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PMC:1420314 / 87-1335 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T472 11-17 PR:000003710 denotes ADAM11
T473 42-46 SO:0000704 denotes gene
T474 68-77 GO:0010467 denotes expressed
T475 85-99 UBERON:0001016 denotes nervous system
T476 133-141 CHEBI:36357 denotes molecule
T477 211-217 GO:0031012 denotes matrix
T478 276-282 PR:000003710 denotes ADAM11
T479 297-303 PR:000003710 denotes ADAM11
T480 314-318 NCBITaxon:10088 denotes mice
T481 331-335 SO:0000704 denotes gene
T482 356-362 PR:000003710 denotes ADAM11
T483 373-377 NCBITaxon:10088 denotes mice
T484 482-487 UBERON:0000955 denotes brain
T485 491-502 UBERON:0002240 denotes spinal cord
T486 512-518 PR:000003710 denotes ADAM11
T487 529-538 GO:0010467 denotes expressed
T488 562-572 UBERON:0002037 denotes cerebellum
T489 591-597 PR:000003710 denotes ADAM11
T490 605-609 NCBITaxon:10088 denotes mice
T491 614-622 GO:0007612 denotes learning
T492 629-635 GO:0007601 denotes visual
T493 647-652 CHEBI:15377 denotes water
T494 751-757 GO:0007601 denotes visual
T495 758-763 CHEBI:15377 denotes water
T496 809-814 CHEBI:15377 denotes water
T497 865-871 PR:000003710 denotes ADAM11
T498 882-886 NCBITaxon:10088 denotes mice
T499 926-932 PR:000003710 denotes ADAM11
T500 958-972 GO:0016477 denotes cell migration
T501 958-962 _FRAGMENT denotes cell
T502 977-992 GO:0030154 denotes differentiation
T503 1025-1033 GO:0007612 denotes learning
T504 1064-1070 PR:000003710 denotes ADAM11
T505 1144-1152 CHEBI:36357 denotes molecule
T506 1160-1167 GO:0045202 denotes synapse
T507 1197-1205 GO:0045202 denotes synaptic
T508 1206-1216 GO:0065007 denotes regulation
R1 T502 T501 _lexicallyChainedTo differentiation,cell

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T513 11-17 PR_EXT:000003710 denotes ADAM11
T514 42-46 SO_EXT:0000704 denotes gene
T515 68-77 GO:0010467 denotes expressed
T516 85-99 UBERON:0001016 denotes nervous system
T517 124-132 GO_PATO_EXT:biological_adhesion_entity_or_process denotes adhesion
T518 133-141 CHEBI:36357 denotes molecule
T519 193-197 CL_GO_EXT:cell denotes cell
T520 198-202 CL_GO_EXT:cell denotes cell
T521 206-210 CL_GO_EXT:cell denotes cell
T522 211-217 GO:0031012 denotes matrix
T523 249-262 GO_PATO_EXT:physiological_process_or_quality denotes physiological
T524 276-282 PR_EXT:000003710 denotes ADAM11
T525 297-303 PR_EXT:000003710 denotes ADAM11
T526 314-318 NCBITaxon:10088 denotes mice
T527 331-335 SO_EXT:0000704 denotes gene
T528 356-362 PR_EXT:000003710 denotes ADAM11
T529 373-377 NCBITaxon:10088 denotes mice
T530 482-487 UBERON:0000955 denotes brain
T531 491-502 UBERON:0002240 denotes spinal cord
T532 512-518 PR_EXT:000003710 denotes ADAM11
T533 529-538 GO:0010467 denotes expressed
T534 546-557 UBERON_EXT:hippocampus_proper_or_hippocampal_formation denotes hippocampus
T535 562-572 UBERON:0002037 denotes cerebellum
T536 591-597 PR_EXT:000003710 denotes ADAM11
T537 598-604 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T538 605-609 NCBITaxon:10088 denotes mice
T539 614-622 GO:0007612 denotes learning
T540 629-635 GO:0007601 denotes visual
T541 647-652 CHEBI:15377 denotes water
T542 675-680 GO_EXT:biological_movement_or_translocation_process denotes motor
T543 751-757 GO:0007601 denotes visual
T544 758-763 CHEBI:15377 denotes water
T545 809-814 CHEBI:15377 denotes water
T546 865-871 PR_EXT:000003710 denotes ADAM11
T547 882-886 NCBITaxon:10088 denotes mice
T548 926-932 PR_EXT:000003710 denotes ADAM11
T549 933-941 SO_EXT:sequence_alteration_entity_or_process denotes mutation
T550 958-962 CL_GO_EXT:cell denotes cell
T551 958-972 GO:0016477 denotes cell migration
T552 958-962 _FRAGMENT denotes cell
T553 977-992 GO:0030154 denotes differentiation
T554 1025-1033 GO:0007612 denotes learning
T555 1038-1043 GO_EXT:biological_movement_or_translocation_process denotes motor
T556 1064-1070 PR_EXT:000003710 denotes ADAM11
T557 1095-1105 GO_EXT:cell_communication_or_signaling_or_signal_transduction denotes signalling
T558 1130-1134 CL_GO_EXT:cell denotes cell
T559 1135-1143 GO_PATO_EXT:biological_adhesion_entity_or_process denotes adhesion
T560 1144-1152 CHEBI:36357 denotes molecule
T561 1160-1167 GO:0045202 denotes synapse
T562 1197-1205 GO:0045202 denotes synaptic
T563 1206-1216 GO:0065007 denotes regulation
T564 1228-1239 GO_PATO_EXT:biological_behavior denotes behavioural
R2 T553 T552 _lexicallyChainedTo differentiation,cell

craft-sa-dev

Id Subject Object Predicate Lexical cue
T579 0-10 sentence denotes Background
T580 0-10 NN denotes Background
T581 10-100 sentence denotes ADAM11 is a member of the ADAM gene family and is mainly expressed in the nervous system.
T582 11-17 NN denotes ADAM11
T583 18-20 VBZ denotes is
T584 21-22 DT denotes a
T585 23-29 NN denotes member
T586 30-32 IN denotes of
T587 33-36 DT denotes the
T588 47-53 NN denotes family
T589 37-41 NN denotes ADAM
T590 42-46 NN denotes gene
T591 54-57 CC denotes and
T592 58-60 VBZ denotes is
T593 68-77 VBN denotes expressed
T594 61-67 RB denotes mainly
T595 78-80 IN denotes in
T596 81-84 DT denotes the
T597 93-99 NN denotes system
T598 85-92 JJ denotes nervous
T599 99-100 . denotes .
T600 100-231 sentence denotes It is thought to be an adhesion molecule, since it has a disintegrin-like domain related to cell-cell or cell-matrix interactions.
T601 101-103 PRP denotes It
T602 107-114 VBN denotes thought
T603 104-106 VBZ denotes is
T604 115-117 TO denotes to
T605 118-120 VB denotes be
T606 121-123 DT denotes an
T607 133-141 NN denotes molecule
T608 124-132 NN denotes adhesion
T609 141-143 , denotes ,
T610 143-148 IN denotes since
T611 152-155 VBZ denotes has
T612 149-151 PRP denotes it
T613 156-157 DT denotes a
T614 175-181 NN denotes domain
T615 158-169 NN denotes disintegrin
T616 170-174 JJ denotes like
T617 169-170 HYPH denotes -
T618 182-189 VBN denotes related
T619 190-192 IN denotes to
T620 193-197 NN denotes cell
T621 198-202 NN denotes cell
T622 197-198 SYM denotes -
T623 218-230 NNS denotes interactions
T624 203-205 CC denotes or
T625 206-210 NN denotes cell
T626 211-217 NN denotes matrix
T627 210-211 SYM denotes -
T628 230-231 . denotes .
T629 231-346 sentence denotes To elucidate the physiological functions of ADAM11, we generated ADAM11-deficient mice by means of gene targeting.
T630 232-234 TO denotes To
T631 235-244 VB denotes elucidate
T632 287-296 VBD denotes generated
T633 245-248 DT denotes the
T634 263-272 NNS denotes functions
T635 249-262 JJ denotes physiological
T636 273-275 IN denotes of
T637 276-282 NN denotes ADAM11
T638 282-284 , denotes ,
T639 284-286 PRP denotes we
T640 297-303 NN denotes ADAM11
T641 304-313 JJ denotes deficient
T642 303-304 HYPH denotes -
T643 314-318 NNS denotes mice
T644 319-321 IN denotes by
T645 322-327 NNS denotes means
T646 328-330 IN denotes of
T647 331-335 NN denotes gene
T648 336-345 NN denotes targeting
T649 345-346 . denotes .
T650 346-355 sentence denotes Results
T651 348-355 NNS denotes Results
T652 355-503 sentence denotes ADAM11-deficient mice were apparently normal, and survived more than one year with no major histological abnormalities in the brain or spinal cord.
T653 356-362 NN denotes ADAM11
T654 363-372 JJ denotes deficient
T655 362-363 HYPH denotes -
T656 373-377 NNS denotes mice
T657 378-382 VBD denotes were
T658 383-393 RB denotes apparently
T659 394-400 JJ denotes normal
T660 400-402 , denotes ,
T661 402-405 CC denotes and
T662 406-414 VBD denotes survived
T663 415-419 JJR denotes more
T664 425-428 CD denotes one
T665 420-424 IN denotes than
T666 429-433 NN denotes year
T667 434-438 IN denotes with
T668 439-441 DT denotes no
T669 461-474 NNS denotes abnormalities
T670 442-447 JJ denotes major
T671 448-460 JJ denotes histological
T672 475-477 IN denotes in
T673 478-481 DT denotes the
T674 482-487 NN denotes brain
T675 488-490 CC denotes or
T676 491-497 JJ denotes spinal
T677 498-502 NN denotes cord
T678 502-503 . denotes .
T679 503-720 sentence denotes Because ADAM11 is highly expressed in the hippocampus and cerebellum, we have examined ADAM11 mutant mice for learning using visual and hidden water maze tasks, and their motor coordination using a rotating rod task.
T680 504-511 IN denotes Because
T681 519-521 VBZ denotes is
T682 512-518 NN denotes ADAM11
T683 582-590 VBN denotes examined
T684 522-528 RB denotes highly
T685 529-538 VBN denotes expressed
T686 539-541 IN denotes in
T687 542-545 DT denotes the
T688 546-557 NN denotes hippocampus
T689 558-561 CC denotes and
T690 562-572 NN denotes cerebellum
T691 572-574 , denotes ,
T692 574-576 PRP denotes we
T693 577-581 VBP denotes have
T694 591-597 NN denotes ADAM11
T695 605-609 NNS denotes mice
T696 598-604 NN denotes mutant
T697 610-613 IN denotes for
T698 614-622 VBG denotes learning
T699 623-628 VBG denotes using
T700 629-635 JJ denotes visual
T701 658-663 NNS denotes tasks
T702 636-639 CC denotes and
T703 640-646 JJ denotes hidden
T704 647-652 NN denotes water
T705 653-657 NN denotes maze
T706 663-665 , denotes ,
T707 665-668 CC denotes and
T708 669-674 PRP$ denotes their
T709 681-693 NN denotes coordination
T710 675-680 JJ denotes motor
T711 694-699 VBG denotes using
T712 700-701 DT denotes a
T713 715-719 NN denotes task
T714 702-710 VBG denotes rotating
T715 711-714 NN denotes rod
T716 719-720 . denotes .
T717 720-887 sentence denotes Our results showed that their visual water maze task results are normal, but the hidden water maze and rotating rod task skills are impaired in ADAM11-deficient mice.
T718 721-724 PRP$ denotes Our
T719 725-732 NNS denotes results
T720 733-739 VBD denotes showed
T721 740-744 IN denotes that
T722 782-785 VBP denotes are
T723 745-750 PRP$ denotes their
T724 774-781 NNS denotes results
T725 751-757 JJ denotes visual
T726 764-768 NN denotes maze
T727 758-763 NN denotes water
T728 769-773 NN denotes task
T729 786-792 JJ denotes normal
T730 792-794 , denotes ,
T731 794-797 CC denotes but
T732 798-801 DT denotes the
T733 842-848 NNS denotes skills
T734 802-808 JJ denotes hidden
T735 815-819 NN denotes maze
T736 809-814 NN denotes water
T737 837-841 NN denotes task
T738 820-823 CC denotes and
T739 824-832 VBG denotes rotating
T740 833-836 NN denotes rod
T741 849-852 VBP denotes are
T742 853-861 JJ denotes impaired
T743 862-864 IN denotes in
T744 865-871 NN denotes ADAM11
T745 872-881 JJ denotes deficient
T746 871-872 HYPH denotes -
T747 882-886 NNS denotes mice
T748 886-887 . denotes .
T749 887-899 sentence denotes Conclusion
T750 889-899 NN denotes Conclusion
T751 899-1057 sentence denotes Our results indicate that ADAM11 mutation does not affect cell migration and differentiation during development, but affects learning and motor coordination.
T752 900-903 PRP$ denotes Our
T753 904-911 NNS denotes results
T754 912-920 VBP denotes indicate
T755 921-925 IN denotes that
T756 951-957 VB denotes affect
T757 926-932 NN denotes ADAM11
T758 933-941 NN denotes mutation
T759 942-946 VBZ denotes does
T760 947-950 RB denotes not
T761 958-962 NN denotes cell
T762 963-972 NN denotes migration
T763 973-976 CC denotes and
T764 977-992 NN denotes differentiation
T765 993-999 IN denotes during
T766 1000-1011 NN denotes development
T767 1011-1013 , denotes ,
T768 1013-1016 CC denotes but
T769 1017-1024 VBZ denotes affects
T770 1025-1033 NN denotes learning
T771 1034-1037 CC denotes and
T772 1038-1043 NN denotes motor
T773 1044-1056 NN denotes coordination
T774 1056-1057 . denotes .
T775 1057-1248 sentence denotes Thus, ADAM11 might play an important signalling or structural role as a cell adhesion molecule at the synapse, and may thus participate in synaptic regulation underlying behavioural changes.
T776 1058-1062 RB denotes Thus
T777 1077-1081 VB denotes play
T778 1062-1064 , denotes ,
T779 1064-1070 NN denotes ADAM11
T780 1071-1076 MD denotes might
T781 1082-1084 DT denotes an
T782 1120-1124 NN denotes role
T783 1085-1094 JJ denotes important
T784 1095-1105 NN denotes signalling
T785 1106-1108 CC denotes or
T786 1109-1119 JJ denotes structural
T787 1125-1127 IN denotes as
T788 1128-1129 DT denotes a
T789 1144-1152 NN denotes molecule
T790 1130-1134 NN denotes cell
T791 1135-1143 NN denotes adhesion
T792 1153-1155 IN denotes at
T793 1156-1159 DT denotes the
T794 1160-1167 NN denotes synapse
T795 1167-1169 , denotes ,
T796 1169-1172 CC denotes and
T797 1173-1176 MD denotes may
T798 1182-1193 VB denotes participate
T799 1177-1181 RB denotes thus
T800 1194-1196 IN denotes in
T801 1197-1205 JJ denotes synaptic
T802 1206-1216 NN denotes regulation
T803 1217-1227 VBG denotes underlying
T804 1228-1239 JJ denotes behavioural
T805 1240-1247 NNS denotes changes
T806 1247-1248 . denotes .
R13 T582 T583 nsubj ADAM11,is
R14 T584 T585 det a,member
R15 T585 T583 attr member,is
R16 T586 T585 prep of,member
R17 T587 T588 det the,family
R18 T588 T586 pobj family,of
R19 T589 T588 compound ADAM,family
R20 T590 T588 compound gene,family
R21 T591 T583 cc and,is
R22 T592 T593 auxpass is,expressed
R24 T594 T593 advmod mainly,expressed
R25 T595 T593 prep in,expressed
R26 T596 T597 det the,system
R28 T598 T597 amod nervous,system
R29 T599 T583 punct .,is
R30 T601 T602 nsubjpass It,thought
R31 T603 T602 auxpass is,thought
R32 T604 T605 aux to,be
R33 T605 T602 xcomp be,thought
R34 T606 T607 det an,molecule
R36 T608 T607 compound adhesion,molecule
R37 T609 T602 punct ", ",thought
R38 T610 T611 mark since,has
R40 T612 T611 nsubj it,has
R41 T613 T614 det a,domain
R42 T614 T611 dobj domain,has
R43 T615 T616 npadvmod disintegrin,like
R44 T616 T614 amod like,domain
R45 T617 T616 punct -,like
R46 T618 T614 prep related,domain
R47 T619 T618 prep to,related
R48 T620 T621 nmod cell,cell
R50 T622 T621 punct -,cell
R51 T623 T619 pobj interactions,to
R52 T624 T621 cc or,cell
R53 T625 T626 nmod cell,matrix
R54 T626 T621 conj matrix,cell
R55 T627 T626 punct -,matrix
R56 T628 T602 punct .,thought
R57 T630 T631 aux To,elucidate
R58 T631 T632 advcl elucidate,generated
R59 T633 T634 det the,functions
R61 T635 T634 amod physiological,functions
R62 T636 T634 prep of,functions
R63 T637 T636 pobj ADAM11,of
R64 T638 T632 punct ", ",generated
R65 T639 T632 nsubj we,generated
R66 T640 T641 npadvmod ADAM11,deficient
R68 T642 T641 punct -,deficient
R69 T643 T632 dobj mice,generated
R70 T644 T632 prep by,generated
R71 T645 T644 pobj means,by
R72 T646 T645 prep of,means
R73 T647 T648 compound gene,targeting
R74 T648 T646 pobj targeting,of
R75 T649 T632 punct .,generated
R76 T653 T654 npadvmod ADAM11,deficient
R78 T655 T654 punct -,deficient
R79 T656 T657 nsubj mice,were
R80 T658 T657 advmod apparently,were
R81 T659 T657 acomp normal,were
R82 T660 T657 punct ", ",were
R83 T661 T657 cc and,were
R84 T662 T657 conj survived,were
R85 T663 T664 amod more,one
R87 T665 T664 quantmod than,one
R88 T666 T662 npadvmod year,survived
R89 T667 T662 prep with,survived
R90 T668 T669 det no,abnormalities
R91 T669 T667 pobj abnormalities,with
R92 T670 T669 amod major,abnormalities
R93 T671 T669 amod histological,abnormalities
R94 T672 T669 prep in,abnormalities
R95 T673 T674 det the,brain
R96 T674 T672 pobj brain,in
R97 T675 T674 cc or,brain
R98 T676 T677 amod spinal,cord
R99 T677 T674 conj cord,brain
R100 T678 T657 punct .,were
R101 T680 T681 mark Because,is
R103 T682 T681 nsubj ADAM11,is
R104 T684 T685 advmod highly,expressed
R105 T685 T681 acomp expressed,is
R106 T686 T681 prep in,is
R107 T687 T688 det the,hippocampus
R108 T688 T686 pobj hippocampus,in
R109 T689 T688 cc and,hippocampus
R110 T690 T688 conj cerebellum,hippocampus
R111 T691 T683 punct ", ",examined
R112 T692 T683 nsubj we,examined
R113 T693 T683 aux have,examined
R114 T694 T695 compound ADAM11,mice
R116 T696 T695 compound mutant,mice
R117 T697 T683 prep for,examined
R118 T698 T697 pobj learning,for
R119 T699 T683 advcl using,examined
R120 T700 T701 amod visual,tasks
R121 T701 T699 dobj tasks,using
R122 T702 T700 cc and,visual
R123 T703 T700 conj hidden,visual
R124 T704 T705 compound water,maze
R125 T705 T701 compound maze,tasks
R126 T706 T683 punct ", ",examined
R127 T707 T683 cc and,examined
R128 T708 T709 poss their,coordination
R130 T710 T709 amod motor,coordination
R131 T711 T709 advcl using,coordination
R132 T712 T713 det a,task
R133 T713 T711 dobj task,using
R134 T714 T715 amod rotating,rod
R135 T715 T713 compound rod,task
R136 T716 T683 punct .,examined
R137 T718 T719 poss Our,results
R138 T719 T720 nsubj results,showed
R139 T721 T722 mark that,are
R140 T722 T720 ccomp are,showed
R141 T723 T724 poss their,results
R142 T724 T722 nsubj results,are
R143 T725 T726 amod visual,maze
R144 T726 T728 compound maze,task
R145 T727 T726 compound water,maze
R146 T728 T724 compound task,results
R147 T729 T722 acomp normal,are
R148 T730 T720 punct ", ",showed
R149 T731 T720 cc but,showed
R150 T732 T733 det the,skills
R151 T733 T741 nsubj skills,are
R152 T734 T735 amod hidden,maze
R153 T735 T737 nmod maze,task
R154 T736 T735 nmod water,maze
R155 T737 T733 compound task,skills
R156 T738 T735 cc and,maze
R157 T739 T740 amod rotating,rod
R158 T740 T735 conj rod,maze
R159 T741 T720 conj are,showed
R160 T742 T741 acomp impaired,are
R161 T743 T741 prep in,are
R162 T744 T745 npadvmod ADAM11,deficient
R164 T746 T745 punct -,deficient
R165 T747 T743 pobj mice,in
R166 T748 T741 punct .,are
R167 T752 T753 poss Our,results
R168 T753 T754 nsubj results,indicate
R169 T755 T756 mark that,affect
R170 T756 T754 ccomp affect,indicate
R171 T757 T758 compound ADAM11,mutation
R172 T758 T756 nsubj mutation,affect
R173 T759 T756 aux does,affect
R174 T760 T756 neg not,affect
R175 T761 T762 compound cell,migration
R176 T762 T756 dobj migration,affect
R177 T763 T762 cc and,migration
R178 T764 T762 conj differentiation,migration
R179 T765 T756 prep during,affect
R180 T766 T765 pobj development,during
R181 T767 T756 punct ", ",affect
R182 T768 T756 cc but,affect
R183 T769 T756 conj affects,affect
R184 T770 T769 dobj learning,affects
R185 T771 T770 cc and,learning
R186 T772 T773 compound motor,coordination
R187 T773 T770 conj coordination,learning
R188 T774 T754 punct .,indicate
R189 T776 T777 advmod Thus,play
R190 T778 T777 punct ", ",play
R191 T779 T777 nsubj ADAM11,play
R192 T780 T777 aux might,play
R193 T781 T782 det an,role
R194 T782 T777 dobj role,play
R195 T783 T782 amod important,role
R196 T784 T782 nmod signalling,role
R197 T785 T784 cc or,signalling
R198 T786 T784 conj structural,signalling
R199 T787 T782 prep as,role
R200 T788 T789 det a,molecule
R201 T789 T787 pobj molecule,as
R202 T790 T791 compound cell,adhesion
R203 T791 T789 compound adhesion,molecule
R204 T792 T782 prep at,role
R205 T793 T794 det the,synapse
R206 T794 T792 pobj synapse,at
R207 T795 T777 punct ", ",play
R208 T796 T777 cc and,play
R209 T797 T798 aux may,participate
R211 T799 T798 advmod thus,participate
R212 T800 T798 prep in,participate
R213 T801 T802 amod synaptic,regulation
R214 T802 T800 pobj regulation,in
R215 T803 T802 acl underlying,regulation
R216 T804 T805 amod behavioural,changes
R217 T805 T803 dobj changes,underlying
R218 T806 T777 punct .,play
R23 T593 T583 conj expressed,is
R27 T597 T595 pobj system,in
R35 T607 T605 attr molecule,be
R39 T611 T602 advcl has,thought
R49 T621 T623 nmod cell,interactions
R60 T634 T631 dobj functions,elucidate
R67 T641 T643 amod deficient,mice
R77 T654 T656 amod deficient,mice
R86 T664 T666 nummod one,year
R102 T681 T683 advcl is,examined
R115 T695 T683 dobj mice,examined
R129 T709 T683 conj coordination,examined
R163 T745 T747 amod deficient,mice
R210 T798 T777 conj participate,play