![Logo](/assets/logo-d3f1fdf60522f0983e71f9fcc720cb7da5b55c0b748ed5bded3d2fbf81387bf0.png)
PMC:1440874 / 4391-5401
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1440874","sourcedb":"PMC","sourceid":"1440874","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1440874","text":"\nFigure 1 Schematic Representation of the ATRX Isoforms\nShown at the top is the human ATRX cDNA. The boxes represent the 36 exons. The introns are not to scale. The alternative splicing of exons 6 and 7 is indicated. Shown underneath are the two ATRX protein isoforms. Full-length ATRX (~280 kDa) is encoded by the largest open reading frame. The positions of the principal features (the PHD-like domain and the seven SWI/SNF-like motifs) are indicated. Above full-length ATRX is shown the truncated ATRXt isoform (apparent molecular weight of ~200 kDa) that arises through the failure to splice intron 11 and the use of an intronic poly(A) signal. The intron-encoded region of ATRXt is indicated as a filled grey box. Locations of recombinant proteins (A2, FXNP5, and H-300) used to generate antibodies are shown. The scale bar represents 200 amino acids. Disease-causing missense mutations are clustered in two regions of the gene: a PHD-like zinc finger domain and a SNF2-like ATPase domain (Figure 1) [6].","divisions":[{"label":"figure","span":{"begin":1,"end":857}},{"label":"label","span":{"begin":1,"end":9}},{"label":"caption","span":{"begin":11,"end":857}},{"label":"title","span":{"begin":11,"end":56}},{"label":"p","span":{"begin":57,"end":857}}],"tracks":[{"project":"craft-sa-dev","denotations":[{"id":"T1037","span":{"begin":0,"end":1010},"obj":"sentence"},{"id":"T1038","span":{"begin":858,"end":865},"obj":"NN"},{"id":"T1039","span":{"begin":866,"end":873},"obj":"VBG"},{"id":"T1040","span":{"begin":865,"end":866},"obj":"HYPH"},{"id":"T1041","span":{"begin":883,"end":892},"obj":"NNS"},{"id":"T1042","span":{"begin":874,"end":882},"obj":"NN"},{"id":"T1043","span":{"begin":897,"end":906},"obj":"VBN"},{"id":"T1044","span":{"begin":893,"end":896},"obj":"VBP"},{"id":"T1045","span":{"begin":907,"end":909},"obj":"IN"},{"id":"T1046","span":{"begin":910,"end":913},"obj":"CD"},{"id":"T1047","span":{"begin":914,"end":921},"obj":"NNS"},{"id":"T1048","span":{"begin":922,"end":924},"obj":"IN"},{"id":"T1049","span":{"begin":925,"end":928},"obj":"DT"},{"id":"T1050","span":{"begin":929,"end":933},"obj":"NN"},{"id":"T1051","span":{"begin":933,"end":935},"obj":":"},{"id":"T1052","span":{"begin":935,"end":936},"obj":"DT"},{"id":"T1053","span":{"begin":958,"end":964},"obj":"NN"},{"id":"T1054","span":{"begin":937,"end":940},"obj":"NN"},{"id":"T1055","span":{"begin":941,"end":945},"obj":"JJ"},{"id":"T1056","span":{"begin":940,"end":941},"obj":"HYPH"},{"id":"T1057","span":{"begin":946,"end":950},"obj":"NN"},{"id":"T1058","span":{"begin":951,"end":957},"obj":"NN"},{"id":"T1059","span":{"begin":965,"end":968},"obj":"CC"},{"id":"T1060","span":{"begin":969,"end":970},"obj":"DT"},{"id":"T1061","span":{"begin":988,"end":994},"obj":"NN"},{"id":"T1062","span":{"begin":971,"end":975},"obj":"NN"},{"id":"T1063","span":{"begin":976,"end":980},"obj":"JJ"},{"id":"T1064","span":{"begin":975,"end":976},"obj":"HYPH"},{"id":"T1065","span":{"begin":981,"end":987},"obj":"NN"},{"id":"T1066","span":{"begin":995,"end":996},"obj":"-LRB-"},{"id":"T1067","span":{"begin":996,"end":1002},"obj":"NN"},{"id":"T1068","span":{"begin":1003,"end":1004},"obj":"CD"},{"id":"T1069","span":{"begin":1004,"end":1005},"obj":"-RRB-"},{"id":"T1070","span":{"begin":1006,"end":1007},"obj":"-LRB-"},{"id":"T1071","span":{"begin":1007,"end":1008},"obj":"CD"},{"id":"T1072","span":{"begin":1008,"end":1009},"obj":"-RRB-"},{"id":"T1073","span":{"begin":1009,"end":1010},"obj":"."}],"relations":[{"id":"R549","pred":"npadvmod","subj":"T1038","obj":"T1039"},{"id":"R550","pred":"amod","subj":"T1039","obj":"T1041"},{"id":"R551","pred":"punct","subj":"T1040","obj":"T1039"},{"id":"R552","pred":"nsubjpass","subj":"T1041","obj":"T1043"},{"id":"R553","pred":"compound","subj":"T1042","obj":"T1041"},{"id":"R554","pred":"auxpass","subj":"T1044","obj":"T1043"},{"id":"R555","pred":"prep","subj":"T1045","obj":"T1043"},{"id":"R556","pred":"nummod","subj":"T1046","obj":"T1047"},{"id":"R557","pred":"pobj","subj":"T1047","obj":"T1045"},{"id":"R558","pred":"prep","subj":"T1048","obj":"T1047"},{"id":"R559","pred":"det","subj":"T1049","obj":"T1050"},{"id":"R560","pred":"pobj","subj":"T1050","obj":"T1048"},{"id":"R561","pred":"punct","subj":"T1051","obj":"T1047"},{"id":"R562","pred":"det","subj":"T1052","obj":"T1053"},{"id":"R563","pred":"appos","subj":"T1053","obj":"T1047"},{"id":"R564","pred":"npadvmod","subj":"T1054","obj":"T1055"},{"id":"R565","pred":"amod","subj":"T1055","obj":"T1053"},{"id":"R566","pred":"punct","subj":"T1056","obj":"T1055"},{"id":"R567","pred":"compound","subj":"T1057","obj":"T1053"},{"id":"R568","pred":"compound","subj":"T1058","obj":"T1053"},{"id":"R569","pred":"cc","subj":"T1059","obj":"T1053"},{"id":"R570","pred":"det","subj":"T1060","obj":"T1061"},{"id":"R571","pred":"conj","subj":"T1061","obj":"T1053"},{"id":"R572","pred":"npadvmod","subj":"T1062","obj":"T1063"},{"id":"R573","pred":"amod","subj":"T1063","obj":"T1061"},{"id":"R574","pred":"punct","subj":"T1064","obj":"T1063"},{"id":"R575","pred":"compound","subj":"T1065","obj":"T1061"},{"id":"R576","pred":"punct","subj":"T1066","obj":"T1067"},{"id":"R577","pred":"parataxis","subj":"T1067","obj":"T1043"},{"id":"R578","pred":"nummod","subj":"T1068","obj":"T1067"},{"id":"R579","pred":"punct","subj":"T1069","obj":"T1067"},{"id":"R580","pred":"punct","subj":"T1070","obj":"T1071"},{"id":"R581","pred":"parataxis","subj":"T1071","obj":"T1043"},{"id":"R582","pred":"punct","subj":"T1072","obj":"T1071"},{"id":"R583","pred":"punct","subj":"T1073","obj":"T1043"}],"attributes":[{"subj":"T1037","pred":"source","obj":"craft-sa-dev"},{"subj":"T1038","pred":"source","obj":"craft-sa-dev"},{"subj":"T1039","pred":"source","obj":"craft-sa-dev"},{"subj":"T1040","pred":"source","obj":"craft-sa-dev"},{"subj":"T1041","pred":"source","obj":"craft-sa-dev"},{"subj":"T1042","pred":"source","obj":"craft-sa-dev"},{"subj":"T1043","pred":"source","obj":"craft-sa-dev"},{"subj":"T1044","pred":"source","obj":"craft-sa-dev"},{"subj":"T1045","pred":"source","obj":"craft-sa-dev"},{"subj":"T1046","pred":"source","obj":"craft-sa-dev"},{"subj":"T1047","pred":"source","obj":"craft-sa-dev"},{"subj":"T1048","pred":"source","obj":"craft-sa-dev"},{"subj":"T1049","pred":"source","obj":"craft-sa-dev"},{"subj":"T1050","pred":"source","obj":"craft-sa-dev"},{"subj":"T1051","pred":"source","obj":"craft-sa-dev"},{"subj":"T1052","pred":"source","obj":"craft-sa-dev"},{"subj":"T1053","pred":"source","obj":"craft-sa-dev"},{"subj":"T1054","pred":"source","obj":"craft-sa-dev"},{"subj":"T1055","pred":"source","obj":"craft-sa-dev"},{"subj":"T1056","pred":"source","obj":"craft-sa-dev"},{"subj":"T1057","pred":"source","obj":"craft-sa-dev"},{"subj":"T1058","pred":"source","obj":"craft-sa-dev"},{"subj":"T1059","pred":"source","obj":"craft-sa-dev"},{"subj":"T1060","pred":"source","obj":"craft-sa-dev"},{"subj":"T1061","pred":"source","obj":"craft-sa-dev"},{"subj":"T1062","pred":"source","obj":"craft-sa-dev"},{"subj":"T1063","pred":"source","obj":"craft-sa-dev"},{"subj":"T1064","pred":"source","obj":"craft-sa-dev"},{"subj":"T1065","pred":"source","obj":"craft-sa-dev"},{"subj":"T1066","pred":"source","obj":"craft-sa-dev"},{"subj":"T1067","pred":"source","obj":"craft-sa-dev"},{"subj":"T1068","pred":"source","obj":"craft-sa-dev"},{"subj":"T1069","pred":"source","obj":"craft-sa-dev"},{"subj":"T1070","pred":"source","obj":"craft-sa-dev"},{"subj":"T1071","pred":"source","obj":"craft-sa-dev"},{"subj":"T1072","pred":"source","obj":"craft-sa-dev"},{"subj":"T1073","pred":"source","obj":"craft-sa-dev"}]},{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T650","span":{"begin":874,"end":882},"obj":"SO_EXT:missense_quality_or_entity"},{"id":"T651","span":{"begin":883,"end":892},"obj":"SO_EXT:sequence_alteration_entity_or_process"},{"id":"T652","span":{"begin":914,"end":924},"obj":"_FRAGMENT"},{"id":"T653","span":{"begin":929,"end":933},"obj":"SO_EXT:0000842"},{"id":"T654","span":{"begin":946,"end":950},"obj":"CHEBI_EXT:zinc"},{"id":"T655","span":{"begin":958,"end":964},"obj":"SO_EXT:0000417"},{"id":"T656","span":{"begin":971,"end":975},"obj":"PR_EXT:P22082"},{"id":"T657","span":{"begin":981,"end":987},"obj":"GO_EXT:0016887"},{"id":"T658","span":{"begin":988,"end":994},"obj":"SO_EXT:0000417"}],"relations":[{"id":"R246","pred":"_lexicallyChainedTo","subj":"T653","obj":"T652"}],"attributes":[{"subj":"T650","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T651","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T652","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T653","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T654","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T655","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T656","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T657","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T658","pred":"source","obj":"craft-ca-core-ex-dev"}]},{"project":"2_test","denotations":[{"id":"16628246-9326931-85799740","span":{"begin":1007,"end":1008},"obj":"9326931"},{"id":"T12168","span":{"begin":1007,"end":1008},"obj":"9326931"}],"attributes":[{"subj":"16628246-9326931-85799740","pred":"source","obj":"2_test"},{"subj":"T12168","pred":"source","obj":"2_test"}]},{"project":"craft-ca-core-dev","denotations":[{"id":"T537","span":{"begin":914,"end":924},"obj":"_FRAGMENT"},{"id":"T538","span":{"begin":929,"end":933},"obj":"SO:0000842"},{"id":"T539","span":{"begin":958,"end":964},"obj":"SO:0000417"},{"id":"T540","span":{"begin":971,"end":975},"obj":"PR:P22082"},{"id":"T541","span":{"begin":988,"end":994},"obj":"SO:0000417"}],"relations":[{"id":"R243","pred":"_lexicallyChainedTo","subj":"T538","obj":"T537"}],"attributes":[{"subj":"T537","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T538","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T539","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T540","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T541","pred":"source","obj":"craft-ca-core-dev"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"craft-sa-dev","color":"#dd93ec","default":true},{"id":"craft-ca-core-ex-dev","color":"#93ecc3"},{"id":"2_test","color":"#eca993"},{"id":"craft-ca-core-dev","color":"#9396ec"}]}]}}