PMC:1440874 / 10848-11129
Annnotations
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1929 | 0-281 | sentence | denotes | Northern and Western blot analyses (Figure 2D and 2E) revealed that the full-length Atrx transcript and protein is completely abolished in the Atrx Δ18Δneo recombinant clones, suggesting that deletion of this region has a highly destabilising effect on the full-length transcript. |
| T1930 | 1-9 | NNP | denotes | Northern |
| T1931 | 22-26 | NN | denotes | blot |
| T1932 | 10-13 | CC | denotes | and |
| T1933 | 14-21 | NNP | denotes | Western |
| T1934 | 27-35 | NNS | denotes | analyses |
| T1935 | 55-63 | VBD | denotes | revealed |
| T1936 | 36-37 | -LRB- | denotes | ( |
| T1937 | 44-46 | NN | denotes | 2D |
| T1938 | 37-43 | NN | denotes | Figure |
| T1939 | 47-50 | CC | denotes | and |
| T1940 | 51-53 | NN | denotes | 2E |
| T1941 | 53-54 | -RRB- | denotes | ) |
| T1942 | 64-68 | IN | denotes | that |
| T1943 | 127-136 | VBN | denotes | abolished |
| T1944 | 69-72 | DT | denotes | the |
| T1945 | 90-100 | NN | denotes | transcript |
| T1946 | 73-77 | JJ | denotes | full |
| T1947 | 78-84 | NN | denotes | length |
| T1948 | 77-78 | HYPH | denotes | - |
| T1949 | 85-89 | NN | denotes | Atrx |
| T1950 | 101-104 | CC | denotes | and |
| T1951 | 105-112 | NN | denotes | protein |
| T1952 | 113-115 | VBZ | denotes | is |
| T1953 | 116-126 | RB | denotes | completely |
| T1954 | 137-139 | IN | denotes | in |
| T1955 | 140-143 | DT | denotes | the |
| T1956 | 169-175 | NNS | denotes | clones |
| T1957 | 144-156 | NN | denotes | Atrx Δ18Δneo |
| T1958 | 157-168 | JJ | denotes | recombinant |
| T1959 | 175-177 | , | denotes | , |
| T1960 | 177-187 | VBG | denotes | suggesting |
| T1961 | 188-192 | IN | denotes | that |
| T1962 | 217-220 | VBZ | denotes | has |
| T1963 | 193-201 | NN | denotes | deletion |
| T1964 | 202-204 | IN | denotes | of |
| T1965 | 205-209 | DT | denotes | this |
| T1966 | 210-216 | NN | denotes | region |
| T1967 | 221-222 | DT | denotes | a |
| T1968 | 244-250 | NN | denotes | effect |
| T1969 | 223-229 | RB | denotes | highly |
| T1970 | 230-243 | JJ | denotes | destabilising |
| T1971 | 251-253 | IN | denotes | on |
| T1972 | 254-257 | DT | denotes | the |
| T1973 | 270-280 | NN | denotes | transcript |
| T1974 | 258-262 | JJ | denotes | full |
| T1975 | 263-269 | NN | denotes | length |
| T1976 | 262-263 | HYPH | denotes | - |
| T1977 | 280-281 | . | denotes | . |
| R1168 | T1930 | T1931 | nmod | Northern,blot |
| R1169 | T1931 | T1934 | compound | blot,analyses |
| R1170 | T1932 | T1930 | cc | and,Northern |
| R1171 | T1933 | T1930 | conj | Western,Northern |
| R1172 | T1934 | T1935 | nsubj | analyses,revealed |
| R1173 | T1936 | T1937 | punct | (,2D |
| R1174 | T1937 | T1934 | parataxis | 2D,analyses |
| R1175 | T1938 | T1937 | compound | Figure,2D |
| R1176 | T1939 | T1937 | cc | and,2D |
| R1177 | T1940 | T1937 | conj | 2E,2D |
| R1178 | T1941 | T1937 | punct | ),2D |
| R1179 | T1942 | T1943 | mark | that,abolished |
| R1180 | T1943 | T1935 | ccomp | abolished,revealed |
| R1181 | T1944 | T1945 | det | the,transcript |
| R1182 | T1945 | T1943 | nsubjpass | transcript,abolished |
| R1183 | T1946 | T1947 | amod | full,length |
| R1184 | T1947 | T1945 | compound | length,transcript |
| R1185 | T1948 | T1947 | punct | -,length |
| R1186 | T1949 | T1945 | compound | Atrx,transcript |
| R1187 | T1950 | T1945 | cc | and,transcript |
| R1188 | T1951 | T1945 | conj | protein,transcript |
| R1189 | T1952 | T1943 | auxpass | is,abolished |
| R1190 | T1953 | T1943 | advmod | completely,abolished |
| R1191 | T1954 | T1943 | prep | in,abolished |
| R1192 | T1955 | T1956 | det | the,clones |
| R1193 | T1956 | T1954 | pobj | clones,in |
| R1194 | T1957 | T1958 | npadvmod | Atrx Δ18Δneo,recombinant |
| R1195 | T1958 | T1956 | amod | recombinant,clones |
| R1196 | T1959 | T1943 | punct | ", ",abolished |
| R1197 | T1960 | T1943 | advcl | suggesting,abolished |
| R1198 | T1961 | T1962 | mark | that,has |
| R1199 | T1962 | T1960 | ccomp | has,suggesting |
| R1200 | T1963 | T1962 | nsubj | deletion,has |
| R1201 | T1964 | T1963 | prep | of,deletion |
| R1202 | T1965 | T1966 | det | this,region |
| R1203 | T1966 | T1964 | pobj | region,of |
| R1204 | T1967 | T1968 | det | a,effect |
| R1205 | T1968 | T1962 | dobj | effect,has |
| R1206 | T1969 | T1970 | advmod | highly,destabilising |
| R1207 | T1970 | T1968 | amod | destabilising,effect |
| R1208 | T1971 | T1962 | prep | on,has |
| R1209 | T1972 | T1973 | det | the,transcript |
| R1210 | T1973 | T1971 | pobj | transcript,on |
| R1211 | T1974 | T1975 | amod | full,length |
| R1212 | T1975 | T1973 | compound | length,transcript |
| R1213 | T1976 | T1975 | punct | -,length |
| R1214 | T1977 | T1935 | punct | .,revealed |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the bag model. You can change it to the chain model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1551 | 85-89 | PR_EXT:000004503 | denotes | Atrx |
| T1552 | 90-100 | SO_EXT:0000673 | denotes | transcript |
| T1553 | 105-112 | CHEBI_PR_EXT:protein | denotes | protein |
| T1554 | 144-148 | PR_EXT:000004503 | denotes | Atrx |
| T1555 | 157-168 | GO_SO_EXT:sequence_rearrangement_process | denotes | recombinant |
| T1556 | 169-175 | SO_EXT:sequence_cloned_entity | denotes | clones |
| T1557 | 193-201 | SO_EXT:sequence_deletion_entity_or_process | denotes | deletion |
| T1558 | 270-280 | SO_EXT:0000673 | denotes | transcript |
craft-ca-core-dev
Below, discontinuous spans are shown in the bag model. You can change it to the chain model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1447 | 85-89 | PR:000004503 | denotes | Atrx |
| T1448 | 90-100 | SO:0000673 | denotes | transcript |
| T1449 | 144-148 | PR:000004503 | denotes | Atrx |
| T1450 | 270-280 | SO:0000673 | denotes | transcript |