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PMC:1420271 / 5335-5868 JSONTXT

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craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3814 61-65 PR:000006847 denotes ESG1
T3815 66-70 SO:0000704 denotes gene
T3816 98-105 SO:0000188 denotes introns
T3817 139-144 SO:0000147 denotes exons
T3818 195-199 PR:000006847 denotes ESG1
T3819 234-238 SO:0000147 denotes exon
T3820 288-292 PR:000006847 denotes ESG1
T3821 293-297 SO:0000704 denotes gene
T3822 406-410 SO:0000147 denotes exon
T3823 418-422 PR:000006847 denotes ESG1
T3824 423-427 SO:0000704 denotes gene
T3825 463-467 PR:000006847 denotes ESG1

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3914 3-13 GO_SO_EXT:chromosome denotes chromosome
T3915 33-36 CHEBI_SO_EXT:DNA denotes DNA
T3916 61-65 PR_EXT:000006847 denotes ESG1
T3917 66-70 SO_EXT:0000704 denotes gene
T3918 98-105 SO_EXT:0000188 denotes introns
T3919 139-144 SO_EXT:0000147 denotes exons
T3920 178-187 SO_EXT:sequence_alteration_entity_or_process denotes mutations
T3921 195-199 PR_EXT:000006847 denotes ESG1
T3922 200-204 SO_EXT:cDNA denotes cDNA
T3923 205-213 SO_EXT:biological_sequence denotes sequence
T3924 234-238 SO_EXT:0000147 denotes exon
T3925 288-292 PR_EXT:000006847 denotes ESG1
T3926 293-297 SO_EXT:0000704 denotes gene
T3927 307-317 GO_SO_EXT:chromosome denotes chromosome
T3928 343-346 CHEBI_SO_EXT:DNA denotes DNA
T3929 406-410 SO_EXT:0000147 denotes exon
T3930 418-422 PR_EXT:000006847 denotes ESG1
T3931 423-427 SO_EXT:0000704 denotes gene
T3932 463-467 PR_EXT:000006847 denotes ESG1
T3933 473-482 SO_EXT:biological_sequence denotes sequences
T3934 486-496 GO_SO_EXT:chromosome denotes chromosome

craft-sa-dev

Id Subject Object Predicate Lexical cue
T4187 61-65 NN denotes ESG1
T4188 71-75 WDT denotes that
T4189 76-84 VBD denotes included
T4190 85-88 CD denotes two
T4191 98-105 NNS denotes introns
T4192 89-97 JJ denotes putative
T4193 105-106 . denotes .
T4194 106-214 sentence denotes These putative first and second exons, however, contained (4) multiple mutations of the ESG1 cDNA sequence.
T4195 107-112 DT denotes These
T4196 139-144 NNS denotes exons
T4197 113-121 JJ denotes putative
T4198 122-127 JJ denotes first
T4199 128-131 CC denotes and
T4200 132-138 JJ denotes second
T4201 155-164 VBD denotes contained
T4202 144-146 , denotes ,
T4203 146-153 RB denotes however
T4204 153-155 , denotes ,
T4205 165-166 -LRB- denotes (
T4206 166-167 CD denotes 4
T4207 167-168 -RRB- denotes )
T4208 169-177 JJ denotes multiple
T4209 178-187 NNS denotes mutations
T4210 188-190 IN denotes of
T4211 191-194 DT denotes the
T4212 205-213 NN denotes sequence
T4213 195-199 NN denotes ESG1
T4214 200-204 NN denotes cDNA
T4215 213-214 . denotes .
T4216 214-298 sentence denotes The putative third exon was identical to that of the previously reported ESG1 gene.
T4217 215-218 DT denotes The
T4218 234-238 NN denotes exon
T4219 219-227 JJ denotes putative
T4220 228-233 JJ denotes third
T4221 239-242 VBD denotes was
T4222 243-252 JJ denotes identical
T4223 253-255 IN denotes to
T4224 256-260 DT denotes that
T4225 261-263 IN denotes of
T4226 264-267 DT denotes the
T4227 293-297 NN denotes gene
T4228 268-278 RB denotes previously
T4229 279-287 VBN denotes reported
T4230 288-292 NN denotes ESG1
T4231 297-298 . denotes .
T4232 298-428 sentence denotes Also on chromosome 9, we identified another DNA fragment that was similar, but not identical, to the third exon of the ESG1 gene.
T4233 299-303 RB denotes Also
T4234 324-334 VBD denotes identified
T4235 304-306 IN denotes on
T4236 307-317 NN denotes chromosome
T4237 318-319 CD denotes 9
T4238 319-321 , denotes ,
T4239 321-323 PRP denotes we
T4240 335-342 DT denotes another
T4241 347-355 NN denotes fragment
T4242 343-346 NN denotes DNA
T4243 356-360 WDT denotes that
T4244 361-364 VBD denotes was
T4245 365-372 JJ denotes similar
T4246 372-374 , denotes ,
T4247 374-377 CC denotes but
T4248 378-381 RB denotes not
T4249 382-391 JJ denotes identical
T4250 391-393 , denotes ,
T4251 393-395 IN denotes to
T4252 396-399 DT denotes the
T4253 406-410 NN denotes exon
T4254 400-405 JJ denotes third
T4255 411-413 IN denotes of
T4256 414-417 DT denotes the
T4257 423-427 NN denotes gene
T4258 418-422 NN denotes ESG1
T4259 427-428 . denotes .
T4260 428-533 sentence denotes These findings suggest that these ESG1-like sequences on chromosome 9 have not been correctly assembled.
T4261 429-434 DT denotes These
T4262 435-443 NNS denotes findings
T4263 444-451 VBP denotes suggest
T4264 452-456 IN denotes that
T4265 523-532 VBN denotes assembled
T4266 457-462 DT denotes these
T4267 473-482 NNS denotes sequences
T4268 463-467 NN denotes ESG1
T4269 468-472 JJ denotes like
T4270 467-468 HYPH denotes -
T4271 483-485 IN denotes on
T4272 486-496 NN denotes chromosome
T4273 497-498 CD denotes 9
T4274 499-503 VBP denotes have
T4275 504-507 RB denotes not
T4276 508-512 VBN denotes been
T4277 513-522 RB denotes correctly
T4278 532-533 . denotes .
T4183 46-53 JJ denotes similar
T4184 54-56 IN denotes to
T4185 57-60 DT denotes the
T4186 66-70 NN denotes gene
T4173 0-106 sentence denotes On chromosome 9, we identified a DNA fragment similar to the ESG1 gene that included two putative introns.
T4174 0-2 IN denotes On
T4175 20-30 VBD denotes identified
T4176 3-13 NN denotes chromosome
T4177 14-15 CD denotes 9
T4178 15-17 , denotes ,
T4179 17-19 PRP denotes we
T4180 31-32 DT denotes a
T4181 37-45 NN denotes fragment
T4182 33-36 NN denotes DNA
R873 T4174 T4175 prep On,identified
R874 T4176 T4174 pobj chromosome,On
R875 T4177 T4176 nummod 9,chromosome
R876 T4178 T4175 punct ", ",identified
R877 T4179 T4175 nsubj we,identified
R878 T4180 T4181 det a,fragment
R879 T4181 T4175 dobj fragment,identified
R880 T4182 T4181 compound DNA,fragment
R881 T4183 T4181 amod similar,fragment
R882 T4184 T4183 prep to,similar
R883 T4185 T4186 det the,gene
R884 T4186 T4184 pobj gene,to
R885 T4187 T4186 compound ESG1,gene
R886 T4188 T4189 dep that,included
R887 T4189 T4186 relcl included,gene
R888 T4190 T4191 nummod two,introns
R889 T4191 T4189 dobj introns,included
R890 T4192 T4191 amod putative,introns
R891 T4193 T4175 punct .,identified
R892 T4195 T4196 det These,exons
R893 T4196 T4201 nsubj exons,contained
R894 T4197 T4196 amod putative,exons
R895 T4198 T4196 amod first,exons
R896 T4199 T4198 cc and,first
R897 T4200 T4198 conj second,first
R898 T4202 T4201 punct ", ",contained
R899 T4203 T4201 advmod however,contained
R900 T4204 T4201 punct ", ",contained
R901 T4205 T4206 punct (,4
R902 T4206 T4201 parataxis 4,contained
R903 T4207 T4206 punct ),4
R904 T4208 T4209 amod multiple,mutations
R905 T4209 T4201 dobj mutations,contained
R906 T4210 T4209 prep of,mutations
R907 T4211 T4212 det the,sequence
R908 T4212 T4210 pobj sequence,of
R909 T4213 T4212 compound ESG1,sequence
R910 T4214 T4212 compound cDNA,sequence
R911 T4215 T4201 punct .,contained
R912 T4217 T4218 det The,exon
R913 T4218 T4221 nsubj exon,was
R914 T4219 T4218 amod putative,exon
R915 T4220 T4218 amod third,exon
R916 T4222 T4221 acomp identical,was
R917 T4223 T4222 prep to,identical
R918 T4224 T4223 pobj that,to
R919 T4225 T4224 prep of,that
R920 T4226 T4227 det the,gene
R921 T4227 T4225 pobj gene,of
R922 T4228 T4229 advmod previously,reported
R923 T4229 T4227 amod reported,gene
R924 T4230 T4227 compound ESG1,gene
R925 T4231 T4221 punct .,was
R926 T4233 T4234 advmod Also,identified
R927 T4235 T4234 prep on,identified
R928 T4236 T4235 pobj chromosome,on
R929 T4237 T4236 nummod 9,chromosome
R930 T4238 T4234 punct ", ",identified
R931 T4239 T4234 nsubj we,identified
R932 T4240 T4241 det another,fragment
R933 T4241 T4234 dobj fragment,identified
R934 T4242 T4241 compound DNA,fragment
R935 T4243 T4244 dep that,was
R936 T4244 T4241 relcl was,fragment
R937 T4245 T4244 acomp similar,was
R938 T4246 T4245 punct ", ",similar
R939 T4247 T4245 cc but,similar
R940 T4248 T4247 neg not,but
R941 T4249 T4245 conj identical,similar
R942 T4250 T4249 punct ", ",identical
R943 T4251 T4249 conj to,identical
R944 T4252 T4253 det the,exon
R945 T4253 T4251 pobj exon,to
R946 T4254 T4253 amod third,exon
R947 T4255 T4253 prep of,exon
R948 T4256 T4257 det the,gene
R949 T4257 T4255 pobj gene,of
R950 T4258 T4257 compound ESG1,gene
R951 T4259 T4234 punct .,identified
R952 T4261 T4262 det These,findings
R953 T4262 T4263 nsubj findings,suggest
R954 T4264 T4265 mark that,assembled
R955 T4265 T4263 ccomp assembled,suggest
R956 T4266 T4267 det these,sequences
R957 T4267 T4265 nsubjpass sequences,assembled
R958 T4268 T4269 npadvmod ESG1,like
R959 T4269 T4267 amod like,sequences
R960 T4270 T4269 punct -,like
R961 T4271 T4267 prep on,sequences
R962 T4272 T4271 pobj chromosome,on
R963 T4273 T4272 nummod 9,chromosome
R964 T4274 T4265 aux have,assembled
R965 T4275 T4265 neg not,assembled
R966 T4276 T4265 auxpass been,assembled
R967 T4277 T4265 advmod correctly,assembled
R968 T4278 T4263 punct .,suggest