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PMC:1440874 / 46291-46569 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T10319 0-278 sentence denotes However, it was recently demonstrated that the paternal Atrx (called Xnp) allele is completely silenced in a normal mouse trophoblast stem cell line [32], suggesting that Atrx does not normally escape imprinted X-inactivation in the extraembryonic tissues of wild-type females.
T10320 1-8 RB denotes However
T10321 26-38 VBN denotes demonstrated
T10322 8-10 , denotes ,
T10323 10-12 PRP denotes it
T10324 13-16 VBD denotes was
T10325 17-25 RB denotes recently
T10326 39-43 IN denotes that
T10327 96-104 VBN denotes silenced
T10328 44-47 DT denotes the
T10329 75-81 NN denotes allele
T10330 48-56 JJ denotes paternal
T10331 57-61 NN denotes Atrx
T10332 62-63 -LRB- denotes (
T10333 63-69 VBN denotes called
T10334 70-73 NN denotes Xnp
T10335 73-74 -RRB- denotes )
T10336 82-84 VBZ denotes is
T10337 85-95 RB denotes completely
T10338 105-107 IN denotes in
T10339 108-109 DT denotes a
T10340 145-149 NN denotes line
T10341 110-116 JJ denotes normal
T10342 117-122 NN denotes mouse
T10343 123-134 NN denotes trophoblast
T10344 135-139 NN denotes stem
T10345 140-144 NN denotes cell
T10346 150-151 -LRB- denotes [
T10347 151-153 CD denotes 32
T10348 153-154 -RRB- denotes ]
T10349 154-156 , denotes ,
T10350 156-166 VBG denotes suggesting
T10351 167-171 IN denotes that
T10352 195-201 VB denotes escape
T10353 172-176 NN denotes Atrx
T10354 177-181 VBZ denotes does
T10355 182-185 RB denotes not
T10356 186-194 RB denotes normally
T10357 202-211 VBN denotes imprinted
T10358 214-226 NN denotes inactivation
T10359 212-213 NN denotes X
T10360 213-214 HYPH denotes -
T10361 227-229 IN denotes in
T10362 230-233 DT denotes the
T10363 249-256 NNS denotes tissues
T10364 234-248 JJ denotes extraembryonic
T10365 257-259 IN denotes of
T10366 260-264 JJ denotes wild
T10367 265-269 NN denotes type
T10368 264-265 HYPH denotes -
T10369 270-277 NNS denotes females
T10370 277-278 . denotes .
R6293 T10320 T10321 advmod However,demonstrated
R6294 T10322 T10321 punct ", ",demonstrated
R6295 T10323 T10321 nsubjpass it,demonstrated
R6296 T10324 T10321 auxpass was,demonstrated
R6297 T10325 T10321 advmod recently,demonstrated
R6298 T10326 T10327 mark that,silenced
R6299 T10327 T10321 ccomp silenced,demonstrated
R6300 T10328 T10329 det the,allele
R6301 T10329 T10327 nsubjpass allele,silenced
R6302 T10330 T10331 amod paternal,Atrx
R6303 T10331 T10329 nmod Atrx,allele
R6304 T10332 T10331 punct (,Atrx
R6305 T10333 T10331 acl called,Atrx
R6306 T10334 T10333 oprd Xnp,called
R6307 T10335 T10329 punct ),allele
R6308 T10336 T10327 auxpass is,silenced
R6309 T10337 T10327 advmod completely,silenced
R6310 T10338 T10327 prep in,silenced
R6311 T10339 T10340 det a,line
R6312 T10340 T10338 pobj line,in
R6313 T10341 T10340 amod normal,line
R6314 T10342 T10343 compound mouse,trophoblast
R6315 T10343 T10340 compound trophoblast,line
R6316 T10344 T10345 compound stem,cell
R6317 T10345 T10340 compound cell,line
R6318 T10346 T10347 punct [,32
R6319 T10347 T10321 parataxis 32,demonstrated
R6320 T10348 T10347 punct ],32
R6321 T10349 T10321 punct ", ",demonstrated
R6322 T10350 T10321 advcl suggesting,demonstrated
R6323 T10351 T10352 mark that,escape
R6324 T10352 T10350 ccomp escape,suggesting
R6325 T10353 T10352 nsubj Atrx,escape
R6326 T10354 T10352 aux does,escape
R6327 T10355 T10352 neg not,escape
R6328 T10356 T10352 advmod normally,escape
R6329 T10357 T10358 amod imprinted,inactivation
R6330 T10358 T10352 dobj inactivation,escape
R6331 T10359 T10358 compound X,inactivation
R6332 T10360 T10358 punct -,inactivation
R6333 T10361 T10358 prep in,inactivation
R6334 T10362 T10363 det the,tissues
R6335 T10363 T10361 pobj tissues,in
R6336 T10364 T10363 amod extraembryonic,tissues
R6337 T10365 T10363 prep of,tissues
R6338 T10366 T10367 amod wild,type
R6339 T10367 T10369 compound type,females
R6340 T10368 T10367 punct -,type
R6341 T10369 T10365 pobj females,of
R6342 T10370 T10321 punct .,demonstrated

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9831 57-61 PR_EXT:000004503 denotes Atrx
T9832 75-81 SO_EXT:0001023 denotes allele
T9833 96-104 GO:0016458 denotes silenced
T9834 117-122 NCBITaxon:10088 denotes mouse
T9835 123-134 UBERON:0000088 denotes trophoblast
T9836 123-134 _FRAGMENT denotes trophoblast
T9837 140-144 CL:0000351 denotes cell
T9838 135-144 CL:0000034 denotes stem cell
T9839 140-144 CL_GO_EXT:cell denotes cell
T9840 172-176 PR_EXT:000004503 denotes Atrx
T9841 202-226 GO:0060819 denotes imprinted X-inactivation
T9842 212-213 GO:0000805 denotes X
T9843 234-256 UBERON:0005292 denotes extraembryonic tissues
T9844 260-269 SO_EXT:wild_type_entity_or_quality denotes wild-type
T9845 270-277 PATO_UBERON_EXT:female_or_bearer_of_femaleness denotes females
R5919 T9837 T9836 _lexicallyChainedTo cell,trophoblast

2_test

Id Subject Object Predicate Lexical cue
16628246-14661031-85799775 151-153 14661031 denotes 32
T87099 151-153 14661031 denotes 32

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T9664 57-61 PR:000004503 denotes Atrx
T9665 75-81 SO:0001023 denotes allele
T9666 96-104 GO:0016458 denotes silenced
T9667 117-122 NCBITaxon:10088 denotes mouse
T9668 123-134 UBERON:0000088 denotes trophoblast
T9669 123-134 _FRAGMENT denotes trophoblast
T9670 140-144 CL:0000351 denotes cell
T9671 135-144 CL:0000034 denotes stem cell
T9672 172-176 PR:000004503 denotes Atrx
T9673 202-226 GO:0060819 denotes imprinted X-inactivation
T9674 212-213 GO:0000805 denotes X
T9675 234-256 UBERON:0005292 denotes extraembryonic tissues
R5914 T9670 T9669 _lexicallyChainedTo cell,trophoblast