -LRB- denotes (
T11743 883-892 VBN denotes generated
T11744 893-897 IN denotes with
T11745 898-905 NNS denotes primers
T11746 906-911 NN denotes Mxnp4
T11747 912-915 CC denotes and
T11748 916-922 NN denotes Mxnp28
T11749 923-924 -LRB- denotes [
T11750 930-932 NN denotes S1
T11751 924-929 NN denotes Table
T11752 932-933 -RRB- denotes ]
T11753 933-934 -RRB- denotes )
T11754 934-935 . denotes .
T11755 935-1062 sentence denotes After it was stripped, the membrane was hybridised with a β-actin cDNA probe (Clontech, Palo Alto, California, United States).
T11756 936-941 IN denotes After
T11757 949-957 VBN denotes stripped
T11758 942-944 PRP denotes it
T11759 945-948 VBD denotes was
T11760 976-986 VBN denotes hybridised
T11761 957-959 , denotes ,
T11762 959-962 DT denotes the
T11763 963-971 NN denotes membrane
T11764 972-975 VBD denotes was
T11765 987-991 IN denotes with
T11766 992-993 DT denotes a
T11767 1007-1012 NN denotes probe
T11768 994-995 NN denotes β
T11769 996-1001 NN denotes actin
T11770 995-996 HYPH denotes -
T11771 1002-1006 NN denotes cDNA
T11772 1013-1014 -LRB- denotes (
T11773 1014-1022 NNP denotes Clontech
T11774 1022-1024 , denotes ,
T11775 1024-1028 NNP denotes Palo
T11776 1029-1033 NNP denotes Alto
T11777 1033-1035 , denotes ,
T11778 1035-1045 NNP denotes California
T11779 1045-1047 , denotes ,
T11780 1047-1053 NNP denotes United
T11781 1054-1060 NNP denotes States
T11782 1060-1061 -RRB- denotes )
T11783 1061-1062 . denotes .
T11784 1062-1222 sentence denotes Protein extraction and detection of Atrx by Western blotting was performed as described previously [4], using the mouse monoclonal anti-ATRX antibody 23C [15].
T11785 1063-1070 NN denotes Protein
T11786 1071-1081 NN denotes extraction
T11787 1128-1137 VBN denotes performed
T11788 1082-1085 CC denotes and
T11789 1086-1095 NN denotes detection
T11790 1096-1098 IN denotes of
T11791 1099-1103 NN denotes Atrx
T11792 1104-1106 IN denotes by
T11793 1107-1114 NNP denotes Western
T11794 1115-1123 NN denotes blotting
T11795 1124-1127 VBD denotes was
T11796 1138-1140 IN denotes as
T11797 1141-1150 VBN denotes described
T11798 1151-1161 RB denotes previously
T11799 1162-1163 -LRB- denotes [
T11800 1163-1164 CD denotes 4
T11801 1164-1165 -RRB- denotes ]
T11802 1165-1167 , denotes ,
T11803 1167-1172 VBG denotes using
T11804 1173-1176 DT denotes the
T11805 1204-1212 NN denotes antibody
T11806 1177-1182 NN denotes mouse
T11807 1183-1193 JJ denotes monoclonal
T11808 1194-1203 JJ denotes anti-ATRX
T11809 1213-1216 NN denotes 23C
T11810 1217-1218 -LRB- denotes [
T11811 1218-1220 CD denotes 15
T11812 1220-1221 -RRB- denotes ]
T11813 1221-1222 . denotes .
T11814 1222-1289 sentence denotes Analyses of cell cycle and apoptosis are described in Protocol S1.
T11815 1223-1231 NNS denotes Analyses
T11816 1264-1273 VBN denotes described
T11817 1232-1234 IN denotes of
T11818 1235-1239 NN denotes cell
T11819 1240-1245 NN denotes cycle
T11820 1246-1249 CC denotes and
T11821 1250-1259 NN denotes apoptosis
T11822 1260-1263 VBP denotes are
T11823 1274-1276 IN denotes in
T11824 1277-1285 NN denotes Protocol
T11825 1286-1288 NN denotes S1
T11826 1288-1289 . denotes .
T11827 1289-1451 sentence denotes Methylation of rDNA was analysed in DNA from ES cell clones or from embryoid bodies recovered after 7 d of in vitro differentiation as described previously [41].
T11828 1290-1301 NN denotes Methylation
T11829 1314-1322 VBN denotes analysed
T11830 1302-1304 IN denotes of
T11831 1305-1309 NN denotes rDNA
T11832 1310-1313 VBD denotes was
T11833 1323-1325 IN denotes in
T11834 1326-1329 NN denotes DNA
T11835 1330-1334 IN denotes from
T11836 1335-1337 NN denotes ES
T11837 1338-1342 NN denotes cell
T11838 1343-1349 NNS denotes clones
T11839 1350-1352 CC denotes or
T11840 1353-1357 IN denotes from
T11841 1358-1366 JJ denotes embryoid
T11842 1367-1373 NNS denotes bodies
T11843 1374-1383 VBN denotes recovered
T11844 1384-1389 IN denotes after
T11845 1390-1391 CD denotes 7
T11846 1392-1393 NNS denotes d
T11847 1394-1396 IN denotes of
T11848 1397-1399 FW denotes in
T11849 1400-1405 FW denotes vitro
T11850 1406-1421 NN denotes differentiation
T11851 1422-1424 IN denotes as
T11852 1425-1434 VBN denotes described
T11853 1435-1445 RB denotes previously
T11854 1446-1447 -LRB- denotes [
T11855 1447-1449 CD denotes 41
T11856 1449-1450 -RRB- denotes ]
T11857 1450-1451 . denotes .
T11858 1451-1571 sentence denotes Genomic DNA was digested with methylation-sensitive restriction enzymes as described and analysed by Southern blotting.
T11859 1452-1459 JJ denotes Genomic
T11860 1460-1463 NN denotes DNA
T11861 1468-1476 VBN denotes digested
T11862 1464-1467 VBD denotes was
T11863 1477-1481 IN denotes with
T11864 1482-1493 NN denotes methylation
T11865 1494-1503 JJ denotes sensitive
T11866 1493-1494 HYPH denotes -
T11867 1516-1523 NNS denotes enzymes
T11868 1504-1515 NN denotes restriction
T11869 1524-1526 IN denotes as
T11870 1527-1536 VBN denotes described
T11871 1537-1540 CC denotes and
T11872 1541-1549 VBN denotes analysed
T11873 1550-1552 IN denotes by
T11874 1553-1561 NNP denotes Southern
T11875 1562-1570 NN denotes blotting
T11876 1570-1571 . denotes .
T11877 1571-1715 sentence denotes The RIB3 and RIB4 probes (which were amplified from human DNA, but cross-react with the mouse rDNA repeat) have been described previously [11].
T11878 1572-1575 DT denotes The
T11879 1590-1596 NNS denotes probes
T11880 1576-1580 NN denotes RIB3
T11881 1581-1584 CC denotes and
T11882 1585-1589 NN denotes RIB4
T11883 1689-1698 VBN denotes described
T11884 1597-1598 -LRB- denotes (
T11885 1598-1603 WDT denotes which
T11886 1609-1618 VBN denotes amplified
T11887 1604-1608 VBD denotes were
T11888 1619-1623 IN denotes from
T11889 1624-1629 JJ denotes human
T11890 1630-1633 NN denotes DNA
T11891 1633-1635 , denotes ,
T11892 1635-1638 CC denotes but
T11893 1639-1650 VBP denotes cross-react
T11894 1651-1655 IN denotes with
T11895 1656-1659 DT denotes the
T11896 1671-1677 NN denotes repeat
T11897 1660-1665 NN denotes mouse
T11898 1666-1670 NN denotes rDNA
T11899 1677-1678 -RRB- denotes )
T11900 1679-1683 VBP denotes have
T11901 1684-1688 VBN denotes been
T11902 1699-1709 RB denotes previously
T11903 1710-1711 -LRB- denotes [
T11904 1711-1713 CD denotes 11
T11905 1713-1714 -RRB- denotes ]
T11906 1714-1715 . denotes .
T11907 1715-1812 sentence denotes Oligonucleotide probes to detect Line 1 and Sine B1 repeats have been described previously [42].
T11908 1716-1731 NN denotes Oligonucleotide
T11909 1732-1738 NNS denotes probes
T11910 1786-1795 VBN denotes described
T11911 1739-1741 TO denotes to
T11912 1742-1748 VB denotes detect
T11913 1749-1753 NN denotes Line
T11914 1768-1775 NNS denotes repeats
T11915 1754-1755 CD denotes 1
T11916 1756-1759 CC denotes and
T11917 1760-1764 NN denotes Sine
T11918 1765-1767 NN denotes B1
T11919 1776-1780 VBP denotes have
T11920 1781-1785 VBN denotes been
T11921 1796-1806 RB denotes previously
T11922 1807-1808 -LRB- denotes [
T11923 1808-1810 CD denotes 42
T11924 1810-1811 -RRB- denotes ]
T11925 1811-1812 . denotes .
T11926 1812-1877 sentence denotes The minor satellite probe was a 27-mer oligonucleotide (mCENT2).
T11927 1813-1816 DT denotes The
T11928 1833-1838 NN denotes probe
T11929 1817-1822 JJ denotes minor
T11930 1823-1832 NN denotes satellite
T11931 1839-1842 VBD denotes was
T11932 1843-1844 DT denotes a
T11933 1852-1867 NN denotes oligonucleotide
T11934 1845-1847 CD denotes 27
T11935 1848-1851 NN denotes mer
T11936 1847-1848 HYPH denotes -
T11937 1868-1869 -LRB- denotes (
T11938 1869-1875 NN denotes mCENT2
T11939 1875-1876 -RRB- denotes )
T11940 1876-1877 . denotes .
T11941 1877-1940 sentence denotes The major satellite probe was a 27-mer oligonucleotide (DG27).
T11942 1878-1881 DT denotes The
T11943 1898-1903 NN denotes probe
T11944 1882-1887 JJ denotes major
T11945 1888-1897 NN denotes satellite
T11946 1904-1907 VBD denotes was
T11947 1908-1909 DT denotes a
T11948 1917-1932 NN denotes oligonucleotide
T11949 1910-1912 CD denotes 27
T11950 1913-1916 NN denotes mer
T11951 1912-1913 HYPH denotes -
T11952 1933-1934 -LRB- denotes (
T11953 1934-1938 NN denotes DG27
T11954 1938-1939 -RRB- denotes )
T11955 1939-1940 . denotes .
T11956 1940-2117 sentence denotes The IAP probe was an ~400 bp PCR product (primers 14A and 13K) amplified from an IAP inserted into the mouse agouti gene [43] and was a gift from Peter Warnecke and Tim Bestor.
T11957 1941-1944 DT denotes The
T11958 1949-1954 NN denotes probe
T11959 1945-1948 NN denotes IAP
T11960 1955-1958 VBD denotes was
T11961 1959-1961 DT denotes an
T11962 1974-1981 NN denotes product
T11963 1962-1963 SYM denotes ~
T11964 1963-1966 CD denotes 400
T11965 1967-1969 NN denotes bp
T11966 1970-1973 NN denotes PCR
T11967 1982-1983 -LRB- denotes (
T11968 1983-1990 NNS denotes primers
T11969 1991-1994 NN denotes 14A
T11970 1995-1998 CC denotes and
T11971 1999-2002 NN denotes 13K
T11972 2002-2003 -RRB- denotes )
T11973 2004-2013 VBN denotes amplified
T11974 2014-2018 IN denotes from
T11975 2019-2021 DT denotes an
T11976 2022-2025 NN denotes IAP
T11977 2026-2034 VBN denotes inserted
T11978 2035-2039 IN denotes into
T11979 2040-2043 DT denotes the
T11980 2057-2061 NN denotes gene
T11981 2044-2049 NN denotes mouse
T11982 2050-2056 NN denotes agouti
T11983 2062-2063 -LRB- denotes [
T11984 2063-2065 CD denotes 43
T11985 2065-2066 -RRB- denotes ]
T11986 2067-2070 CC denotes and
T11987 2071-2074 VBD denotes was
T11988 2075-2076 DT denotes a
T11989 2077-2081 NN denotes gift
T11990 2082-2086 IN denotes from
T11991 2087-2092 NNP denotes Peter
T11992 2093-2101 NNP denotes Warnecke
T11993 2102-2105 CC denotes and
T11994 2106-2109 NNP denotes Tim
T11995 2110-2116 NNP denotes Bestor
T11996 2116-2117 . denotes .
T11997 2117-2172 sentence denotes The PCR product included the entire 5′ LTR of the IAP.
T11998 2118-2121 DT denotes The
T11999 2126-2133 NN denotes product
T12000 2122-2125 NN denotes PCR
T12001 2134-2142 VBD denotes included
T12002 2143-2146 DT denotes the
T12003 2157-2160 NN denotes LTR
T12004 2147-2153 JJ denotes entire
T12005 2154-2155 CD denotes 5
T12006 2155-2156 SYM denotes ′
T12007 2161-2163 IN denotes of
T12008 2164-2167 DT denotes the
T12009 2168-2171 NN denotes IAP
T12010 2171-2172 . denotes .
T12011 2172-2225 sentence denotes All oligonucleotide sequences are shown in Table S1.
T12012 2173-2176 DT denotes All
T12013 2193-2202 NNS denotes sequences
T12014 2177-2192 NN denotes oligonucleotide
T12015 2207-2212 VBN denotes shown
T12016 2203-2206 VBP denotes are
T12017 2213-2215 IN denotes in
T12018 2216-2221 NN denotes Table
T12019 2222-2224 NN denotes S1
T12020 2224-2225 . denotes .
R7135 T11569 T11570 compound Cre,recombination
R7136 T11571 T11570 punct -,recombination
R7137 T11572 T11570 cc and,recombination
R7138 T11573 T11570 conj characterisation,recombination
R7139 T11574 T11570 prep of,recombination
R7140 T11575 T11576 amod Atrxnull,cells
R7141 T11576 T11574 pobj cells,of
R7142 T11577 T11576 compound ES,cells
R7143 T11578 T11576 cc and,cells
R7144 T11579 T11580 amod embryoid,bodies
R7145 T11580 T11576 conj bodies,cells
R7146 T11581 T11570 punct .,recombination
R7147 T11583 T11584 compound ES,cell
R7148 T11584 T11585 compound cell,clones
R7149 T11585 T11586 nsubjpass clones,transfected
R7150 T11587 T11585 acl bearing,clones
R7151 T11588 T11589 det the,allele
R7152 T11589 T11587 dobj allele,bearing
R7153 T11590 T11589 compound Atrx flox,allele
R7154 T11591 T11592 punct (,cells
R7155 T11592 T11585 parataxis cells,clones
R7156 T11593 T11594 quantmod 1,107
R7157 T11594 T11592 nummod 107,cells
R7158 T11595 T11594 punct ×,107
R7159 T11596 T11592 punct ),cells
R7160 T11597 T11586 auxpass were,transfected
R7161 T11598 T11586 advmod transiently,transfected
R7162 T11599 T11586 prep with,transfected
R7163 T11600 T11601 nummod 50,μg
R7164 T11601 T11599 pobj μg,with
R7165 T11602 T11601 prep of,μg
R7166 T11603 T11604 amod uncut,plasmid
R7167 T11604 T11602 pobj plasmid,of
R7168 T11605 T11606 compound Cre,expression
R7169 T11606 T11604 compound expression,plasmid
R7170 T11607 T11604 punct (,plasmid
R7171 T11608 T11609 compound pCAGGS,IRESpuro
R7172 T11609 T11604 appos IRESpuro,plasmid
R7173 T11610 T11609 punct -,IRESpuro
R7174 T11611 T11609 compound Cre,IRESpuro
R7175 T11612 T11609 punct -,IRESpuro
R7176 T11613 T11586 punct ),transfected
R7177 T11614 T11615 punct [,40
R7178 T11615 T11586 parataxis 40,transfected
R7179 T11616 T11615 punct ],40
R7180 T11617 T11586 punct .,transfected
R7181 T11619 T11620 prep Following,plated
R7182 T11621 T11619 pobj transfection,Following
R7183 T11622 T11620 punct ", ",plated
R7184 T11623 T11620 nsubjpass cells,plated
R7185 T11624 T11620 auxpass were,plated
R7186 T11625 T11620 prep at,plated
R7187 T11626 T11627 det a,range
R7188 T11627 T11625 pobj range,at
R7189 T11628 T11627 prep of,range
R7190 T11629 T11630 amod clonal,densities
R7191 T11630 T11628 pobj densities,of
R7192 T11631 T11620 prep in,plated
R7193 T11632 T11633 amod complete,medium
R7194 T11633 T11631 pobj medium,in
R7195 T11634 T11633 prep without,medium
R7196 T11635 T11634 pobj G418,without
R7197 T11636 T11620 punct ", ",plated
R7198 T11637 T11620 cc and,plated
R7199 T11638 T11639 amod isolated,subclones
R7200 T11639 T11640 nsubjpass subclones,picked
R7201 T11640 T11620 conj picked,plated
R7202 T11641 T11640 auxpass were,picked
R7203 T11642 T11640 prep after,picked
R7204 T11643 T11644 nummod 7,d
R7205 T11644 T11642 pobj d,after
R7206 T11645 T11620 punct .,plated
R7207 T11647 T11648 nsubjpass Subclones,expanded
R7208 T11649 T11648 auxpass were,expanded
R7209 T11650 T11648 cc and,expanded
R7210 T11651 T11648 conj analysed,expanded
R7211 T11652 T11651 prep for,analysed
R7212 T11653 T11654 det the,presence
R7213 T11654 T11652 pobj presence,for
R7214 T11655 T11654 prep of,presence
R7215 T11656 T11657 det a,locus
R7216 T11657 T11655 pobj locus,of
R7217 T11658 T11657 amod recombinant,locus
R7218 T11659 T11660 advmod initially,by
R7219 T11660 T11651 prep by,analysed
R7220 T11661 T11660 pobj PCR,by
R7221 T11662 T11660 punct ", ",by
R7222 T11663 T11664 aux to,detect
R7223 T11664 T11660 advcl detect,by
R7224 T11665 T11664 dobj deletion,detect
R7225 T11666 T11665 prep of,deletion
R7226 T11667 T11668 det the,cassette
R7227 T11668 T11666 pobj cassette,of
R7228 T11669 T11668 compound MC1neopA,cassette
R7229 T11670 T11660 punct ", ",by
R7230 T11671 T11660 cc and,by
R7231 T11672 T11673 advmod then,by
R7232 T11673 T11660 conj by,by
R7233 T11674 T11675 compound Southern,blot
R7234 T11675 T11673 pobj blot,by
R7235 T11676 T11675 cc and,blot
R7236 T11677 T11675 conj hybridisation,blot
R7237 T11678 T11675 prep with,blot
R7238 T11679 T11680 det the,probe
R7239 T11680 T11678 pobj probe,with
R7240 T11681 T11680 nmod intron,probe
R7241 T11682 T11681 nummod 17,intron
R7242 T11683 T11680 acl described,probe
R7243 T11684 T11683 advmod above,described
R7244 T11685 T11686 punct (,2A
R7245 T11686 T11651 parataxis 2A,analysed
R7246 T11687 T11686 compound Figure,2A
R7247 T11688 T11686 cc and,2A
R7248 T11689 T11686 conj 2C,2A
R7249 T11690 T11686 punct ),2A
R7250 T11691 T11648 punct .,expanded
R7251 T11693 T11694 compound Northern,blots
R7252 T11694 T11695 nsubjpass blots,carried
R7253 T11696 T11695 auxpass were,carried
R7254 T11697 T11695 prt out,carried
R7255 T11698 T11695 prep according,carried
R7256 T11699 T11698 prep to,according
R7257 T11700 T11701 amod standard,techniques
R7258 T11701 T11699 pobj techniques,to
R7259 T11702 T11695 advcl using,carried
R7260 T11703 T11704 nummod 20,μg
R7261 T11704 T11702 dobj μg,using
R7262 T11705 T11704 prep of,μg
R7263 T11706 T11707 amod total,RNA
R7264 T11707 T11705 pobj RNA,of
R7265 T11708 T11707 acl isolated,RNA
R7266 T11709 T11708 advcl using,isolated
R7267 T11710 T11711 compound TRI,Reagent
R7268 T11711 T11709 dobj Reagent,using
R7269 T11712 T11713 punct (,Aldrich
R7270 T11713 T11711 parataxis Aldrich,Reagent
R7271 T11714 T11713 compound Sigma,Aldrich
R7272 T11715 T11713 punct -,Aldrich
R7273 T11716 T11713 punct ", ",Aldrich
R7274 T11717 T11718 compound St.,Louis
R7275 T11718 T11713 npadvmod Louis,Aldrich
R7276 T11719 T11713 punct ", ",Aldrich
R7277 T11720 T11713 npadvmod Missouri,Aldrich
R7278 T11721 T11713 punct ", ",Aldrich
R7279 T11722 T11723 compound United,States
R7280 T11723 T11713 npadvmod States,Aldrich
R7281 T11724 T11713 punct ),Aldrich
R7282 T11725 T11695 punct .,carried
R7283 T11727 T11728 det The,blot
R7284 T11728 T11729 nsubjpass blot,hybridised
R7285 T11730 T11729 auxpass was,hybridised
R7286 T11731 T11729 prep with,hybridised
R7287 T11732 T11733 det a,probe
R7288 T11733 T11731 pobj probe,with
R7289 T11734 T11733 prep from,probe
R7290 T11735 T11734 prep within,from
R7291 T11736 T11735 pobj exon,within
R7292 T11737 T11736 nummod 10,exon
R7293 T11738 T11736 prep of,exon
R7294 T11739 T11740 det the,gene
R7295 T11740 T11738 pobj gene,of
R7296 T11741 T11740 compound Atrx,gene
R7297 T11742 T11733 punct (,probe
R7298 T11743 T11733 acl generated,probe
R7299 T11744 T11743 prep with,generated
R7300 T11745 T11746 compound primers,Mxnp4
R7301 T11746 T11744 pobj Mxnp4,with
R7302 T11747 T11746 cc and,Mxnp4
R7303 T11748 T11746 conj Mxnp28,Mxnp4
R7304 T11749 T11750 punct [,S1
R7305 T11750 T11729 parataxis S1,hybridised
R7306 T11751 T11750 compound Table,S1
R7307 T11752 T11750 punct ],S1
R7308 T11753 T11729 punct ),hybridised
R7309 T11754 T11729 punct .,hybridised
R7310 T11756 T11757 mark After,stripped
R7311 T11757 T11760 advcl stripped,hybridised
R7312 T11758 T11757 nsubjpass it,stripped
R7313 T11759 T11757 auxpass was,stripped
R7314 T11761 T11760 punct ", ",hybridised
R7315 T11762 T11763 det the,membrane
R7316 T11763 T11760 nsubjpass membrane,hybridised
R7317 T11764 T11760 auxpass was,hybridised
R7318 T11765 T11760 prep with,hybridised
R7319 T11766 T11767 det a,probe
R7320 T11767 T11765 pobj probe,with
R7321 T11768 T11769 compound β,actin
R7322 T11769 T11767 compound actin,probe
R7323 T11770 T11769 punct -,actin
R7324 T11771 T11767 compound cDNA,probe
R7325 T11772 T11773 punct (,Clontech
R7326 T11773 T11767 parataxis Clontech,probe
R7327 T11774 T11773 punct ", ",Clontech
R7328 T11775 T11776 compound Palo,Alto
R7329 T11776 T11773 npadvmod Alto,Clontech
R7330 T11777 T11773 punct ", ",Clontech
R7331 T11778 T11773 npadvmod California,Clontech
R7332 T11779 T11773 punct ", ",Clontech
R7333 T11780 T11781 compound United,States
R7334 T11781 T11773 npadvmod States,Clontech
R7335 T11782 T11773 punct ),Clontech
R7336 T11783 T11760 punct .,hybridised
R7337 T11785 T11786 compound Protein,extraction
R7338 T11786 T11787 nsubjpass extraction,performed
R7339 T11788 T11786 cc and,extraction
R7340 T11789 T11786 conj detection,extraction
R7341 T11790 T11789 prep of,detection
R7342 T11791 T11790 pobj Atrx,of
R7343 T11792 T11789 prep by,detection
R7344 T11793 T11794 compound Western,blotting
R7345 T11794 T11792 pobj blotting,by
R7346 T11795 T11787 auxpass was,performed
R7347 T11796 T11797 mark as,described
R7348 T11797 T11787 advcl described,performed
R7349 T11798 T11797 advmod previously,described
R7350 T11799 T11800 punct [,4
R7351 T11800 T11797 parataxis 4,described
R7352 T11801 T11800 punct ],4
R7353 T11802 T11787 punct ", ",performed
R7354 T11803 T11787 advcl using,performed
R7355 T11804 T11805 det the,antibody
R7356 T11805 T11803 dobj antibody,using
R7357 T11806 T11805 nmod mouse,antibody
R7358 T11807 T11805 amod monoclonal,antibody
R7359 T11808 T11805 amod anti-ATRX,antibody
R7360 T11809 T11805 appos 23C,antibody
R7361 T11810 T11811 punct [,15
R7362 T11811 T11787 parataxis 15,performed
R7363 T11812 T11811 punct ],15
R7364 T11813 T11787 punct .,performed
R7365 T11815 T11816 nsubjpass Analyses,described
R7366 T11817 T11815 prep of,Analyses
R7367 T11818 T11819 compound cell,cycle
R7368 T11819 T11817 pobj cycle,of
R7369 T11820 T11819 cc and,cycle
R7370 T11821 T11819 conj apoptosis,cycle
R7371 T11822 T11816 auxpass are,described
R7372 T11823 T11816 prep in,described
R7373 T11824 T11825 compound Protocol,S1
R7374 T11825 T11823 pobj S1,in
R7375 T11826 T11816 punct .,described
R7376 T11828 T11829 nsubjpass Methylation,analysed
R7377 T11830 T11828 prep of,Methylation
R7378 T11831 T11830 pobj rDNA,of
R7379 T11832 T11829 auxpass was,analysed
R7380 T11833 T11829 prep in,analysed
R7381 T11834 T11833 pobj DNA,in
R7382 T11835 T11834 prep from,DNA
R7383 T11836 T11837 compound ES,cell
R7384 T11837 T11838 compound cell,clones
R7385 T11838 T11835 pobj clones,from
R7386 T11839 T11835 cc or,from
R7387 T11840 T11835 conj from,from
R7388 T11841 T11842 amod embryoid,bodies
R7389 T11842 T11840 pobj bodies,from
R7390 T11843 T11842 acl recovered,bodies
R7391 T11844 T11843 prep after,recovered
R7392 T11845 T11846 nummod 7,d
R7393 T11846 T11844 pobj d,after
R7394 T11847 T11846 prep of,d
R7395 T11848 T11849 advmod in,vitro
R7396 T11849 T11850 amod vitro,differentiation
R7397 T11850 T11847 pobj differentiation,of
R7398 T11851 T11852 mark as,described
R7399 T11852 T11829 advcl described,analysed
R7400 T11853 T11852 advmod previously,described
R7401 T11854 T11855 punct [,41
R7402 T11855 T11829 parataxis 41,analysed
R7403 T11856 T11855 punct ],41
R7404 T11857 T11829 punct .,analysed
R7405 T11859 T11860 amod Genomic,DNA
R7406 T11860 T11861 nsubjpass DNA,digested
R7407 T11862 T11861 auxpass was,digested
R7408 T11863 T11861 prep with,digested
R7409 T11864 T11865 npadvmod methylation,sensitive
R7410 T11865 T11867 amod sensitive,enzymes
R7411 T11866 T11865 punct -,sensitive
R7412 T11867 T11863 pobj enzymes,with
R7413 T11868 T11867 compound restriction,enzymes
R7414 T11869 T11870 mark as,described
R7415 T11870 T11861 advcl described,digested
R7416 T11871 T11861 cc and,digested
R7417 T11872 T11861 conj analysed,digested
R7418 T11873 T11872 prep by,analysed
R7419 T11874 T11875 compound Southern,blotting
R7420 T11875 T11873 pobj blotting,by
R7421 T11876 T11861 punct .,digested
R7422 T11878 T11879 det The,probes
R7423 T11879 T11883 nsubjpass probes,described
R7424 T11880 T11879 nmod RIB3,probes
R7425 T11881 T11880 cc and,RIB3
R7426 T11882 T11880 conj RIB4,RIB3
R7427 T11884 T11879 punct (,probes
R7428 T11885 T11886 dep which,amplified
R7429 T11886 T11879 relcl amplified,probes
R7430 T11887 T11886 auxpass were,amplified
R7431 T11888 T11886 prep from,amplified
R7432 T11889 T11890 amod human,DNA
R7433 T11890 T11888 pobj DNA,from
R7434 T11891 T11886 punct ", ",amplified
R7435 T11892 T11886 cc but,amplified
R7436 T11893 T11886 conj cross-react,amplified
R7437 T11894 T11893 prep with,cross-react
R7438 T11895 T11896 det the,repeat
R7439 T11896 T11894 pobj repeat,with
R7440 T11897 T11898 compound mouse,rDNA
R7441 T11898 T11896 compound rDNA,repeat
R7442 T11899 T11879 punct ),probes
R7443 T11900 T11883 aux have,described
R7444 T11901 T11883 auxpass been,described
R7445 T11902 T11883 advmod previously,described
R7446 T11903 T11904 punct [,11
R7447 T11904 T11883 parataxis 11,described
R7448 T11905 T11904 punct ],11
R7449 T11906 T11883 punct .,described
R7450 T11908 T11909 compound Oligonucleotide,probes
R7451 T11909 T11910 nsubjpass probes,described
R7452 T11911 T11912 aux to,detect
R7453 T11912 T11909 advcl detect,probes
R7454 T11913 T11914 nmod Line,repeats
R7455 T11914 T11912 dobj repeats,detect
R7456 T11915 T11913 nummod 1,Line
R7457 T11916 T11913 cc and,Line
R7458 T11917 T11918 compound Sine,B1
R7459 T11918 T11913 conj B1,Line
R7460 T11919 T11910 aux have,described
R7461 T11920 T11910 auxpass been,described
R7462 T11921 T11910 advmod previously,described
R7463 T11922 T11923 punct [,42
R7464 T11923 T11910 parataxis 42,described
R7465 T11924 T11923 punct ],42
R7466 T11925 T11910 punct .,described
R7467 T11927 T11928 det The,probe
R7468 T11928 T11931 nsubj probe,was
R7469 T11929 T11930 amod minor,satellite
R7470 T11930 T11928 compound satellite,probe
R7471 T11932 T11933 det a,oligonucleotide
R7472 T11933 T11931 attr oligonucleotide,was
R7473 T11934 T11935 nummod 27,mer
R7474 T11935 T11933 compound mer,oligonucleotide
R7475 T11936 T11935 punct -,mer
R7476 T11937 T11933 punct (,oligonucleotide
R7477 T11938 T11933 appos mCENT2,oligonucleotide
R7478 T11939 T11931 punct ),was
R7479 T11940 T11931 punct .,was
R7480 T11942 T11943 det The,probe
R7481 T11943 T11946 nsubj probe,was
R7482 T11944 T11945 amod major,satellite
R7483 T11945 T11943 compound satellite,probe
R7484 T11947 T11948 det a,oligonucleotide
R7485 T11948 T11946 attr oligonucleotide,was
R7486 T11949 T11950 nummod 27,mer
R7487 T11950 T11948 compound mer,oligonucleotide
R7488 T11951 T11950 punct -,mer
R7489 T11952 T11948 punct (,oligonucleotide
R7490 T11953 T11948 appos DG27,oligonucleotide
R7491 T11954 T11946 punct ),was
R7492 T11955 T11946 punct .,was
R7493 T11957 T11958 det The,probe
R7494 T11958 T11960 nsubj probe,was
R7495 T11959 T11958 compound IAP,probe
R7496 T11961 T11962 det an,product
R7497 T11962 T11960 attr product,was
R7498 T11963 T11964 punct ~,400
R7499 T11964 T11965 nummod 400,bp
R7500 T11965 T11966 compound bp,PCR
R7501 T11966 T11962 compound PCR,product
R7502 T11967 T11962 punct (,product
R7503 T11968 T11969 compound primers,14A
R7504 T11969 T11962 appos 14A,product
R7505 T11970 T11969 cc and,14A
R7506 T11971 T11969 conj 13K,14A
R7507 T11972 T11962 punct ),product
R7508 T11973 T11962 acl amplified,product
R7509 T11974 T11973 prep from,amplified
R7510 T11975 T11976 det an,IAP
R7511 T11976 T11974 pobj IAP,from
R7512 T11977 T11976 acl inserted,IAP
R7513 T11978 T11977 prep into,inserted
R7514 T11979 T11980 det the,gene
R7515 T11980 T11978 pobj gene,into
R7516 T11981 T11982 compound mouse,agouti
R7517 T11982 T11980 compound agouti,gene
R7518 T11983 T11984 punct [,43
R7519 T11984 T11960 parataxis 43,was
R7520 T11985 T11984 punct ],43
R7521 T11986 T11960 cc and,was
R7522 T11987 T11960 conj was,was
R7523 T11988 T11989 det a,gift
R7524 T11989 T11987 attr gift,was
R7525 T11990 T11989 prep from,gift
R7526 T11991 T11992 compound Peter,Warnecke
R7527 T11992 T11990 pobj Warnecke,from
R7528 T11993 T11992 cc and,Warnecke
R7529 T11994 T11995 compound Tim,Bestor
R7530 T11995 T11992 conj Bestor,Warnecke
R7531 T11996 T11960 punct .,was
R7532 T11998 T11999 det The,product
R7533 T11999 T12001 nsubj product,included
R7534 T12000 T11999 compound PCR,product
R7535 T12002 T12003 det the,LTR
R7536 T12003 T12001 dobj LTR,included
R7537 T12004 T12003 amod entire,LTR
R7538 T12005 T12003 nummod 5,LTR
R7539 T12006 T12005 punct ′,5
R7540 T12007 T12003 prep of,LTR
R7541 T12008 T12009 det the,IAP
R7542 T12009 T12007 pobj IAP,of
R7543 T12010 T12001 punct .,included
R7544 T12012 T12013 det All,sequences
R7545 T12013 T12015 nsubjpass sequences,shown
R7546 T12014 T12013 compound oligonucleotide,sequences
R7547 T12016 T12015 auxpass are,shown
R7548 T12017 T12015 prep in,shown
R7549 T12018 T12019 compound Table,S1
R7550 T12019 T12017 pobj S1,in
R7551 T12020 T12015 punct .,shown

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11483 4-17 GO_SO_EXT:sequence_rearrangement_process denotes recombination
T11484 42-46 PR_EXT:000004503 denotes Atrx
T11485 46-50 SO_EXT:sequence_nullness denotes null
T11486 51-59 CL:0002322 denotes ES cells
T11487 54-59 CL_GO_EXT:cell denotes cells
T11488 64-79 UBERON:0014374 denotes embryoid bodies
T11489 81-88 CL:0002322 denotes ES cell
T11490 84-88 CL_GO_EXT:cell denotes cell
T11491 89-95 SO_EXT:sequence_cloned_entity denotes clones
T11492 108-112 PR_EXT:000004503 denotes Atrx
T11493 113-117 SO:0000359 denotes flox
T11494 118-124 SO_EXT:0001023 denotes allele
T11495 134-139 CL_GO_EXT:cell denotes cells
T11496 158-169 GO:0009294 denotes transfected
T11497 186-189 MOP:0000780 denotes cut
T11498 194-204 GO:0010467 denotes expression
T11499 205-212 SO_EXT:0000155 denotes plasmid
T11500 225-229 SO_EXT:0000243 denotes IRES
T11501 251-263 GO:0009294 denotes transfection
T11502 265-270 CL_GO_EXT:cell denotes cells
T11503 297-303 SO_EXT:sequence_cloned_entity denotes clonal
T11504 341-345 CHEBI:42768 denotes G418
T11505 452-463 GO_SO_EXT:sequence_rearrangement_process denotes recombinant
T11506 498-506 SO_EXT:sequence_deletion_entity_or_process denotes deletion
T11507 523-531 SO_EXT:0005853 denotes cassette
T11508 563-576 GO:0097617 denotes hybridisation
T11509 586-592 SO_EXT:0000188 denotes intron
T11510 596-601 CHEBI_SO_EXT:molecular_probe denotes probe
T11511 724-727 CHEBI_SO_EXT:RNA denotes RNA
T11512 747-754 CHEBI_EXT:33893 denotes Reagent
T11513 821-831 GO:0097617 denotes hybridised
T11514 839-844 CHEBI_SO_EXT:molecular_probe denotes probe
T11515 857-861 SO_EXT:0000147 denotes exon
T11516 872-876 PR_EXT:000004503 denotes Atrx
T11517 877-881 SO_EXT:0000704 denotes gene
T11518 898-905 SO_EXT:0000112 denotes primers
T11519 976-986 GO:0097617 denotes hybridised
T11520 994-1001 PR_EXT:000003676 denotes β-actin
T11521 1002-1006 SO_EXT:cDNA denotes cDNA
T11522 1007-1012 CHEBI_SO_EXT:molecular_probe denotes probe
T11523 1063-1070 CHEBI_PR_EXT:protein denotes Protein
T11524 1099-1103 PR_EXT:000004503 denotes Atrx
T11525 1177-1182 NCBITaxon:10088 denotes mouse
T11526 1199-1203 PR_EXT:000004503 denotes ATRX
T11527 1204-1212 GO:0042571 denotes antibody
T11528 1235-1239 CL_GO_EXT:cell denotes cell
T11529 1235-1245 GO:0007049 denotes cell cycle
T11530 1250-1259 GO:0006915 denotes apoptosis
T11531 1290-1301 GO_MOP_EXT:methylation denotes Methylation
T11532 1326-1329 CHEBI_SO_EXT:DNA denotes DNA
T11533 1335-1342 CL:0002322 denotes ES cell
T11534 1338-1342 CL_GO_EXT:cell denotes cell
T11535 1343-1349 SO_EXT:sequence_cloned_entity denotes clones
T11536 1358-1373 UBERON:0014374 denotes embryoid bodies
T11537 1406-1421 GO_RO_EXT:developmental_differentiation_process denotes differentiation
T11538 1452-1463 SO_EXT:genomic_DNA denotes Genomic DNA
T11539 1460-1463 CHEBI_SO_EXT:DNA denotes DNA
T11540 1482-1493 GO_MOP_EXT:methylation denotes methylation
T11541 1504-1523 GO_EXT:0015666 denotes restriction enzymes
T11542 1516-1523 CHEBI_GO_SO_EXT:enzyme denotes enzymes
T11543 1590-1596 CHEBI_SO_EXT:molecular_probe denotes probes
T11544 1624-1629 NCBITaxon:9606 denotes human
T11545 1630-1633 CHEBI_SO_EXT:DNA denotes DNA
T11546 1660-1665 NCBITaxon:10088 denotes mouse
T11547 1671-1677 SO_EXT:sequence_repeat_unit_or_region denotes repeat
T11548 1716-1731 CHEBI_SO_EXT:oligonucleotide denotes Oligonucleotide
T11549 1732-1738 CHEBI_SO_EXT:molecular_probe denotes probes
T11550 1768-1775 SO_EXT:sequence_repeat_unit_or_region denotes repeats
T11551 1823-1832 SO_EXT:satellite_unit_or_region denotes satellite
T11552 1833-1838 CHEBI_SO_EXT:molecular_probe denotes probe
T11553 1852-1867 CHEBI_SO_EXT:oligonucleotide denotes oligonucleotide
T11554 1888-1897 SO_EXT:satellite_unit_or_region denotes satellite
T11555 1898-1903 CHEBI_SO_EXT:molecular_probe denotes probe
T11556 1917-1932 CHEBI_SO_EXT:oligonucleotide denotes oligonucleotide
T11557 1949-1954 CHEBI_SO_EXT:molecular_probe denotes probe
T11558 1967-1969 SO_EXT:0000028 denotes bp
T11559 1970-1981 SO_EXT:0000006 denotes PCR product
T11560 1983-1990 SO_EXT:0000112 denotes primers
T11561 2026-2034 SO_EXT:sequence_insertion_process denotes inserted
T11562 2044-2049 NCBITaxon:10088 denotes mouse
T11563 2050-2056 PR_EXT:000004372 denotes agouti
T11564 2057-2061 SO_EXT:0000704 denotes gene
T11565 2122-2133 SO_EXT:0000006 denotes PCR product
T11566 2154-2160 SO_EXT:5_prime_LTR_unit_or_region denotes 5′ LTR
T11567 2177-2192 CHEBI_SO_EXT:oligonucleotide denotes oligonucleotide
T11568 2193-2202 SO_EXT:biological_sequence denotes sequences

2_test

Id Subject Object Predicate Lexical cue
16628246-12085230-85799785 236-238 12085230 denotes 40
16628246-14729260-85799786 1163-1164 14729260 denotes 4
16628246-10570185-85799787 1218-1220 10570185 denotes 15
16628246-8417345-85799788 1447-1449 8417345 denotes 41
16628246-10742099-85799789 1711-1713 10742099 denotes 11
16628246-11711429-85799790 1808-1810 11711429 denotes 42
16628246-7926745-85799791 2063-2065 7926745 denotes 43
T83163 236-238 12085230 denotes 40
T14123 1163-1164 14729260 denotes 4
T85420 1218-1220 10570185 denotes 15
T26504 1447-1449 8417345 denotes 41
T27595 1711-1713 10742099 denotes 11
T53645 1808-1810 11711429 denotes 42
T82024 2063-2065 7926745 denotes 43

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T11440 42-46 PR:000004503 denotes Atrx
T11441 51-59 CL:0002322 denotes ES cells
T11442 64-79 UBERON:0014374 denotes embryoid bodies
T11443 81-88 CL:0002322 denotes ES cell
T11444 108-112 PR:000004503 denotes Atrx
T11445 113-117 SO:0000359 denotes flox
T11446 118-124 SO:0001023 denotes allele
T11447 158-169 GO:0009294 denotes transfected
T11448 186-189 MOP:0000780 denotes cut
T11449 194-204 GO:0010467 denotes expression
T11450 205-212 SO:0000155 denotes plasmid
T11451 225-229 SO:0000243 denotes IRES
T11452 251-263 GO:0009294 denotes transfection
T11453 341-345 CHEBI:42768 denotes G418
T11454 523-531 SO:0005853 denotes cassette
T11455 563-576 GO:0097617 denotes hybridisation
T11456 586-592 SO:0000188 denotes intron
T11457 747-754 CHEBI:33893 denotes Reagent
T11458 821-831 GO:0097617 denotes hybridised
T11459 857-861 SO:0000147 denotes exon
T11460 872-876 PR:000004503 denotes Atrx
T11461 877-881 SO:0000704 denotes gene
T11462 898-905 SO:0000112 denotes primers
T11463 976-986 GO:0097617 denotes hybridised
T11464 994-1001 PR:000003676 denotes β-actin
T11465 1099-1103 PR:000004503 denotes Atrx
T11466 1177-1182 NCBITaxon:10088 denotes mouse
T11467 1199-1203 PR:000004503 denotes ATRX
T11468 1204-1212 GO:0042571 denotes antibody
T11469 1235-1245 GO:0007049 denotes cell cycle
T11470 1250-1259 GO:0006915 denotes apoptosis
T11471 1335-1342 CL:0002322 denotes ES cell
T11472 1358-1373 UBERON:0014374 denotes embryoid bodies
T11473 1452-1459 SO:0001026 denotes Genomic
T11474 1624-1629 NCBITaxon:9606 denotes human
T11475 1660-1665 NCBITaxon:10088 denotes mouse
T11476 1967-1969 SO:0000028 denotes bp
T11477 1970-1981 SO:0000006 denotes PCR product
T11478 1983-1990 SO:0000112 denotes primers
T11479 2044-2049 NCBITaxon:10088 denotes mouse
T11480 2050-2056 PR:000004372 denotes agouti
T11481 2057-2061 SO:0000704 denotes gene
T11482 2122-2133 SO:0000006 denotes PCR product