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PMC:1420314 / 19669-19889 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12965 18-28 UBERON:0002037 denotes cerebellum
T12966 63-68 NCBITaxon:10088 denotes mouse
T12967 105-115 GO:0019835 denotes cell lysis
T12968 130-134 CHEBI:9754 denotes Tris
T12969 135-138 CHEBI:17883 denotes HCl
T12970 155-159 CHEBI:26710 denotes NaCl
T12971 164-169 CHEBI:63016 denotes NP-40
T12972 190-198 CHEBI:60004 denotes cocktail

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12985 18-28 UBERON:0002037 denotes cerebellum
T12986 63-68 NCBITaxon:10088 denotes mouse
T12987 77-85 SO_EXT:genotype_or_entity_with_genotype denotes genotype
T12988 105-109 CL_GO_EXT:cell denotes cell
T12989 105-115 GO:0019835 denotes cell lysis
T12990 116-122 CHEBI_CHMO_EXT:buffer_solution denotes buffer
T12991 130-134 CHEBI:9754 denotes Tris
T12992 135-138 CHEBI:17883 denotes HCl
T12993 155-159 CHEBI:26710 denotes NaCl
T12994 164-169 CHEBI:63016 denotes NP-40
T12995 171-189 CHEBI_GO_EXT:peptidase_or_protease_or_proteinase_inhibitor denotes protease inhibitor
T12996 190-198 CHEBI:60004 denotes cocktail

craft-sa-dev

Id Subject Object Predicate Lexical cue
T13035 0-220 sentence denotes To be brief, the cerebellum was isolated from a six month-old mouse of each genotype and homogenised in cell lysis buffer (50 mM Tris-HCl, pH 7.5, 100 mM NaCl, 1% NP-40, protease inhibitor cocktail [Roche Diagnostics]).
T13036 1-3 TO denotes To
T13037 4-6 VB denotes be
T13038 33-41 VBN denotes isolated
T13039 7-12 JJ denotes brief
T13040 12-14 , denotes ,
T13041 14-17 DT denotes the
T13042 18-28 NN denotes cerebellum
T13043 29-32 VBD denotes was
T13044 42-46 IN denotes from
T13045 47-48 DT denotes a
T13046 63-68 NN denotes mouse
T13047 49-52 CD denotes six
T13048 53-58 NN denotes month
T13049 59-62 JJ denotes old
T13050 58-59 HYPH denotes -
T13051 69-71 IN denotes of
T13052 72-76 DT denotes each
T13053 77-85 NN denotes genotype
T13054 86-89 CC denotes and
T13055 90-101 VBN denotes homogenised
T13056 102-104 IN denotes in
T13057 105-109 NN denotes cell
T13058 110-115 NN denotes lysis
T13059 116-122 NN denotes buffer
T13060 123-124 -LRB- denotes (
T13061 190-198 NN denotes cocktail
T13062 124-126 CD denotes 50
T13063 127-129 NN denotes mM
T13064 135-138 NN denotes HCl
T13065 130-134 NN denotes Tris
T13066 134-135 HYPH denotes -
T13067 138-140 , denotes ,
T13068 140-142 NN denotes pH
T13069 143-146 CD denotes 7.5
T13070 146-148 , denotes ,
T13071 148-151 CD denotes 100
T13072 152-154 NN denotes mM
T13073 155-159 NN denotes NaCl
T13074 159-161 , denotes ,
T13075 161-162 CD denotes 1
T13076 162-163 NN denotes %
T13077 164-166 NN denotes NP
T13078 166-167 HYPH denotes -
T13079 167-169 CD denotes 40
T13080 169-171 , denotes ,
T13081 171-179 NN denotes protease
T13082 180-189 NN denotes inhibitor
T13083 199-200 -LRB- denotes [
T13084 206-217 NNP denotes Diagnostics
T13085 200-205 NNP denotes Roche
T13086 217-218 -RRB- denotes ]
T13087 218-219 -RRB- denotes )
T13088 219-220 . denotes .
R3859 T13036 T13037 aux To,be
R3860 T13037 T13038 advcl be,isolated
R3861 T13039 T13037 acomp brief,be
R3862 T13040 T13038 punct ", ",isolated
R3863 T13041 T13042 det the,cerebellum
R3864 T13042 T13038 nsubjpass cerebellum,isolated
R3865 T13043 T13038 auxpass was,isolated
R3866 T13044 T13038 prep from,isolated
R3867 T13045 T13046 det a,mouse
R3868 T13046 T13044 pobj mouse,from
R3869 T13047 T13048 nummod six,month
R3870 T13048 T13049 npadvmod month,old
R3871 T13049 T13046 amod old,mouse
R3872 T13050 T13049 punct -,old
R3873 T13051 T13046 prep of,mouse
R3874 T13052 T13053 det each,genotype
R3875 T13053 T13051 pobj genotype,of
R3876 T13054 T13038 cc and,isolated
R3877 T13055 T13038 conj homogenised,isolated
R3878 T13056 T13055 prep in,homogenised
R3879 T13057 T13058 compound cell,lysis
R3880 T13058 T13059 compound lysis,buffer
R3881 T13059 T13056 pobj buffer,in
R3882 T13060 T13061 punct (,cocktail
R3883 T13061 T13055 parataxis cocktail,homogenised
R3884 T13062 T13063 nummod 50,mM
R3885 T13063 T13064 compound mM,HCl
R3886 T13064 T13061 dep HCl,cocktail
R3887 T13065 T13064 compound Tris,HCl
R3888 T13066 T13064 punct -,HCl
R3889 T13067 T13061 punct ", ",cocktail
R3890 T13068 T13061 dep pH,cocktail
R3891 T13069 T13068 nummod 7.5,pH
R3892 T13070 T13061 punct ", ",cocktail
R3893 T13071 T13072 nummod 100,mM
R3894 T13072 T13073 compound mM,NaCl
R3895 T13073 T13061 dep NaCl,cocktail
R3896 T13074 T13061 punct ", ",cocktail
R3897 T13075 T13076 nummod 1,%
R3898 T13076 T13077 compound %,NP
R3899 T13077 T13061 dep NP,cocktail
R3900 T13078 T13077 punct -,NP
R3901 T13079 T13077 nummod 40,NP
R3902 T13080 T13061 punct ", ",cocktail
R3903 T13081 T13082 compound protease,inhibitor
R3904 T13082 T13061 compound inhibitor,cocktail
R3905 T13083 T13084 punct [,Diagnostics
R3906 T13084 T13061 parataxis Diagnostics,cocktail
R3907 T13085 T13084 compound Roche,Diagnostics
R3908 T13086 T13084 punct ],Diagnostics
R3909 T13087 T13061 punct ),cocktail
R3910 T13088 T13038 punct .,isolated