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PMC:1435744 / 24324-25059 JSONTXT

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craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T13821 13-20 GO:0005634 denotes nuclear
T13822 13-40 SO_EXT:0001528 denotes nuclear localization signal
T13823 21-33 GO_PATO_EXT:biological_localization_process_or_quality denotes localization
T13824 48-58 CHEBI_SO_EXT:N_terminus_or_N_terminal_region denotes N-terminus
T13825 66-70 PR_EXT:000014441 denotes mr-s
T13826 71-78 CHEBI_PR_EXT:protein denotes protein
T13827 119-123 PR_EXT:000014441 denotes mr-s
T13828 124-131 CHEBI_PR_EXT:protein denotes protein
T13829 132-141 GO_PATO_EXT:biological_localization_process_or_quality denotes localizes
T13830 149-156 GO:0005634 denotes nucleus
T13831 175-186 GO_UBERON_EXT:cellular_component_or_cell_part denotes subcellular
T13832 178-186 CL_GO_EXT:cell denotes cellular
T13833 187-199 GO_PATO_EXT:biological_localization_process_or_quality denotes localization
T13834 203-207 PR_EXT:000014441 denotes mr-s
T13835 211-220 NCBITaxon:40674 denotes mammalian
T13836 221-226 CL_GO_EXT:cell denotes cells
T13837 248-254 CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process denotes tagged
T13838 267-271 PR_EXT:000014441 denotes mr-s
T13839 272-279 SO_EXT:0000155 denotes plasmid
T13840 293-298 CL_GO_EXT:cell denotes cells
T13841 336-340 PR_EXT:000014441 denotes mr-s
T13842 341-348 CHEBI_PR_EXT:protein denotes protein
T13843 349-358 GO_PATO_EXT:biological_localization_process_or_quality denotes localized
T13844 373-383 _FRAGMENT denotes nucleus of
T13845 392-397 GO:0005634 denotes cells
T13846 392-397 CL_GO_EXT:cell denotes cells
T13847 435-447 GO_PATO_EXT:biological_localization_process_or_quality denotes localization
T13848 455-459 PR_EXT:000014441 denotes mr-s
T13849 460-467 CHEBI_PR_EXT:protein denotes protein
T13850 481-485 PR_EXT:000014441 denotes mr-s
T13851 512-516 CHEBI:51231 denotes DAPI
T13852 557-561 PR_EXT:000014441 denotes mr-s
T13853 562-569 CHEBI_PR_EXT:protein denotes protein
T13854 570-579 GO_PATO_EXT:biological_localization_process_or_quality denotes localizes
T13855 602-609 GO:0005634 denotes nucleus
T13856 613-622 NCBITaxon:40674 denotes mammalian
T13857 623-628 CL_GO_EXT:cell denotes cells
T13858 659-663 PR_EXT:000014441 denotes mr-s
T13859 664-671 CHEBI_PR_EXT:protein denotes protein
T13860 687-702 GO_EXT:transcription denotes transcriptional
T13861 703-713 GO:0065007 denotes regulation
T13862 731-734 PR_EXT:000007229 denotes TEL
R3805 T13845 T13844 _lexicallyChainedTo cells,nucleus of

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T13793 13-20 GO:0005634 denotes nuclear
T13794 13-40 SO:0001528 denotes nuclear localization signal
T13795 66-70 PR:000014441 denotes mr-s
T13796 119-123 PR:000014441 denotes mr-s
T13797 149-156 GO:0005634 denotes nucleus
T13798 203-207 PR:000014441 denotes mr-s
T13799 211-220 NCBITaxon:40674 denotes mammalian
T13800 267-271 PR:000014441 denotes mr-s
T13801 272-279 SO:0000155 denotes plasmid
T13802 336-340 PR:000014441 denotes mr-s
T13803 373-383 _FRAGMENT denotes nucleus of
T13804 392-397 GO:0005634 denotes cells
T13805 455-459 PR:000014441 denotes mr-s
T13806 481-485 PR:000014441 denotes mr-s
T13807 512-516 CHEBI:51231 denotes DAPI
T13808 557-561 PR:000014441 denotes mr-s
T13809 602-609 GO:0005634 denotes nucleus
T13810 613-622 NCBITaxon:40674 denotes mammalian
T13811 659-663 PR:000014441 denotes mr-s
T13812 703-713 GO:0065007 denotes regulation
T13813 731-734 PR:000007229 denotes TEL
R3804 T13804 T13803 _lexicallyChainedTo cells,nucleus of

craft-sa-dev

Id Subject Object Predicate Lexical cue
T13875 0-3 DT denotes The
T13876 34-40 NN denotes signal
T13877 4-12 JJ denotes putative
T13878 13-20 JJ denotes nuclear
T13879 21-33 NN denotes localization
T13880 101-109 VBZ denotes suggests
T13881 41-43 IN denotes at
T13882 44-47 DT denotes the
T13883 50-58 NN denotes terminus
T13884 48-49 NN denotes N
T13885 49-50 HYPH denotes -
T13886 59-61 IN denotes of
T13887 62-65 DT denotes the
T13888 71-78 NN denotes protein
T13889 66-68 NN denotes mr
T13890 69-70 NN denotes s
T13891 68-69 HYPH denotes -
T13892 79-80 -LRB- denotes (
T13893 96-99 NN denotes box
T13894 80-84 NN denotes Fig.
T13895 85-87 NN denotes 1A
T13896 87-89 , denotes ,
T13897 89-95 JJ denotes dashed
T13898 99-100 -RRB- denotes )
T13899 110-114 IN denotes that
T13900 132-141 VBZ denotes localizes
T13901 115-118 DT denotes the
T13902 124-131 NN denotes protein
T13903 119-121 NN denotes mr
T13904 122-123 NN denotes s
T13905 121-122 HYPH denotes -
T13906 142-144 IN denotes in
T13907 145-148 DT denotes the
T13908 149-156 NN denotes nucleus
T13909 156-157 . denotes .
T13910 157-299 sentence denotes To determine the subcellular localization of mr-s in mammalian cells, we introduced an HA-tagged full-length mr-s plasmid into HEK293T cells.
T13911 158-160 TO denotes To
T13912 161-170 VB denotes determine
T13913 231-241 VBD denotes introduced
T13914 171-174 DT denotes the
T13915 187-199 NN denotes localization
T13916 175-186 JJ denotes subcellular
T13917 200-202 IN denotes of
T13918 203-205 NN denotes mr
T13919 206-207 NN denotes s
T13920 205-206 HYPH denotes -
T13921 208-210 IN denotes in
T13922 211-220 JJ denotes mammalian
T13923 221-226 NNS denotes cells
T13924 226-228 , denotes ,
T13925 228-230 PRP denotes we
T13926 242-244 DT denotes an
T13927 272-279 NN denotes plasmid
T13928 245-247 NN denotes HA
T13929 248-254 VBN denotes tagged
T13930 247-248 HYPH denotes -
T13931 255-259 JJ denotes full
T13932 260-266 NN denotes length
T13933 259-260 HYPH denotes -
T13934 267-269 NN denotes mr
T13935 270-271 NN denotes s
T13936 269-270 HYPH denotes -
T13937 280-284 IN denotes into
T13938 285-292 NN denotes HEK293T
T13939 293-298 NNS denotes cells
T13940 298-299 . denotes .
T13941 299-411 sentence denotes Confocal microscopy showed that the mr-s protein localized mainly in the nucleus of HEK293T cells (Fig. 6A, B).
T13942 300-308 JJ denotes Confocal
T13943 309-319 NN denotes microscopy
T13944 320-326 VBD denotes showed
T13945 327-331 IN denotes that
T13946 349-358 VBN denotes localized
T13947 332-335 DT denotes the
T13948 341-348 NN denotes protein
T13949 336-338 NN denotes mr
T13950 339-340 NN denotes s
T13951 338-339 HYPH denotes -
T13952 359-365 RB denotes mainly
T13953 366-368 IN denotes in
T13954 369-372 DT denotes the
T13955 373-380 NN denotes nucleus
T13956 381-383 IN denotes of
T13957 384-391 NN denotes HEK293T
T13958 392-397 NNS denotes cells
T13959 398-399 -LRB- denotes (
T13960 408-409 NN denotes B
T13961 399-403 NN denotes Fig.
T13962 404-406 NN denotes 6A
T13963 406-408 , denotes ,
T13964 409-410 -RRB- denotes )
T13965 410-411 . denotes .
T13966 411-529 sentence denotes To confirm the precise localization of the mr-s protein, full-length mr-s was co-immunostained with DAPI (Fig. 6C–E).
T13967 412-414 TO denotes To
T13968 415-422 VB denotes confirm
T13969 490-506 VBN denotes co-immunostained
T13970 423-426 DT denotes the
T13971 435-447 NN denotes localization
T13972 427-434 JJ denotes precise
T13973 448-450 IN denotes of
T13974 451-454 DT denotes the
T13975 460-467 NN denotes protein
T13976 455-457 NN denotes mr
T13977 458-459 NN denotes s
T13978 457-458 HYPH denotes -
T13979 467-469 , denotes ,
T13980 469-473 JJ denotes full
T13981 474-480 NN denotes length
T13982 473-474 HYPH denotes -
T13983 484-485 NN denotes s
T13984 481-483 NN denotes mr
T13985 483-484 HYPH denotes -
T13986 486-489 VBD denotes was
T13987 507-511 IN denotes with
T13988 512-516 NN denotes DAPI
T13989 517-518 -LRB- denotes (
T13990 523-525 NN denotes 6C
T13991 518-522 NN denotes Fig.
T13992 525-526 SYM denotes –
T13993 526-527 NN denotes E
T13994 527-528 -RRB- denotes )
T13995 528-529 . denotes .
T13996 529-735 sentence denotes These data showed that the mr-s protein localizes preferentially to the nucleus in mammalian cells, supporting the idea that the mr-s protein is involved in transcriptional regulation as are ph and/or TEL.
T13997 530-535 DT denotes These
T13998 536-540 NNS denotes data
T13999 541-547 VBD denotes showed
T14000 548-552 IN denotes that
T14001 570-579 VBZ denotes localizes
T14002 553-556 DT denotes the
T14003 562-569 NN denotes protein
T14004 557-559 NN denotes mr
T14005 560-561 NN denotes s
T14006 559-560 HYPH denotes -
T14007 580-594 RB denotes preferentially
T14008 595-597 IN denotes to
T14009 598-601 DT denotes the
T14010 602-609 NN denotes nucleus
T14011 610-612 IN denotes in
T14012 613-622 JJ denotes mammalian
T14013 623-628 NNS denotes cells
T14014 628-630 , denotes ,
T14015 630-640 VBG denotes supporting
T14016 641-644 DT denotes the
T14017 645-649 NN denotes idea
T14018 650-654 IN denotes that
T14019 675-683 VBN denotes involved
T14020 655-658 DT denotes the
T14021 664-671 NN denotes protein
T14022 659-661 NN denotes mr
T14023 662-663 NN denotes s
T14024 661-662 HYPH denotes -
T14025 672-674 VBZ denotes is
T14026 684-686 IN denotes in
T14027 687-702 JJ denotes transcriptional
T14028 703-713 NN denotes regulation
T14029 714-716 IN denotes as
T14030 717-720 VBP denotes are
T14031 721-723 NN denotes ph
T14032 724-727 CC denotes and
T14033 727-728 HYPH denotes /
T14034 728-730 CC denotes or
T14035 731-734 NN denotes TEL
T14036 734-735 . denotes .
R3816 T13875 T13876 det The,signal
R3817 T13876 T13880 nsubj signal,suggests
R3818 T13877 T13876 amod putative,signal
R3819 T13878 T13879 amod nuclear,localization
R3820 T13879 T13876 compound localization,signal
R3821 T13881 T13876 prep at,signal
R3822 T13882 T13883 det the,terminus
R3823 T13883 T13881 pobj terminus,at
R3824 T13884 T13883 compound N,terminus
R3825 T13885 T13883 punct -,terminus
R3826 T13886 T13883 prep of,terminus
R3827 T13887 T13888 det the,protein
R3828 T13888 T13886 pobj protein,of
R3829 T13889 T13890 compound mr,s
R3830 T13890 T13888 compound s,protein
R3831 T13891 T13890 punct -,s
R3832 T13892 T13893 punct (,box
R3833 T13893 T13876 parataxis box,signal
R3834 T13894 T13895 compound Fig.,1A
R3835 T13895 T13893 dep 1A,box
R3836 T13896 T13893 punct ", ",box
R3837 T13897 T13893 amod dashed,box
R3838 T13898 T13893 punct ),box
R3839 T13899 T13900 mark that,localizes
R3840 T13900 T13880 ccomp localizes,suggests
R3841 T13901 T13902 det the,protein
R3842 T13902 T13900 nsubj protein,localizes
R3843 T13903 T13904 compound mr,s
R3844 T13904 T13902 compound s,protein
R3845 T13905 T13904 punct -,s
R3846 T13906 T13900 prep in,localizes
R3847 T13907 T13908 det the,nucleus
R3848 T13908 T13906 pobj nucleus,in
R3849 T13909 T13880 punct .,suggests
R3850 T13911 T13912 aux To,determine
R3851 T13912 T13913 advcl determine,introduced
R3852 T13914 T13915 det the,localization
R3853 T13915 T13912 dobj localization,determine
R3854 T13916 T13915 amod subcellular,localization
R3855 T13917 T13915 prep of,localization
R3856 T13918 T13919 compound mr,s
R3857 T13919 T13917 pobj s,of
R3858 T13920 T13919 punct -,s
R3859 T13921 T13912 prep in,determine
R3860 T13922 T13923 amod mammalian,cells
R3861 T13923 T13921 pobj cells,in
R3862 T13924 T13913 punct ", ",introduced
R3863 T13925 T13913 nsubj we,introduced
R3864 T13926 T13927 det an,plasmid
R3865 T13927 T13913 dobj plasmid,introduced
R3866 T13928 T13929 npadvmod HA,tagged
R3867 T13929 T13927 amod tagged,plasmid
R3868 T13930 T13929 punct -,tagged
R3869 T13931 T13932 amod full,length
R3870 T13932 T13927 compound length,plasmid
R3871 T13933 T13932 punct -,length
R3872 T13934 T13935 compound mr,s
R3873 T13935 T13927 compound s,plasmid
R3874 T13936 T13935 punct -,s
R3875 T13937 T13913 prep into,introduced
R3876 T13938 T13939 compound HEK293T,cells
R3877 T13939 T13937 pobj cells,into
R3878 T13940 T13913 punct .,introduced
R3879 T13942 T13943 amod Confocal,microscopy
R3880 T13943 T13944 nsubj microscopy,showed
R3881 T13945 T13946 mark that,localized
R3882 T13946 T13944 ccomp localized,showed
R3883 T13947 T13948 det the,protein
R3884 T13948 T13946 nsubj protein,localized
R3885 T13949 T13950 compound mr,s
R3886 T13950 T13948 compound s,protein
R3887 T13951 T13950 punct -,s
R3888 T13952 T13953 advmod mainly,in
R3889 T13953 T13946 prep in,localized
R3890 T13954 T13955 det the,nucleus
R3891 T13955 T13953 pobj nucleus,in
R3892 T13956 T13955 prep of,nucleus
R3893 T13957 T13958 compound HEK293T,cells
R3894 T13958 T13956 pobj cells,of
R3895 T13959 T13960 punct (,B
R3896 T13960 T13944 parataxis B,showed
R3897 T13961 T13960 nmod Fig.,B
R3898 T13962 T13960 nmod 6A,B
R3899 T13963 T13960 punct ", ",B
R3900 T13964 T13960 punct ),B
R3901 T13965 T13944 punct .,showed
R3902 T13967 T13968 aux To,confirm
R3903 T13968 T13969 advcl confirm,co-immunostained
R3904 T13970 T13971 det the,localization
R3905 T13971 T13968 dobj localization,confirm
R3906 T13972 T13971 amod precise,localization
R3907 T13973 T13971 prep of,localization
R3908 T13974 T13975 det the,protein
R3909 T13975 T13973 pobj protein,of
R3910 T13976 T13977 compound mr,s
R3911 T13977 T13975 compound s,protein
R3912 T13978 T13977 punct -,s
R3913 T13979 T13969 punct ", ",co-immunostained
R3914 T13980 T13981 amod full,length
R3915 T13981 T13983 compound length,s
R3916 T13982 T13981 punct -,length
R3917 T13983 T13969 nsubjpass s,co-immunostained
R3918 T13984 T13983 compound mr,s
R3919 T13985 T13983 punct -,s
R3920 T13986 T13969 auxpass was,co-immunostained
R3921 T13987 T13969 prep with,co-immunostained
R3922 T13988 T13987 pobj DAPI,with
R3923 T13989 T13990 punct (,6C
R3924 T13990 T13969 parataxis 6C,co-immunostained
R3925 T13991 T13990 compound Fig.,6C
R3926 T13992 T13993 punct –,E
R3927 T13993 T13990 prep E,6C
R3928 T13994 T13990 punct ),6C
R3929 T13995 T13969 punct .,co-immunostained
R3930 T13997 T13998 det These,data
R3931 T13998 T13999 nsubj data,showed
R3932 T14000 T14001 mark that,localizes
R3933 T14001 T13999 ccomp localizes,showed
R3934 T14002 T14003 det the,protein
R3935 T14003 T14001 nsubj protein,localizes
R3936 T14004 T14005 compound mr,s
R3937 T14005 T14003 compound s,protein
R3938 T14006 T14005 punct -,s
R3939 T14007 T14001 advmod preferentially,localizes
R3940 T14008 T14001 prep to,localizes
R3941 T14009 T14010 det the,nucleus
R3942 T14010 T14008 pobj nucleus,to
R3943 T14011 T14001 prep in,localizes
R3944 T14012 T14013 amod mammalian,cells
R3945 T14013 T14011 pobj cells,in
R3946 T14014 T14001 punct ", ",localizes
R3947 T14015 T14001 advcl supporting,localizes
R3948 T14016 T14017 det the,idea
R3949 T14017 T14015 dobj idea,supporting
R3950 T14018 T14019 mark that,involved
R3951 T14019 T14017 acl involved,idea
R3952 T14020 T14021 det the,protein
R3953 T14021 T14019 nsubjpass protein,involved
R3954 T14022 T14023 compound mr,s
R3955 T14023 T14021 compound s,protein
R3956 T14024 T14023 punct -,s
R3957 T14025 T14019 auxpass is,involved
R3958 T14026 T14019 prep in,involved
R3959 T14027 T14028 amod transcriptional,regulation
R3960 T14028 T14026 pobj regulation,in
R3961 T14029 T14030 mark as,are
R3962 T14030 T14019 advcl are,involved
R3963 T14031 T14030 nsubj ph,are
R3964 T14032 T14031 cc and,ph
R3965 T14033 T14032 punct /,and
R3966 T14034 T14032 cc or,and
R3967 T14035 T14031 conj TEL,ph
R3968 T14036 T13999 punct .,showed