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PMC:1420271 / 6770-7169 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12236 10-13 SO:0000153 denotes BAC
T12237 36-40 PR:000006847 denotes ESG1
T12238 41-45 SO:0000704 denotes gene
T12239 64-74 SO:0000336 denotes pseudogene
T12240 76-78 SO:0000336 denotes PS
T12241 104-108 SO:0000704 denotes gene
T12242 113-115 SO:0000336 denotes PS
T12243 163-167 SO:0000704 denotes gene
T12244 172-174 SO:0000336 denotes PS
T12245 199-209 SO:0000857 denotes homologous
T12246 221-231 SO:0000028 denotes base pairs
T12247 254-258 SO:0000147 denotes exon
T12248 266-268 SO:0000028 denotes bp
T12249 293-297 SO:0000147 denotes exon

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12250 10-13 SO_EXT:0000153 denotes BAC
T12251 14-20 SO_EXT:sequence_cloned_entity denotes clones
T12252 36-40 PR_EXT:000006847 denotes ESG1
T12253 41-45 SO_EXT:0000704 denotes gene
T12254 52-63 SO_EXT:sequence_duplication_entity_or_process denotes duplication
T12255 64-74 SO_EXT:0000336 denotes pseudogene
T12256 76-78 SO_EXT:0000336 denotes PS
T12257 84-96 GO_PATO_EXT:biological_localization_process_or_quality denotes Localization
T12258 104-108 SO_EXT:0000704 denotes gene
T12259 113-115 SO_EXT:0000336 denotes PS
T12260 119-129 GO_SO_EXT:chromosome denotes chromosome
T12261 136-144 SO_EXT:biological_sequence denotes Sequence
T12262 163-167 SO_EXT:0000704 denotes gene
T12263 172-174 SO_EXT:0000336 denotes PS
T12264 199-209 SO:0000857 denotes homologous
T12265 221-225 CHEBI_SO_EXT:base denotes base
T12266 221-231 SO_EXT:0000028 denotes base pairs
T12267 232-240 SO_EXT:sequence_upstreamness denotes upstream
T12268 254-258 SO_EXT:0000147 denotes exon
T12269 266-268 SO_EXT:0000028 denotes bp
T12270 269-279 SO_EXT:sequence_downstreamness denotes downstream
T12271 293-297 SO_EXT:0000147 denotes exon
T12272 299-311 SO_EXT:sequence_substitution_entity_or_process denotes Substitution
T12273 312-321 SO_EXT:sequence_alteration_entity_or_process denotes mutations
T12274 356-365 SO_EXT:sequence_insertion_entity_or_process denotes insertion

craft-sa-dev

Id Subject Object Predicate Lexical cue
T12275 10-13 NN denotes BAC
T12276 14-20 NNS denotes clones
T12277 21-31 VBG denotes containing
T12278 32-35 DT denotes the
T12279 41-45 NN denotes gene
T12280 36-40 NN denotes ESG1
T12281 46-49 CC denotes and
T12282 50-51 DT denotes a
T12283 64-74 NN denotes pseudogene
T12284 52-63 NN denotes duplication
T12285 75-76 -LRB- denotes (
T12286 76-78 NN denotes PS
T12287 78-79 -RRB- denotes )
T12288 79-80 . denotes .
T12289 80-132 sentence denotes A) Localization of the gene and PS on chromosome 9.
T12290 81-82 LS denotes A
T12291 84-96 NN denotes Localization
T12292 82-83 -RRB- denotes )
T12293 97-99 IN denotes of
T12294 100-103 DT denotes the
T12295 104-108 NN denotes gene
T12296 109-112 CC denotes and
T12297 113-115 NN denotes PS
T12298 116-118 IN denotes on
T12299 119-129 NN denotes chromosome
T12300 130-131 CD denotes 9
T12301 131-132 . denotes .
T12302 132-298 sentence denotes B) Sequence comparison of the gene and PS revealed that these are homologous from eight base pairs upstream of the first exon to 675 bp downstream of the third exon.
T12303 133-134 LS denotes B
T12304 175-183 VBD denotes revealed
T12305 134-135 -RRB- denotes )
T12306 136-144 NN denotes Sequence
T12307 145-155 NN denotes comparison
T12308 156-158 IN denotes of
T12309 159-162 DT denotes the
T12310 163-167 NN denotes gene
T12311 168-171 CC denotes and
T12312 172-174 NN denotes PS
T12313 184-188 IN denotes that
T12314 195-198 VBP denotes are
T12315 189-194 DT denotes these
T12316 199-209 JJ denotes homologous
T12317 210-214 IN denotes from
T12318 215-220 CD denotes eight
T12319 226-231 NNS denotes pairs
T12320 221-225 NN denotes base
T12321 232-240 RB denotes upstream
T12322 241-243 IN denotes of
T12323 244-247 DT denotes the
T12324 254-258 NN denotes exon
T12325 248-253 JJ denotes first
T12326 259-261 IN denotes to
T12327 262-265 CD denotes 675
T12328 266-268 NN denotes bp
T12329 269-279 RB denotes downstream
T12330 280-282 IN denotes of
T12331 283-286 DT denotes the
T12332 293-297 NN denotes exon
T12333 287-292 JJ denotes third
T12334 297-298 . denotes .
T12335 298-351 sentence denotes Substitution mutations are indicated by black lines.
T12336 299-311 NN denotes Substitution
T12337 312-321 NNS denotes mutations
T12338 326-335 VBN denotes indicated
T12339 322-325 VBP denotes are
T12340 336-338 IN denotes by
T12341 339-344 JJ denotes black
T12342 345-350 NNS denotes lines
T12343 350-351 . denotes .
T12344 351-399 sentence denotes The insertion is indicated by an open triangle.
T12345 352-355 DT denotes The
T12346 356-365 NN denotes insertion
T12347 369-378 VBN denotes indicated
T12348 366-368 VBZ denotes is
T12349 379-381 IN denotes by
T12350 382-384 DT denotes an
T12351 390-398 NN denotes triangle
T12352 385-389 JJ denotes open
T12353 398-399 . denotes .
R3495 T12275 T12276 compound BAC,clones
R3496 T12276 T12277 nsubj clones,containing
R3497 T12278 T12279 det the,gene
R3498 T12279 T12277 dobj gene,containing
R3499 T12280 T12279 compound ESG1,gene
R3500 T12281 T12279 cc and,gene
R3501 T12282 T12283 det a,pseudogene
R3502 T12283 T12279 conj pseudogene,gene
R3503 T12284 T12283 compound duplication,pseudogene
R3504 T12285 T12286 punct (,PS
R3505 T12286 T12283 parataxis PS,pseudogene
R3506 T12287 T12286 punct ),PS
R3507 T12288 T12277 punct .,containing
R3508 T12290 T12291 meta A,Localization
R3509 T12292 T12290 punct ),A
R3510 T12293 T12291 prep of,Localization
R3511 T12294 T12295 det the,gene
R3512 T12295 T12293 pobj gene,of
R3513 T12296 T12295 cc and,gene
R3514 T12297 T12295 conj PS,gene
R3515 T12298 T12291 prep on,Localization
R3516 T12299 T12298 pobj chromosome,on
R3517 T12300 T12299 nummod 9,chromosome
R3518 T12301 T12291 punct .,Localization
R3519 T12303 T12304 meta B,revealed
R3520 T12305 T12303 punct ),B
R3521 T12306 T12307 compound Sequence,comparison
R3522 T12307 T12304 nsubj comparison,revealed
R3523 T12308 T12307 prep of,comparison
R3524 T12309 T12310 det the,gene
R3525 T12310 T12308 pobj gene,of
R3526 T12311 T12310 cc and,gene
R3527 T12312 T12310 conj PS,gene
R3528 T12313 T12314 mark that,are
R3529 T12314 T12304 ccomp are,revealed
R3530 T12315 T12314 nsubj these,are
R3531 T12316 T12314 acomp homologous,are
R3532 T12317 T12316 prep from,homologous
R3533 T12318 T12319 nummod eight,pairs
R3534 T12319 T12317 pobj pairs,from
R3535 T12320 T12319 compound base,pairs
R3536 T12321 T12319 advmod upstream,pairs
R3537 T12322 T12321 prep of,upstream
R3538 T12323 T12324 det the,exon
R3539 T12324 T12322 pobj exon,of
R3540 T12325 T12324 amod first,exon
R3541 T12326 T12317 prep to,from
R3542 T12327 T12328 nummod 675,bp
R3543 T12328 T12326 pobj bp,to
R3544 T12329 T12328 advmod downstream,bp
R3545 T12330 T12329 prep of,downstream
R3546 T12331 T12332 det the,exon
R3547 T12332 T12330 pobj exon,of
R3548 T12333 T12332 amod third,exon
R3549 T12334 T12304 punct .,revealed
R3550 T12336 T12337 compound Substitution,mutations
R3551 T12337 T12338 nsubjpass mutations,indicated
R3552 T12339 T12338 auxpass are,indicated
R3553 T12340 T12338 prep by,indicated
R3554 T12341 T12342 amod black,lines
R3555 T12342 T12340 pobj lines,by
R3556 T12343 T12338 punct .,indicated
R3557 T12345 T12346 det The,insertion
R3558 T12346 T12347 nsubjpass insertion,indicated
R3559 T12348 T12347 auxpass is,indicated
R3560 T12349 T12347 prep by,indicated
R3561 T12350 T12351 det an,triangle
R3562 T12351 T12349 pobj triangle,by
R3563 T12352 T12351 amod open,triangle
R3564 T12353 T12347 punct .,indicated