PMC:1435744 / 23272-24258
Annnotations
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12428 | 27-31 | PR_EXT:000014441 | denotes | mr-s |
| T12429 | 32-39 | CHEBI_PR_EXT:protein | denotes | protein |
| T12430 | 79-85 | SO_EXT:0000417 | denotes | domain |
| T12431 | 96-104 | GO_EXT:biological_direction_or_guidance | denotes | directed |
| T12432 | 105-114 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutations |
| T12433 | 141-147 | SO_EXT:0000417 | denotes | domain |
| T12434 | 151-155 | PR_EXT:000014441 | denotes | mr-s |
| T12435 | 181-190 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutations |
| T12436 | 191-196 | SO_EXT:sequence_alteration_process | denotes | alter |
| T12437 | 197-205 | CHEBI_EXT:residue | denotes | residues |
| T12438 | 215-224 | SO_EXT:biological_conservation_process_or_quality | denotes | conserved |
| T12439 | 236-242 | SO_EXT:0000417 | denotes | domain |
| T12440 | 290-299 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutations |
| T12441 | 341-348 | CHEMINF_GO_EXT:chemical_binding_or_bond_formation | denotes | binding |
| T12442 | 375-381 | SO_EXT:0000417 | denotes | domain |
| T12443 | 393-400 | CHEBI_PR_EXT:protein | denotes | protein |
| T12444 | 402-420 | PR_EXT:Q9VHA0 | denotes | Sex comb on midleg |
| T12445 | 422-425 | PR_EXT:Q9VHA0 | denotes | Scm |
| T12446 | 487-495 | GO_EXT:biological_direction_or_guidance | denotes | directed |
| T12447 | 496-505 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutations |
| T12448 | 531-540 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutations |
| T12449 | 558-565 | CHEBI_PR_EXT:protein | denotes | protein |
| T12450 | 577-583 | CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process | denotes | tagged |
| T12451 | 596-600 | PR_EXT:000014441 | denotes | mr-s |
| T12452 | 655-662 | CHEMINF_GO_EXT:chemical_binding_or_bond_formation | denotes | binding |
| T12453 | 713-720 | CHEMINF_GO_EXT:chemical_binding_or_bond_formation | denotes | binding |
| T12454 | 773-776 | PR_EXT:000014441 | denotes | mrs |
| T12455 | 817-822 | NCBITaxon_EXT:yeast | denotes | yeast |
| T12456 | 834-838 | PR_EXT:P04386 | denotes | GAL4 |
| T12457 | 864-868 | PR_EXT:000014441 | denotes | mr-s |
| T12458 | 869-876 | CHEBI_PR_EXT:protein | denotes | protein |
| T12459 | 918-924 | SO_EXT:0000417 | denotes | domain |
| T12460 | 948-958 | CHEBI_SO_EXT:N_terminus_or_N_terminal_region | denotes | N-terminus |
| T12461 | 979-985 | SO_EXT:0000417 | denotes | domain |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T12275 | 834-838 | PR:P04386 | denotes | GAL4 |
| T12276 | 864-868 | PR:000014441 | denotes | mr-s |
| T12277 | 918-924 | SO:0000417 | denotes | domain |
| T12278 | 979-985 | SO:0000417 | denotes | domain |
| T12265 | 27-31 | PR:000014441 | denotes | mr-s |
| T12266 | 79-85 | SO:0000417 | denotes | domain |
| T12267 | 141-147 | SO:0000417 | denotes | domain |
| T12268 | 151-155 | PR:000014441 | denotes | mr-s |
| T12269 | 236-242 | SO:0000417 | denotes | domain |
| T12270 | 375-381 | SO:0000417 | denotes | domain |
| T12271 | 402-420 | PR:Q9VHA0 | denotes | Sex comb on midleg |
| T12272 | 422-425 | PR:Q9VHA0 | denotes | Scm |
| T12273 | 596-600 | PR:000014441 | denotes | mr-s |
| T12274 | 773-776 | PR:000014441 | denotes | mrs |
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T13284 | 172-173 | -RRB- | denotes | ) |
| T13285 | 173-174 | . | denotes | . |
| T13286 | 174-432 | sentence | denotes | These mutations alter residues that are conserved in the SAM domain of ph and previous report indicates that these mutations of ph-SAM cause significant reduction in binding activity to the other SAM domain-containing protein, Sex comb on midleg (Scm) (41). |
| T13287 | 175-180 | DT | denotes | These |
| T13288 | 181-190 | NNS | denotes | mutations |
| T13289 | 191-196 | VBP | denotes | alter |
| T13290 | 197-205 | NNS | denotes | residues |
| T13291 | 206-210 | WDT | denotes | that |
| T13292 | 215-224 | VBN | denotes | conserved |
| T13293 | 211-214 | VBP | denotes | are |
| T13294 | 225-227 | IN | denotes | in |
| T13295 | 228-231 | DT | denotes | the |
| T13296 | 236-242 | NN | denotes | domain |
| T13297 | 232-235 | NN | denotes | SAM |
| T13298 | 243-245 | IN | denotes | of |
| T13299 | 246-248 | NN | denotes | ph |
| T13300 | 249-252 | CC | denotes | and |
| T13301 | 253-261 | JJ | denotes | previous |
| T13302 | 262-268 | NN | denotes | report |
| T13303 | 269-278 | VBZ | denotes | indicates |
| T13304 | 279-283 | IN | denotes | that |
| T13305 | 310-315 | VBP | denotes | cause |
| T13306 | 284-289 | DT | denotes | these |
| T13307 | 290-299 | NNS | denotes | mutations |
| T13308 | 300-302 | IN | denotes | of |
| T13309 | 303-305 | NN | denotes | ph |
| T13310 | 306-309 | NN | denotes | SAM |
| T13311 | 305-306 | HYPH | denotes | - |
| T13312 | 316-327 | JJ | denotes | significant |
| T13313 | 328-337 | NN | denotes | reduction |
| T13314 | 338-340 | IN | denotes | in |
| T13315 | 341-348 | NN | denotes | binding |
| T13316 | 349-357 | NN | denotes | activity |
| T13317 | 358-360 | IN | denotes | to |
| T13318 | 361-364 | DT | denotes | the |
| T13319 | 393-400 | NN | denotes | protein |
| T13320 | 365-370 | JJ | denotes | other |
| T13321 | 371-374 | NN | denotes | SAM |
| T13322 | 375-381 | NN | denotes | domain |
| T13323 | 382-392 | VBG | denotes | containing |
| T13324 | 381-382 | HYPH | denotes | - |
| T13325 | 400-402 | , | denotes | , |
| T13326 | 402-405 | NN | denotes | Sex |
| T13327 | 406-410 | NN | denotes | comb |
| T13328 | 411-413 | IN | denotes | on |
| T13329 | 414-420 | NN | denotes | midleg |
| T13330 | 421-422 | -LRB- | denotes | ( |
| T13331 | 422-425 | NN | denotes | Scm |
| T13332 | 425-426 | -RRB- | denotes | ) |
| T13333 | 427-428 | -LRB- | denotes | ( |
| T13334 | 428-430 | CD | denotes | 41 |
| T13335 | 430-431 | -RRB- | denotes | ) |
| T13336 | 431-432 | . | denotes | . |
| T13337 | 432-629 | sentence | denotes | Based on this result, we introduced two types of site-directed mutations, which correspond to the mutations introduced in ph protein, into Flag-tagged full-length mr-s (Flag-W404A and Flag-G453A). |
| T13338 | 433-438 | VBN | denotes | Based |
| T13339 | 458-468 | VBD | denotes | introduced |
| T13340 | 439-441 | IN | denotes | on |
| T13341 | 442-446 | DT | denotes | this |
| T13342 | 447-453 | NN | denotes | result |
| T13343 | 453-455 | , | denotes | , |
| T13344 | 455-457 | PRP | denotes | we |
| T13345 | 469-472 | CD | denotes | two |
| T13346 | 473-478 | NNS | denotes | types |
| T13347 | 479-481 | IN | denotes | of |
| T13348 | 482-486 | NN | denotes | site |
| T13349 | 487-495 | VBN | denotes | directed |
| T13350 | 486-487 | HYPH | denotes | - |
| T13351 | 496-505 | NNS | denotes | mutations |
| T13352 | 505-507 | , | denotes | , |
| T13353 | 507-512 | WDT | denotes | which |
| T13354 | 513-523 | VBP | denotes | correspond |
| T13355 | 524-526 | IN | denotes | to |
| T13356 | 527-530 | DT | denotes | the |
| T13357 | 531-540 | NNS | denotes | mutations |
| T13358 | 541-551 | VBN | denotes | introduced |
| T13359 | 552-554 | IN | denotes | in |
| T13360 | 555-557 | NN | denotes | ph |
| T13361 | 558-565 | NN | denotes | protein |
| T13362 | 565-567 | , | denotes | , |
| T13363 | 567-571 | IN | denotes | into |
| T13364 | 572-576 | NN | denotes | Flag |
| T13365 | 577-583 | VBN | denotes | tagged |
| T13366 | 576-577 | HYPH | denotes | - |
| T13367 | 599-600 | NN | denotes | s |
| T13368 | 584-588 | JJ | denotes | full |
| T13369 | 589-595 | NN | denotes | length |
| T13370 | 588-589 | HYPH | denotes | - |
| T13371 | 596-598 | NN | denotes | mr |
| T13372 | 598-599 | HYPH | denotes | - |
| T13373 | 601-602 | -LRB- | denotes | ( |
| T13374 | 602-606 | NN | denotes | Flag |
| T13375 | 607-612 | NN | denotes | W404A |
| T13376 | 606-607 | HYPH | denotes | - |
| T13377 | 613-616 | CC | denotes | and |
| T13378 | 617-621 | NN | denotes | Flag |
| T13379 | 622-627 | NN | denotes | G453A |
| T13380 | 621-622 | HYPH | denotes | - |
| T13381 | 627-628 | -RRB- | denotes | ) |
| T13382 | 628-629 | . | denotes | . |
| T13383 | 629-787 | sentence | denotes | We found that Flag-W404A binding activity was significantly reduced and Flag-G453A binding activity was also slightly reduced compared to Flag-mrs (Fig. 5C). |
| T13384 | 630-632 | PRP | denotes | We |
| T13385 | 633-638 | VBD | denotes | found |
| T13386 | 639-643 | IN | denotes | that |
| T13387 | 690-697 | VBN | denotes | reduced |
| T13388 | 644-648 | NN | denotes | Flag |
| T13389 | 649-654 | NN | denotes | W404A |
| T13390 | 648-649 | HYPH | denotes | - |
| T13391 | 655-662 | NN | denotes | binding |
| T13392 | 663-671 | NN | denotes | activity |
| T13393 | 672-675 | VBD | denotes | was |
| T13394 | 676-689 | RB | denotes | significantly |
| T13395 | 698-701 | CC | denotes | and |
| T13396 | 702-706 | NN | denotes | Flag |
| T13397 | 707-712 | NN | denotes | G453A |
| T13398 | 706-707 | HYPH | denotes | - |
| T13399 | 713-720 | NN | denotes | binding |
| T13400 | 721-729 | NN | denotes | activity |
| T13401 | 748-755 | VBN | denotes | reduced |
| T13402 | 730-733 | VBD | denotes | was |
| T13403 | 734-738 | RB | denotes | also |
| T13404 | 739-747 | RB | denotes | slightly |
| T13405 | 756-764 | VBN | denotes | compared |
| T13406 | 765-767 | IN | denotes | to |
| T13407 | 768-772 | NN | denotes | Flag |
| T13408 | 773-776 | NN | denotes | mrs |
| T13409 | 772-773 | HYPH | denotes | - |
| T13410 | 777-778 | -LRB- | denotes | ( |
| T13411 | 783-785 | NN | denotes | 5C |
| T13412 | 778-782 | NN | denotes | Fig. |
| T13413 | 785-786 | -RRB- | denotes | ) |
| T13414 | 786-787 | . | denotes | . |
| T13415 | 787-986 | sentence | denotes | These results, together with yeast two-hybrid GAL4 assay, indicate that the mr-s protein self-associates strongly through its SAM domain and weakly through the N-terminus portion lacking SAM domain. |
| T13416 | 788-793 | DT | denotes | These |
| T13417 | 794-801 | NNS | denotes | results |
| T13418 | 846-854 | VBP | denotes | indicate |
| T13419 | 801-803 | , | denotes | , |
| T13420 | 803-811 | RB | denotes | together |
| T13421 | 812-816 | IN | denotes | with |
| T13422 | 817-822 | NN | denotes | yeast |
| T13423 | 839-844 | NN | denotes | assay |
| T13424 | 823-826 | CD | denotes | two |
| T13425 | 827-833 | NN | denotes | hybrid |
| T13426 | 826-827 | HYPH | denotes | - |
| T13427 | 834-838 | NN | denotes | GAL4 |
| T13428 | 844-846 | , | denotes | , |
| T13429 | 855-859 | IN | denotes | that |
| T13430 | 882-892 | VBZ | denotes | associates |
| T13431 | 860-863 | DT | denotes | the |
| T13432 | 869-876 | NN | denotes | protein |
| T13433 | 864-866 | NN | denotes | mr |
| T13434 | 867-868 | NN | denotes | s |
| T13435 | 866-867 | HYPH | denotes | - |
| T13436 | 877-881 | NN | denotes | self |
| T13437 | 881-882 | HYPH | denotes | - |
| T13438 | 893-901 | RB | denotes | strongly |
| T13439 | 902-909 | IN | denotes | through |
| T13440 | 910-913 | PRP$ | denotes | its |
| T13441 | 918-924 | NN | denotes | domain |
| T13442 | 914-917 | NN | denotes | SAM |
| T13443 | 925-928 | CC | denotes | and |
| T13444 | 929-935 | RB | denotes | weakly |
| T13445 | 936-943 | IN | denotes | through |
| T13446 | 944-947 | DT | denotes | the |
| T13447 | 959-966 | NN | denotes | portion |
| T13448 | 948-949 | NN | denotes | N |
| T13449 | 950-958 | NN | denotes | terminus |
| T13450 | 949-950 | HYPH | denotes | - |
| T13451 | 967-974 | VBG | denotes | lacking |
| T13452 | 975-978 | NN | denotes | SAM |
| T13453 | 979-985 | NN | denotes | domain |
| T13454 | 985-986 | . | denotes | . |
| T13281 | 157-161 | NN | denotes | Fig. |
| T13282 | 162-164 | NN | denotes | 1B |
| T13283 | 164-166 | , | denotes | , |
| T13247 | 0-2 | TO | denotes | To |
| T13248 | 3-14 | VB | denotes | investigate |
| T13249 | 120-129 | VBN | denotes | generated |
| T13250 | 15-22 | IN | denotes | whether |
| T13251 | 45-55 | VBZ | denotes | associates |
| T13252 | 23-26 | DT | denotes | the |
| T13253 | 32-39 | NN | denotes | protein |
| T13254 | 27-29 | NN | denotes | mr |
| T13255 | 30-31 | NN | denotes | s |
| T13256 | 29-30 | HYPH | denotes | - |
| T13257 | 40-44 | NN | denotes | self |
| T13258 | 44-45 | HYPH | denotes | - |
| T13259 | 56-62 | RB | denotes | mainly |
| T13260 | 63-70 | IN | denotes | through |
| T13261 | 71-74 | DT | denotes | the |
| T13262 | 79-85 | NN | denotes | domain |
| T13263 | 75-78 | NN | denotes | SAM |
| T13264 | 85-87 | , | denotes | , |
| T13265 | 87-90 | CD | denotes | two |
| T13266 | 105-114 | NNS | denotes | mutations |
| T13267 | 91-95 | NN | denotes | site |
| T13268 | 96-104 | VBN | denotes | directed |
| T13269 | 95-96 | HYPH | denotes | - |
| T13270 | 115-119 | VBD | denotes | were |
| T13271 | 130-132 | IN | denotes | in |
| T13272 | 133-136 | DT | denotes | the |
| T13273 | 141-147 | NN | denotes | domain |
| T13274 | 137-140 | NN | denotes | SAM |
| T13275 | 148-150 | IN | denotes | of |
| T13276 | 151-153 | NN | denotes | mr |
| T13277 | 154-155 | NN | denotes | s |
| T13278 | 153-154 | HYPH | denotes | - |
| T13279 | 156-157 | -LRB- | denotes | ( |
| T13280 | 166-172 | NNS | denotes | arrows |
| R3591 | T13277 | T13275 | pobj | s,of |
| R3593 | T13278 | T13277 | punct | -,s |
| R3594 | T13279 | T13280 | punct | (,arrows |
| R3595 | T13280 | T13249 | parataxis | arrows,generated |
| R3596 | T13281 | T13282 | compound | Fig.,1B |
| R3597 | T13282 | T13280 | dep | 1B,arrows |
| R3599 | T13283 | T13280 | punct | ", ",arrows |
| R3602 | T13284 | T13280 | punct | ),arrows |
| R3604 | T13285 | T13249 | punct | .,generated |
| R3606 | T13287 | T13288 | det | These,mutations |
| R3607 | T13288 | T13289 | nsubj | mutations,alter |
| R3609 | T13290 | T13289 | dobj | residues,alter |
| R3610 | T13291 | T13292 | dep | that,conserved |
| R3612 | T13292 | T13290 | relcl | conserved,residues |
| R3613 | T13293 | T13292 | auxpass | are,conserved |
| R3614 | T13294 | T13292 | prep | in,conserved |
| R3616 | T13295 | T13296 | det | the,domain |
| R3617 | T13296 | T13294 | pobj | domain,in |
| R3618 | T13297 | T13296 | compound | SAM,domain |
| R3620 | T13298 | T13296 | prep | of,domain |
| R3621 | T13299 | T13298 | pobj | ph,of |
| R3622 | T13300 | T13289 | cc | and,alter |
| R3624 | T13301 | T13302 | amod | previous,report |
| R3625 | T13302 | T13303 | nsubj | report,indicates |
| R3626 | T13303 | T13289 | conj | indicates,alter |
| R3627 | T13304 | T13305 | mark | that,cause |
| R3629 | T13305 | T13303 | ccomp | cause,indicates |
| R3630 | T13306 | T13307 | det | these,mutations |
| R3632 | T13307 | T13305 | nsubj | mutations,cause |
| R3633 | T13308 | T13307 | prep | of,mutations |
| R3635 | T13309 | T13310 | compound | ph,SAM |
| R3636 | T13310 | T13308 | pobj | SAM,of |
| R3637 | T13311 | T13310 | punct | -,SAM |
| R3639 | T13312 | T13313 | amod | significant,reduction |
| R3640 | T13313 | T13305 | dobj | reduction,cause |
| R3641 | T13314 | T13313 | prep | in,reduction |
| R3643 | T13315 | T13316 | compound | binding,activity |
| R3644 | T13316 | T13314 | pobj | activity,in |
| R3645 | T13317 | T13316 | prep | to,activity |
| R3647 | T13318 | T13319 | det | the,protein |
| R3648 | T13319 | T13317 | pobj | protein,to |
| R3649 | T13320 | T13319 | amod | other,protein |
| R3650 | T13321 | T13322 | compound | SAM,domain |
| R3651 | T13322 | T13323 | npadvmod | domain,containing |
| R3653 | T13323 | T13319 | amod | containing,protein |
| R3654 | T13324 | T13323 | punct | -,containing |
| R3655 | T13325 | T13319 | punct | ", ",protein |
| R3656 | T13326 | T13327 | compound | Sex,comb |
| R3658 | T13327 | T13319 | appos | comb,protein |
| R3659 | T13328 | T13327 | prep | on,comb |
| R3660 | T13329 | T13328 | pobj | midleg,on |
| R3662 | T13330 | T13327 | punct | (,comb |
| R3663 | T13331 | T13327 | appos | Scm,comb |
| R3665 | T13332 | T13305 | punct | ),cause |
| R3666 | T13333 | T13334 | punct | (,41 |
| R3667 | T13334 | T13305 | parataxis | 41,cause |
| R3669 | T13335 | T13334 | punct | ),41 |
| R3670 | T13336 | T13303 | punct | .,indicates |
| R3672 | T13338 | T13339 | prep | Based,introduced |
| R3674 | T13340 | T13338 | prep | on,Based |
| R3675 | T13341 | T13342 | det | this,result |
| R3676 | T13342 | T13340 | pobj | result,on |
| R3678 | T13343 | T13339 | punct | ", ",introduced |
| R3679 | T13344 | T13339 | nsubj | we,introduced |
| R3680 | T13345 | T13346 | nummod | two,types |
| R3682 | T13346 | T13339 | dobj | types,introduced |
| R3683 | T13347 | T13346 | prep | of,types |
| R3684 | T13348 | T13349 | npadvmod | site,directed |
| R3686 | T13349 | T13351 | amod | directed,mutations |
| R3687 | T13350 | T13349 | punct | -,directed |
| R3689 | T13351 | T13347 | pobj | mutations,of |
| R3690 | T13352 | T13346 | punct | ", ",types |
| R3692 | T13353 | T13354 | dep | which,correspond |
| R3693 | T13354 | T13346 | relcl | correspond,types |
| R3694 | T13355 | T13354 | prep | to,correspond |
| R3696 | T13356 | T13357 | det | the,mutations |
| R3697 | T13357 | T13355 | pobj | mutations,to |
| R3698 | T13358 | T13357 | acl | introduced,mutations |
| R3700 | T13359 | T13358 | prep | in,introduced |
| R3701 | T13360 | T13361 | compound | ph,protein |
| R3702 | T13361 | T13359 | pobj | protein,in |
| R3704 | T13362 | T13358 | punct | ", ",introduced |
| R3706 | T13363 | T13358 | prep | into,introduced |
| R3707 | T13364 | T13365 | npadvmod | Flag,tagged |
| R3708 | T13365 | T13367 | amod | tagged,s |
| R3710 | T13366 | T13365 | punct | -,tagged |
| R3711 | T13367 | T13363 | pobj | s,into |
| R3713 | T13368 | T13369 | amod | full,length |
| R3714 | T13369 | T13367 | compound | length,s |
| R3715 | T13370 | T13369 | punct | -,length |
| R3717 | T13371 | T13367 | compound | mr,s |
| R3718 | T13372 | T13367 | punct | -,s |
| R3719 | T13373 | T13346 | punct | (,types |
| R3721 | T13374 | T13375 | compound | Flag,W404A |
| R3722 | T13375 | T13346 | appos | W404A,types |
| R3723 | T13376 | T13375 | punct | -,W404A |
| R3725 | T13377 | T13375 | cc | and,W404A |
| R3726 | T13378 | T13379 | compound | Flag,G453A |
| R3727 | T13379 | T13375 | conj | G453A,W404A |
| R3729 | T13380 | T13379 | punct | -,G453A |
| R3730 | T13381 | T13339 | punct | ),introduced |
| R3731 | T13382 | T13339 | punct | .,introduced |
| R3733 | T13384 | T13385 | nsubj | We,found |
| R3736 | T13386 | T13387 | mark | that,reduced |
| R3737 | T13387 | T13385 | ccomp | reduced,found |
| R3738 | T13388 | T13389 | compound | Flag,W404A |
| R3740 | T13389 | T13391 | compound | W404A,binding |
| R3741 | T13390 | T13389 | punct | -,W404A |
| R3742 | T13391 | T13392 | compound | binding,activity |
| R3743 | T13392 | T13387 | nsubjpass | activity,reduced |
| R3744 | T13393 | T13387 | auxpass | was,reduced |
| R3745 | T13394 | T13387 | advmod | significantly,reduced |
| R3746 | T13395 | T13385 | cc | and,found |
| R3747 | T13396 | T13397 | compound | Flag,G453A |
| R3748 | T13397 | T13399 | compound | G453A,binding |
| R3749 | T13398 | T13397 | punct | -,G453A |
| R3750 | T13399 | T13400 | compound | binding,activity |
| R3751 | T13400 | T13401 | nsubjpass | activity,reduced |
| R3752 | T13401 | T13385 | conj | reduced,found |
| R3753 | T13402 | T13401 | auxpass | was,reduced |
| R3754 | T13403 | T13401 | advmod | also,reduced |
| R3755 | T13404 | T13401 | advmod | slightly,reduced |
| R3756 | T13405 | T13401 | prep | compared,reduced |
| R3757 | T13406 | T13405 | prep | to,compared |
| R3758 | T13407 | T13408 | compound | Flag,mrs |
| R3759 | T13408 | T13406 | pobj | mrs,to |
| R3760 | T13409 | T13408 | punct | -,mrs |
| R3761 | T13410 | T13411 | punct | (,5C |
| R3762 | T13411 | T13401 | parataxis | 5C,reduced |
| R3763 | T13412 | T13411 | compound | Fig.,5C |
| R3764 | T13413 | T13411 | punct | ),5C |
| R3765 | T13414 | T13401 | punct | .,reduced |
| R3766 | T13416 | T13417 | det | These,results |
| R3767 | T13417 | T13418 | nsubj | results,indicate |
| R3768 | T13419 | T13418 | punct | ", ",indicate |
| R3769 | T13420 | T13418 | advmod | together,indicate |
| R3770 | T13421 | T13420 | prep | with,together |
| R3771 | T13422 | T13423 | nmod | yeast,assay |
| R3772 | T13423 | T13421 | pobj | assay,with |
| R3773 | T13424 | T13425 | nummod | two,hybrid |
| R3774 | T13425 | T13423 | compound | hybrid,assay |
| R3775 | T13426 | T13425 | punct | -,hybrid |
| R3776 | T13427 | T13423 | compound | GAL4,assay |
| R3777 | T13428 | T13418 | punct | ", ",indicate |
| R3778 | T13429 | T13430 | mark | that,associates |
| R3779 | T13430 | T13418 | ccomp | associates,indicate |
| R3780 | T13431 | T13432 | det | the,protein |
| R3781 | T13432 | T13430 | nsubj | protein,associates |
| R3782 | T13433 | T13434 | compound | mr,s |
| R3783 | T13434 | T13432 | compound | s,protein |
| R3784 | T13435 | T13434 | punct | -,s |
| R3785 | T13436 | T13430 | dep | self,associates |
| R3786 | T13437 | T13430 | punct | -,associates |
| R3787 | T13438 | T13430 | advmod | strongly,associates |
| R3788 | T13439 | T13430 | prep | through,associates |
| R3789 | T13440 | T13441 | poss | its,domain |
| R3790 | T13441 | T13439 | pobj | domain,through |
| R3791 | T13442 | T13441 | compound | SAM,domain |
| R3792 | T13443 | T13430 | cc | and,associates |
| R3793 | T13444 | T13430 | conj | weakly,associates |
| R3794 | T13445 | T13444 | prep | through,weakly |
| R3795 | T13446 | T13447 | det | the,portion |
| R3796 | T13447 | T13445 | pobj | portion,through |
| R3797 | T13448 | T13449 | compound | N,terminus |
| R3798 | T13449 | T13447 | compound | terminus,portion |
| R3799 | T13450 | T13449 | punct | -,terminus |
| R3800 | T13451 | T13447 | acl | lacking,portion |
| R3801 | T13452 | T13453 | compound | SAM,domain |
| R3802 | T13453 | T13451 | dobj | domain,lacking |
| R3803 | T13454 | T13418 | punct | .,indicate |
| R3549 | T13247 | T13248 | aux | To,investigate |
| R3551 | T13248 | T13249 | advcl | investigate,generated |
| R3553 | T13250 | T13251 | mark | whether,associates |
| R3554 | T13251 | T13248 | ccomp | associates,investigate |
| R3556 | T13252 | T13253 | det | the,protein |
| R3557 | T13253 | T13251 | nsubj | protein,associates |
| R3558 | T13254 | T13255 | compound | mr,s |
| R3560 | T13255 | T13253 | compound | s,protein |
| R3561 | T13256 | T13255 | punct | -,s |
| R3563 | T13257 | T13251 | dep | self,associates |
| R3564 | T13258 | T13251 | punct | -,associates |
| R3565 | T13259 | T13251 | advmod | mainly,associates |
| R3567 | T13260 | T13251 | prep | through,associates |
| R3568 | T13261 | T13262 | det | the,domain |
| R3569 | T13262 | T13260 | pobj | domain,through |
| R3571 | T13263 | T13262 | compound | SAM,domain |
| R3572 | T13264 | T13249 | punct | ", ",generated |
| R3574 | T13265 | T13266 | nummod | two,mutations |
| R3575 | T13266 | T13249 | nsubjpass | mutations,generated |
| R3576 | T13267 | T13268 | npadvmod | site,directed |
| R3578 | T13268 | T13266 | amod | directed,mutations |
| R3579 | T13269 | T13268 | punct | -,directed |
| R3580 | T13270 | T13249 | auxpass | were,generated |
| R3582 | T13271 | T13249 | prep | in,generated |
| R3583 | T13272 | T13273 | det | the,domain |
| R3584 | T13273 | T13271 | pobj | domain,in |
| R3586 | T13274 | T13273 | compound | SAM,domain |
| R3587 | T13275 | T13273 | prep | of,domain |
| R3588 | T13276 | T13277 | compound | mr,s |