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PMC:1440874 / 18871-19135 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T4161 0-264 sentence denotes We more accurately defined the onset of GATA1-cre expression using a ROSA26 reporter strain, in which a β-galactosidase/neor fusion reporter gene is expressed only after Cre-mediated excision of loxP-flanked transcription and translation termination signals [14].
T4162 1-3 PRP denotes We
T4163 20-27 VBN denotes defined
T4164 4-8 RBR denotes more
T4165 9-19 RB denotes accurately
T4166 28-31 DT denotes the
T4167 32-37 NN denotes onset
T4168 38-40 IN denotes of
T4169 41-46 NN denotes GATA1
T4170 47-50 NN denotes cre
T4171 46-47 HYPH denotes -
T4172 51-61 NN denotes expression
T4173 62-67 VBG denotes using
T4174 68-69 DT denotes a
T4175 86-92 NN denotes strain
T4176 70-76 NN denotes ROSA26
T4177 77-85 NN denotes reporter
T4178 92-94 , denotes ,
T4179 94-96 IN denotes in
T4180 150-159 VBN denotes expressed
T4181 97-102 WDT denotes which
T4182 103-104 DT denotes a
T4183 142-146 NN denotes gene
T4184 105-106 NN denotes β
T4185 107-120 NN denotes galactosidase
T4186 106-107 HYPH denotes -
T4187 126-132 NN denotes fusion
T4188 120-121 HYPH denotes /
T4189 121-125 NN denotes neor
T4190 133-141 NN denotes reporter
T4191 147-149 VBZ denotes is
T4192 160-164 RB denotes only
T4193 165-170 IN denotes after
T4194 171-174 NN denotes Cre
T4195 175-183 VBN denotes mediated
T4196 174-175 HYPH denotes -
T4197 184-192 NN denotes excision
T4198 193-195 IN denotes of
T4199 196-200 NN denotes loxP
T4200 201-208 VBN denotes flanked
T4201 200-201 HYPH denotes -
T4202 209-222 NN denotes transcription
T4203 223-226 CC denotes and
T4204 227-238 NN denotes translation
T4205 239-250 NN denotes termination
T4206 251-258 NNS denotes signals
T4207 259-260 -LRB- denotes [
T4208 260-262 CD denotes 14
T4209 262-263 -RRB- denotes ]
T4210 263-264 . denotes .
R2297 T4162 T4163 nsubj We,defined
R2298 T4164 T4165 advmod more,accurately
R2299 T4165 T4163 advmod accurately,defined
R2300 T4166 T4167 det the,onset
R2301 T4167 T4163 dobj onset,defined
R2302 T4168 T4167 prep of,onset
R2303 T4169 T4170 compound GATA1,cre
R2304 T4170 T4172 compound cre,expression
R2305 T4171 T4170 punct -,cre
R2306 T4172 T4168 pobj expression,of
R2307 T4173 T4163 advcl using,defined
R2308 T4174 T4175 det a,strain
R2309 T4175 T4173 dobj strain,using
R2310 T4176 T4175 compound ROSA26,strain
R2311 T4177 T4175 compound reporter,strain
R2312 T4178 T4175 punct ", ",strain
R2313 T4179 T4180 prep in,expressed
R2314 T4180 T4175 relcl expressed,strain
R2315 T4181 T4179 pobj which,in
R2316 T4182 T4183 det a,gene
R2317 T4183 T4180 nsubjpass gene,expressed
R2318 T4184 T4185 nmod β,galactosidase
R2319 T4185 T4187 nmod galactosidase,fusion
R2320 T4186 T4185 punct -,galactosidase
R2321 T4187 T4183 compound fusion,gene
R2322 T4188 T4185 punct /,galactosidase
R2323 T4189 T4185 appos neor,galactosidase
R2324 T4190 T4183 compound reporter,gene
R2325 T4191 T4180 auxpass is,expressed
R2326 T4192 T4193 advmod only,after
R2327 T4193 T4180 prep after,expressed
R2328 T4194 T4195 npadvmod Cre,mediated
R2329 T4195 T4197 amod mediated,excision
R2330 T4196 T4195 punct -,mediated
R2331 T4197 T4193 pobj excision,after
R2332 T4198 T4197 prep of,excision
R2333 T4199 T4200 npadvmod loxP,flanked
R2334 T4200 T4202 amod flanked,transcription
R2335 T4201 T4200 punct -,flanked
R2336 T4202 T4198 pobj transcription,of
R2337 T4203 T4197 cc and,excision
R2338 T4204 T4205 compound translation,termination
R2339 T4205 T4206 compound termination,signals
R2340 T4206 T4197 conj signals,excision
R2341 T4207 T4208 punct [,14
R2342 T4208 T4163 parataxis 14,defined
R2343 T4209 T4208 punct ],14
R2344 T4210 T4163 punct .,defined

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3738 41-46 PR_EXT:000007857 denotes GATA1
T3739 51-61 GO:0010467 denotes expression
T3740 105-120 GO_EXT:0004565 denotes β-galactosidase
T3741 121-125 GO_EXT:0008910 denotes neor
T3742 126-132 _FRAGMENT denotes fusion
T3743 142-146 SO_EXT:fusion_gene_or_gene_fusion denotes gene
T3744 150-159 GO:0010467 denotes expressed
T3745 184-192 SO_EXT:sequence_deletion_process denotes excision
T3746 196-208 SO:0000359 denotes loxP-flanked
T3747 209-222 GO_EXT:transcription denotes transcription
T3748 209-222 _FRAGMENT denotes transcription
T3749 239-258 SO_EXT:0000141 denotes termination signals
T3750 227-250 GO:0006415 denotes translation termination
T3751 227-258 SO_EXT:0000319 denotes translation termination signals
R2101 T3743 T3742 _lexicallyChainedTo gene,fusion
R2102 T3749 T3748 _lexicallyChainedTo termination signals,transcription

2_test

Id Subject Object Predicate Lexical cue
16628246-10220414-85799752 260-262 10220414 denotes 14
T76730 260-262 10220414 denotes 14

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3531 41-46 PR:000007857 denotes GATA1
T3532 51-61 GO:0010467 denotes expression
T3533 150-159 GO:0010467 denotes expressed
T3534 196-208 SO:0000359 denotes loxP-flanked
T3535 209-222 _FRAGMENT denotes transcription
T3536 239-258 SO:0000141 denotes termination signals
T3537 227-250 GO:0006415 denotes translation termination
T3538 227-258 SO:0000319 denotes translation termination signals
R2098 T3536 T3535 _lexicallyChainedTo termination signals,transcription