PMC:1435744 / 142-652
Annnotations
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T827 | 26-33 | SO:0000417 | denotes | domains |
| T828 | 117-124 | SO:0000417 | denotes | modules |
| T829 | 131-137 | SO:0000417 | denotes | domain |
| T830 | 339-345 | SO:0000417 | denotes | domain |
| T831 | 389-398 | GO:0010467 | denotes | expressed |
| T832 | 402-409 | UBERON:0000966 | denotes | retinal |
| T833 | 402-424 | CL:0010009 | denotes | retinal photoreceptors |
| T834 | 433-445 | UBERON:0001905 | denotes | pineal gland |
| T835 | 464-469 | NCBITaxon:10088 | denotes | mouse |
| T836 | 470-474 | PR:000014441 | denotes | mr-s |
| T837 | 476-508 | PR:000014441 | denotes | major retinal SAM domain protein |
| T838 | 482-489 | UBERON:0000966 | denotes | retinal |
| T839 | 494-500 | SO:0000417 | denotes | domain |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T903 | 14-19 | SO_EXT:sequence_or_structure_motif | denotes | motif |
| T904 | 26-33 | SO_EXT:0000417 | denotes | domains |
| T905 | 42-50 | CHEBI_EXT:residue | denotes | residues |
| T906 | 89-96 | CHEBI_PR_EXT:protein | denotes | protein |
| T907 | 97-104 | CHEBI_PR_EXT:protein | denotes | protein |
| T908 | 117-124 | SO_EXT:0000417 | denotes | modules |
| T909 | 131-137 | SO_EXT:0000417 | denotes | domain |
| T910 | 168-176 | CHEBI_PR_EXT:protein | denotes | proteins |
| T911 | 209-217 | CHEBI_PR_EXT:protein | denotes | proteins |
| T912 | 233-246 | GO_EXT:transcription | denotes | transcription |
| T913 | 233-254 | GO_EXT:transcription_factor | denotes | transcription factors |
| T914 | 284-291 | SO_EXT:sequence_cloning_process | denotes | cloning |
| T915 | 339-345 | SO_EXT:0000417 | denotes | domain |
| T916 | 357-364 | CHEBI_PR_EXT:protein | denotes | protein |
| T917 | 389-398 | GO:0010467 | denotes | expressed |
| T918 | 402-409 | UBERON:0000966 | denotes | retinal |
| T919 | 402-424 | CL:0010009 | denotes | retinal photoreceptors |
| T920 | 433-445 | UBERON:0001905 | denotes | pineal gland |
| T921 | 464-469 | NCBITaxon:10088 | denotes | mouse |
| T922 | 470-474 | PR_EXT:000014441 | denotes | mr-s |
| T923 | 476-508 | PR_EXT:000014441 | denotes | major retinal SAM domain protein |
| T924 | 482-489 | UBERON:0000966 | denotes | retinal |
| T925 | 494-500 | SO_EXT:0000417 | denotes | domain |
| T926 | 501-508 | CHEBI_PR_EXT:protein | denotes | protein |
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T1028 | 0-7 | JJ | denotes | Sterile |
| T1029 | 14-19 | NN | denotes | motif |
| T1030 | 8-13 | NN | denotes | alpha |
| T1031 | 26-33 | NNS | denotes | domains |
| T1032 | 20-21 | -LRB- | denotes | ( |
| T1033 | 21-24 | NN | denotes | SAM |
| T1034 | 24-25 | -RRB- | denotes | ) |
| T1035 | 34-37 | VBP | denotes | are |
| T1036 | 38-39 | SYM | denotes | ~ |
| T1037 | 39-41 | CD | denotes | 70 |
| T1038 | 42-50 | NNS | denotes | residues |
| T1039 | 51-55 | JJ | denotes | long |
| T1040 | 56-59 | CC | denotes | and |
| T1041 | 60-64 | VBP | denotes | have |
| T1042 | 70-78 | VBN | denotes | reported |
| T1043 | 65-69 | VBN | denotes | been |
| T1044 | 79-81 | IN | denotes | as |
| T1045 | 82-88 | JJ | denotes | common |
| T1046 | 117-124 | NNS | denotes | modules |
| T1047 | 89-96 | NN | denotes | protein |
| T1048 | 97-104 | NN | denotes | protein |
| T1049 | 96-97 | HYPH | denotes | - |
| T1050 | 105-116 | NN | denotes | interaction |
| T1051 | 124-125 | . | denotes | . |
| T1052 | 125-255 | sentence | denotes | This domain is found in a large number of proteins, including Polycomb group (PcG) proteins and ETS family transcription factors. |
| T1053 | 126-130 | DT | denotes | This |
| T1054 | 131-137 | NN | denotes | domain |
| T1055 | 141-146 | VBN | denotes | found |
| T1056 | 138-140 | VBZ | denotes | is |
| T1057 | 147-149 | IN | denotes | in |
| T1058 | 150-151 | DT | denotes | a |
| T1059 | 158-164 | NN | denotes | number |
| T1060 | 152-157 | JJ | denotes | large |
| T1061 | 165-167 | IN | denotes | of |
| T1062 | 168-176 | NN | denotes | proteins |
| T1063 | 176-178 | , | denotes | , |
| T1064 | 178-187 | VBG | denotes | including |
| T1065 | 188-196 | NN | denotes | Polycomb |
| T1066 | 197-202 | NN | denotes | group |
| T1067 | 209-217 | NN | denotes | proteins |
| T1068 | 203-204 | -LRB- | denotes | ( |
| T1069 | 204-207 | NN | denotes | PcG |
| T1070 | 207-208 | -RRB- | denotes | ) |
| T1071 | 218-221 | CC | denotes | and |
| T1072 | 222-225 | NN | denotes | ETS |
| T1073 | 226-232 | NN | denotes | family |
| T1074 | 247-254 | NNS | denotes | factors |
| T1075 | 233-246 | NN | denotes | transcription |
| T1076 | 254-255 | . | denotes | . |
| T1077 | 255-510 | sentence | denotes | In this work, we report the cloning and functional characterization of a novel SAM domain-containing protein, which is predominantly expressed in retinal photoreceptors and the pineal gland and is designated mouse mr-s (major retinal SAM domain protein). |
| T1078 | 256-258 | IN | denotes | In |
| T1079 | 273-279 | VBP | denotes | report |
| T1080 | 259-263 | DT | denotes | this |
| T1081 | 264-268 | NN | denotes | work |
| T1082 | 268-270 | , | denotes | , |
| T1083 | 270-272 | PRP | denotes | we |
| T1084 | 280-283 | DT | denotes | the |
| T1085 | 284-291 | NN | denotes | cloning |
| T1086 | 292-295 | CC | denotes | and |
| T1087 | 296-306 | JJ | denotes | functional |
| T1088 | 307-323 | NN | denotes | characterization |
| T1089 | 324-326 | IN | denotes | of |
| T1090 | 327-328 | DT | denotes | a |
| T1091 | 357-364 | NN | denotes | protein |
| T1092 | 329-334 | JJ | denotes | novel |
| T1093 | 335-338 | NN | denotes | SAM |
| T1094 | 339-345 | NN | denotes | domain |
| T1095 | 346-356 | VBG | denotes | containing |
| T1096 | 345-346 | HYPH | denotes | - |
| T1097 | 364-366 | , | denotes | , |
| T1098 | 366-371 | WDT | denotes | which |
| T1099 | 389-398 | VBN | denotes | expressed |
| T1100 | 372-374 | VBZ | denotes | is |
| T1101 | 375-388 | RB | denotes | predominantly |
| T1102 | 399-401 | IN | denotes | in |
| T1103 | 402-409 | JJ | denotes | retinal |
| T1104 | 410-424 | NNS | denotes | photoreceptors |
| T1105 | 425-428 | CC | denotes | and |
| T1106 | 429-432 | DT | denotes | the |
| T1107 | 440-445 | NN | denotes | gland |
| T1108 | 433-439 | JJ | denotes | pineal |
| T1109 | 446-449 | CC | denotes | and |
| T1110 | 450-452 | VBZ | denotes | is |
| T1111 | 453-463 | VBN | denotes | designated |
| T1112 | 464-469 | NN | denotes | mouse |
| T1113 | 473-474 | NN | denotes | s |
| T1114 | 470-472 | NN | denotes | mr |
| T1115 | 472-473 | HYPH | denotes | - |
| T1116 | 475-476 | -LRB- | denotes | ( |
| T1117 | 501-508 | NN | denotes | protein |
| T1118 | 476-481 | JJ | denotes | major |
| T1119 | 482-489 | JJ | denotes | retinal |
| T1120 | 490-493 | NN | denotes | SAM |
| T1121 | 494-500 | NN | denotes | domain |
| T1122 | 508-509 | -RRB- | denotes | ) |
| T1123 | 509-510 | . | denotes | . |
| R21 | T1029 | T1031 | nmod | motif,domains |
| R22 | T1030 | T1029 | nmod | alpha,motif |
| R23 | T1031 | T1035 | nsubj | domains,are |
| R24 | T1032 | T1029 | punct | (,motif |
| R25 | T1033 | T1029 | appos | SAM,motif |
| R26 | T1034 | T1031 | punct | ),domains |
| R34 | T1043 | T1042 | auxpass | been,reported |
| R37 | T1046 | T1044 | pobj | modules,as |
| R38 | T1047 | T1048 | compound | protein,protein |
| R40 | T1049 | T1048 | punct | -,protein |
| R41 | T1050 | T1046 | compound | interaction,modules |
| R48 | T1059 | T1057 | pobj | number,in |
| R49 | T1060 | T1059 | amod | large,number |
| R56 | T1067 | T1064 | pobj | proteins,including |
| R57 | T1068 | T1066 | punct | (,group |
| R58 | T1069 | T1066 | appos | PcG,group |
| R59 | T1070 | T1067 | punct | ),proteins |
| R63 | T1074 | T1067 | conj | factors,proteins |
| R64 | T1075 | T1074 | compound | transcription,factors |
| R78 | T1091 | T1089 | pobj | protein,of |
| R79 | T1092 | T1091 | amod | novel,protein |
| R80 | T1093 | T1094 | compound | SAM,domain |
| R81 | T1094 | T1095 | npadvmod | domain,containing |
| R83 | T1096 | T1095 | punct | -,containing |
| R86 | T1099 | T1091 | relcl | expressed,protein |
| R87 | T1100 | T1099 | auxpass | is,expressed |
| R88 | T1101 | T1099 | advmod | predominantly,expressed |
| R94 | T1107 | T1104 | conj | gland,photoreceptors |
| R95 | T1108 | T1107 | amod | pineal,gland |
| R100 | T1113 | T1111 | oprd | s,designated |
| R101 | T1114 | T1113 | compound | mr,s |
| R102 | T1115 | T1113 | punct | -,s |
| R104 | T1117 | T1113 | parataxis | protein,s |
| R105 | T1118 | T1117 | amod | major,protein |
| R106 | T1119 | T1117 | amod | retinal,protein |
| R107 | T1120 | T1121 | compound | SAM,domain |
| R108 | T1121 | T1117 | compound | domain,protein |
| R51 | T1062 | T1061 | pobj | proteins,of |
| R20 | T1028 | T1029 | amod | Sterile,motif |
| R27 | T1036 | T1037 | punct | ~,70 |
| R28 | T1037 | T1038 | nummod | 70,residues |
| R29 | T1038 | T1039 | npadvmod | residues,long |
| R30 | T1039 | T1035 | acomp | long,are |
| R31 | T1040 | T1035 | cc | and,are |
| R32 | T1041 | T1042 | aux | have,reported |
| R35 | T1044 | T1042 | prep | as,reported |
| R36 | T1045 | T1046 | amod | common,modules |
| R39 | T1048 | T1050 | compound | protein,interaction |
| R42 | T1051 | T1035 | punct | .,are |
| R43 | T1053 | T1054 | det | This,domain |
| R44 | T1054 | T1055 | nsubjpass | domain,found |
| R45 | T1056 | T1055 | auxpass | is,found |
| R46 | T1057 | T1055 | prep | in,found |
| R47 | T1058 | T1059 | det | a,number |
| R50 | T1061 | T1059 | prep | of,number |
| R52 | T1063 | T1059 | punct | ", ",number |
| R53 | T1064 | T1059 | prep | including,number |
| R54 | T1065 | T1066 | nmod | Polycomb,group |
| R55 | T1066 | T1067 | nmod | group,proteins |
| R60 | T1071 | T1067 | cc | and,proteins |
| R61 | T1072 | T1073 | compound | ETS,family |
| R62 | T1073 | T1074 | compound | family,factors |
| R65 | T1076 | T1055 | punct | .,found |
| R66 | T1078 | T1079 | prep | In,report |
| R67 | T1080 | T1081 | det | this,work |
| R68 | T1081 | T1078 | pobj | work,In |
| R69 | T1082 | T1079 | punct | ", ",report |
| R70 | T1083 | T1079 | nsubj | we,report |
| R71 | T1084 | T1085 | det | the,cloning |
| R72 | T1085 | T1079 | dobj | cloning,report |
| R73 | T1086 | T1085 | cc | and,cloning |
| R74 | T1087 | T1088 | amod | functional,characterization |
| R75 | T1088 | T1085 | conj | characterization,cloning |
| R76 | T1089 | T1085 | prep | of,cloning |
| R77 | T1090 | T1091 | det | a,protein |
| R82 | T1095 | T1091 | amod | containing,protein |
| R84 | T1097 | T1091 | punct | ", ",protein |
| R85 | T1098 | T1099 | dep | which,expressed |
| R89 | T1102 | T1099 | prep | in,expressed |
| R90 | T1103 | T1104 | amod | retinal,photoreceptors |
| R91 | T1104 | T1102 | pobj | photoreceptors,in |
| R92 | T1105 | T1104 | cc | and,photoreceptors |
| R93 | T1106 | T1107 | det | the,gland |
| R96 | T1109 | T1099 | cc | and,expressed |
| R97 | T1110 | T1111 | auxpass | is,designated |
| R98 | T1111 | T1099 | conj | designated,expressed |
| R99 | T1112 | T1113 | compound | mouse,s |
| R103 | T1116 | T1117 | punct | (,protein |
| R109 | T1122 | T1117 | punct | ),protein |
| R110 | T1123 | T1079 | punct | .,report |
| R33 | T1042 | T1035 | conj | reported,are |