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PMC:1435744 / 41645-42179 JSONTXT

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craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T23787 8-13 CL_GO_EXT:cell denotes cells
T23788 111-117 NCBITaxon:27592 denotes bovine
T23789 118-123 UBERON:0001977 denotes serum
T23790 143-153 CHEBI:17334 denotes penicillin
T23791 168-180 CHEBI:17076 denotes streptomycin
T23792 192-204 GO:0009294 denotes transfection
T23793 216-221 CL_GO_EXT:cell denotes cells
T23794 244-261 CHEBI:77635 denotes calcium phosphate
T23795 280-292 GO:0009294 denotes transfection
T23796 293-300 CHEBI_EXT:33893 denotes reagent
T23797 329-334 CL_GO_EXT:cell denotes cells
T23798 400-411 CHEBI_EXT:L_glutamine denotes L-glutamine
T23799 402-411 CHEBI_SO_EXT:glutamine denotes glutamine
T23800 440-458 CHEBI:32139 denotes sodium bicarbonate
T23801 479-491 GO:0009294 denotes transfection

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T23775 111-117 NCBITaxon:27592 denotes bovine
T23776 118-123 UBERON:0001977 denotes serum
T23777 143-153 CHEBI:17334 denotes penicillin
T23778 168-180 CHEBI:17076 denotes streptomycin
T23779 192-204 GO:0009294 denotes transfection
T23780 244-261 CHEBI:77635 denotes calcium phosphate
T23781 280-292 GO:0009294 denotes transfection
T23782 293-300 CHEBI:33893 denotes reagent
T23783 440-458 CHEBI:32139 denotes sodium bicarbonate
T23784 479-491 GO:0009294 denotes transfection

craft-sa-dev

Id Subject Object Predicate Lexical cue
T23807 0-7 NN denotes HEK293T
T23808 8-13 NNS denotes cells
T23809 19-29 VBN denotes maintained
T23810 14-18 VBD denotes were
T23811 30-32 IN denotes at
T23812 33-35 CD denotes 37
T23813 35-37 NN denotes °C
T23814 38-40 IN denotes in
T23815 41-49 NNP denotes Dulbecco
T23816 69-75 NN denotes medium
T23817 49-51 POS denotes 's
T23818 52-60 VBN denotes modified
T23819 61-66 NNP denotes Eagle
T23820 66-68 POS denotes 's
T23821 76-77 -LRB- denotes (
T23822 77-81 NN denotes DMEM
T23823 81-82 -RRB- denotes )
T23824 83-95 VBN denotes supplemented
T23825 96-100 IN denotes with
T23826 101-103 CD denotes 10
T23827 103-104 NN denotes %
T23828 118-123 NN denotes serum
T23829 105-110 JJ denotes fetal
T23830 111-117 JJ denotes bovine
T23831 124-125 -LRB- denotes (
T23832 125-130 NNP denotes Sigma
T23833 130-131 -RRB- denotes )
T23834 131-133 , denotes ,
T23835 133-136 CD denotes 100
T23836 137-139 NN denotes IU
T23837 143-153 NN denotes penicillin
T23838 139-140 SYM denotes /
T23839 140-142 NN denotes ml
T23840 154-157 CC denotes and
T23841 158-161 CD denotes 100
T23842 162-164 NN denotes μg
T23843 168-180 NN denotes streptomycin
T23844 164-165 SYM denotes /
T23845 165-167 NN denotes ml
T23846 180-181 . denotes .
T23847 181-309 sentence denotes Transient transfection of HEK293T cells was carried out using calcium phosphate method or Fugene6 transfection reagent (Roche).
T23848 182-191 JJ denotes Transient
T23849 192-204 NN denotes transfection
T23850 226-233 VBN denotes carried
T23851 205-207 IN denotes of
T23852 208-215 NN denotes HEK293T
T23853 216-221 NNS denotes cells
T23854 222-225 VBD denotes was
T23855 234-237 RP denotes out
T23856 238-243 VBG denotes using
T23857 244-251 NN denotes calcium
T23858 252-261 NN denotes phosphate
T23859 262-268 NN denotes method
T23860 269-271 CC denotes or
T23861 272-279 NN denotes Fugene6
T23862 293-300 NN denotes reagent
T23863 280-292 NN denotes transfection
T23864 301-302 -LRB- denotes (
T23865 302-307 NNP denotes Roche
T23866 307-308 -RRB- denotes )
T23867 308-309 . denotes .
T23868 309-468 sentence denotes Y79 retinoblastoma cells were maintained in Iscove's modified Dulbecco's medium with 4 mM L-glutamine adjusted to contain 1.5 g/L sodium bicarbonate, 20% FBS.
T23869 310-313 NN denotes Y79
T23870 329-334 NNS denotes cells
T23871 314-328 NN denotes retinoblastoma
T23872 340-350 VBN denotes maintained
T23873 335-339 VBD denotes were
T23874 351-353 IN denotes in
T23875 354-360 NNP denotes Iscove
T23876 383-389 NN denotes medium
T23877 360-362 POS denotes 's
T23878 363-371 VBN denotes modified
T23879 372-380 NNP denotes Dulbecco
T23880 380-382 POS denotes 's
T23881 390-394 IN denotes with
T23882 395-396 CD denotes 4
T23883 397-399 NN denotes mM
T23884 402-411 NN denotes glutamine
T23885 400-401 NN denotes L
T23886 401-402 HYPH denotes -
T23887 412-420 VBN denotes adjusted
T23888 421-423 TO denotes to
T23889 424-431 VB denotes contain
T23890 432-435 CD denotes 1.5
T23891 436-437 NN denotes g
T23892 447-458 NN denotes bicarbonate
T23893 437-438 SYM denotes /
T23894 438-439 NN denotes L
T23895 440-446 NN denotes sodium
T23896 458-460 , denotes ,
T23897 460-462 CD denotes 20
T23898 462-463 NN denotes %
T23899 464-467 NN denotes FBS
T23900 467-468 . denotes .
T23901 468-534 sentence denotes Transient transfection was carried out using TransIt LT1 (Mirus).
T23902 469-478 JJ denotes Transient
T23903 479-491 NN denotes transfection
T23904 496-503 VBN denotes carried
T23905 492-495 VBD denotes was
T23906 504-507 RP denotes out
T23907 508-513 VBG denotes using
T23908 514-521 NN denotes TransIt
T23909 522-525 NN denotes LT1
T23910 526-527 -LRB- denotes (
T23911 527-532 NNP denotes Mirus
T23912 532-533 -RRB- denotes )
T23913 533-534 . denotes .
R6766 T23807 T23808 compound HEK293T,cells
R6767 T23808 T23809 nsubjpass cells,maintained
R6768 T23810 T23809 auxpass were,maintained
R6769 T23811 T23809 prep at,maintained
R6770 T23812 T23813 nummod 37,°C
R6771 T23813 T23811 pobj °C,at
R6772 T23814 T23809 prep in,maintained
R6773 T23815 T23816 poss Dulbecco,medium
R6774 T23816 T23814 pobj medium,in
R6775 T23817 T23815 case 's,Dulbecco
R6776 T23818 T23816 amod modified,medium
R6777 T23819 T23816 poss Eagle,medium
R6778 T23820 T23819 case 's,Eagle
R6779 T23821 T23816 punct (,medium
R6780 T23822 T23816 appos DMEM,medium
R6781 T23823 T23816 punct ),medium
R6782 T23824 T23816 acl supplemented,medium
R6783 T23825 T23824 prep with,supplemented
R6784 T23826 T23827 nummod 10,%
R6785 T23827 T23828 nmod %,serum
R6786 T23828 T23825 pobj serum,with
R6787 T23829 T23830 amod fetal,bovine
R6788 T23830 T23828 amod bovine,serum
R6789 T23831 T23832 punct (,Sigma
R6790 T23832 T23828 parataxis Sigma,serum
R6791 T23833 T23832 punct ),Sigma
R6792 T23834 T23828 punct ", ",serum
R6793 T23835 T23836 nummod 100,IU
R6794 T23836 T23837 nmod IU,penicillin
R6795 T23837 T23828 conj penicillin,serum
R6796 T23838 T23839 punct /,ml
R6797 T23839 T23836 prep ml,IU
R6798 T23840 T23837 cc and,penicillin
R6799 T23841 T23842 nummod 100,μg
R6800 T23842 T23843 nmod μg,streptomycin
R6801 T23843 T23837 conj streptomycin,penicillin
R6802 T23844 T23845 punct /,ml
R6803 T23845 T23842 prep ml,μg
R6804 T23846 T23809 punct .,maintained
R6805 T23848 T23849 amod Transient,transfection
R6806 T23849 T23850 nsubjpass transfection,carried
R6807 T23851 T23849 prep of,transfection
R6808 T23852 T23853 compound HEK293T,cells
R6809 T23853 T23851 pobj cells,of
R6810 T23854 T23850 auxpass was,carried
R6811 T23855 T23850 prt out,carried
R6812 T23856 T23850 advcl using,carried
R6813 T23857 T23858 compound calcium,phosphate
R6814 T23858 T23859 compound phosphate,method
R6815 T23859 T23856 dobj method,using
R6816 T23860 T23859 cc or,method
R6817 T23861 T23862 compound Fugene6,reagent
R6818 T23862 T23859 conj reagent,method
R6819 T23863 T23862 compound transfection,reagent
R6820 T23864 T23865 punct (,Roche
R6821 T23865 T23862 parataxis Roche,reagent
R6822 T23866 T23865 punct ),Roche
R6823 T23867 T23850 punct .,carried
R6824 T23869 T23870 compound Y79,cells
R6825 T23870 T23872 nsubjpass cells,maintained
R6826 T23871 T23870 compound retinoblastoma,cells
R6827 T23873 T23872 auxpass were,maintained
R6828 T23874 T23872 prep in,maintained
R6829 T23875 T23876 poss Iscove,medium
R6830 T23876 T23874 pobj medium,in
R6831 T23877 T23875 case 's,Iscove
R6832 T23878 T23876 amod modified,medium
R6833 T23879 T23876 poss Dulbecco,medium
R6834 T23880 T23879 case 's,Dulbecco
R6835 T23881 T23876 prep with,medium
R6836 T23882 T23883 nummod 4,mM
R6837 T23883 T23884 compound mM,glutamine
R6838 T23884 T23881 pobj glutamine,with
R6839 T23885 T23884 compound L,glutamine
R6840 T23886 T23884 punct -,glutamine
R6841 T23887 T23884 acl adjusted,glutamine
R6842 T23888 T23889 aux to,contain
R6843 T23889 T23887 advcl contain,adjusted
R6844 T23890 T23891 nummod 1.5,g
R6845 T23891 T23892 nmod g,bicarbonate
R6846 T23892 T23889 dobj bicarbonate,contain
R6847 T23893 T23894 punct /,L
R6848 T23894 T23891 prep L,g
R6849 T23895 T23892 compound sodium,bicarbonate
R6850 T23896 T23892 punct ", ",bicarbonate
R6851 T23897 T23898 nummod 20,%
R6852 T23898 T23899 compound %,FBS
R6853 T23899 T23892 npadvmod FBS,bicarbonate
R6854 T23900 T23872 punct .,maintained
R6855 T23902 T23903 amod Transient,transfection
R6856 T23903 T23904 nsubjpass transfection,carried
R6857 T23905 T23904 auxpass was,carried
R6858 T23906 T23904 prt out,carried
R6859 T23907 T23904 advcl using,carried
R6860 T23908 T23909 compound TransIt,LT1
R6861 T23909 T23907 dobj LT1,using
R6862 T23910 T23911 punct (,Mirus
R6863 T23911 T23909 parataxis Mirus,LT1
R6864 T23912 T23911 punct ),Mirus
R6865 T23913 T23904 punct .,carried