PMC:1420271 / 21070-21475
Annnotations
{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1420271","sourcedb":"PMC","sourceid":"1420271","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1420271","text":"Total RNA from wild-type ES cells and ESG1-/- ES cells was labeled with Cy3 and Cy5, respectively. The samples were hybridized to a Mouse Development Microarray (Algilent) according to the manufacturer's protocol. Arrays were scanned with a G2565BA Microarray Scanner System (Agilent). Hybridization was repeated with two independent clones. Data were analyzed with GeneSprings software (Silico Genetics).","tracks":[{"project":"craft-ca-core-dev","denotations":[{"id":"T11858","span":{"begin":25,"end":33},"obj":"CL:0002322"},{"id":"T11859","span":{"begin":38,"end":42},"obj":"PR:000006847"},{"id":"T11860","span":{"begin":46,"end":54},"obj":"CL:0002322"},{"id":"T11861","span":{"begin":72,"end":75},"obj":"CHEBI:37987"},{"id":"T11862","span":{"begin":80,"end":83},"obj":"CHEBI:37989"},{"id":"T11863","span":{"begin":116,"end":126},"obj":"GO:0097617"},{"id":"T11864","span":{"begin":132,"end":137},"obj":"NCBITaxon:10088"},{"id":"T11865","span":{"begin":286,"end":299},"obj":"GO:0097617"}],"attributes":[{"subj":"T11858","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T11859","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T11860","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T11861","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T11862","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T11863","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T11864","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T11865","pred":"source","obj":"craft-ca-core-dev"}]},{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T11866","span":{"begin":6,"end":9},"obj":"CHEBI_SO_EXT:RNA"},{"id":"T11867","span":{"begin":15,"end":24},"obj":"SO_EXT:wild_type_entity_or_quality"},{"id":"T11868","span":{"begin":25,"end":33},"obj":"CL:0002322"},{"id":"T11869","span":{"begin":28,"end":33},"obj":"CL_GO_EXT:cell"},{"id":"T11870","span":{"begin":38,"end":42},"obj":"PR_EXT:000006847"},{"id":"T11871","span":{"begin":42,"end":43},"obj":"SO_EXT:sequence_nullness_or_absence"},{"id":"T11872","span":{"begin":44,"end":45},"obj":"SO_EXT:sequence_nullness_or_absence"},{"id":"T11873","span":{"begin":46,"end":54},"obj":"CL:0002322"},{"id":"T11874","span":{"begin":49,"end":54},"obj":"CL_GO_EXT:cell"},{"id":"T11875","span":{"begin":59,"end":66},"obj":"CHEBI_SO_EXT:molecular_label_or_mark_or_tag_process"},{"id":"T11876","span":{"begin":72,"end":75},"obj":"CHEBI:37987"},{"id":"T11877","span":{"begin":80,"end":83},"obj":"CHEBI:37989"},{"id":"T11878","span":{"begin":116,"end":126},"obj":"GO:0097617"},{"id":"T11879","span":{"begin":132,"end":137},"obj":"NCBITaxon:10088"},{"id":"T11880","span":{"begin":286,"end":299},"obj":"GO:0097617"},{"id":"T11881","span":{"begin":334,"end":340},"obj":"SO_EXT:sequence_cloned_entity"},{"id":"T11882","span":{"begin":395,"end":403},"obj":"OBI_SO_EXT:gene_or_genetic_investigation_or_genetic_process"}],"attributes":[{"subj":"T11866","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11867","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11868","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11869","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11870","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11871","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11872","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11873","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11874","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11875","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11876","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11877","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11878","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11879","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11880","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11881","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T11882","pred":"source","obj":"craft-ca-core-ex-dev"}]},{"project":"craft-sa-dev","denotations":[{"id":"T11885","span":{"begin":0,"end":5},"obj":"JJ"},{"id":"T11886","span":{"begin":6,"end":9},"obj":"NN"},{"id":"T11887","span":{"begin":59,"end":66},"obj":"VBN"},{"id":"T11888","span":{"begin":10,"end":14},"obj":"IN"},{"id":"T11889","span":{"begin":15,"end":19},"obj":"JJ"},{"id":"T11890","span":{"begin":20,"end":24},"obj":"NN"},{"id":"T11891","span":{"begin":19,"end":20},"obj":"HYPH"},{"id":"T11892","span":{"begin":28,"end":33},"obj":"NNS"},{"id":"T11893","span":{"begin":25,"end":27},"obj":"NN"},{"id":"T11894","span":{"begin":34,"end":37},"obj":"CC"},{"id":"T11895","span":{"begin":38,"end":42},"obj":"NN"},{"id":"T11896","span":{"begin":49,"end":54},"obj":"NNS"},{"id":"T11897","span":{"begin":42,"end":43},"obj":"SYM"},{"id":"T11898","span":{"begin":43,"end":44},"obj":"HYPH"},{"id":"T11899","span":{"begin":44,"end":45},"obj":"SYM"},{"id":"T11900","span":{"begin":46,"end":48},"obj":"NN"},{"id":"T11901","span":{"begin":55,"end":58},"obj":"VBD"},{"id":"T11902","span":{"begin":67,"end":71},"obj":"IN"},{"id":"T11903","span":{"begin":72,"end":75},"obj":"NN"},{"id":"T11904","span":{"begin":76,"end":79},"obj":"CC"},{"id":"T11905","span":{"begin":80,"end":83},"obj":"NN"},{"id":"T11906","span":{"begin":83,"end":85},"obj":","},{"id":"T11907","span":{"begin":85,"end":97},"obj":"RB"},{"id":"T11908","span":{"begin":97,"end":98},"obj":"."},{"id":"T11909","span":{"begin":98,"end":213},"obj":"sentence"},{"id":"T11910","span":{"begin":99,"end":102},"obj":"DT"},{"id":"T11911","span":{"begin":103,"end":110},"obj":"NNS"},{"id":"T11912","span":{"begin":116,"end":126},"obj":"VBN"},{"id":"T11913","span":{"begin":111,"end":115},"obj":"VBD"},{"id":"T11914","span":{"begin":127,"end":129},"obj":"IN"},{"id":"T11915","span":{"begin":130,"end":131},"obj":"DT"},{"id":"T11916","span":{"begin":150,"end":160},"obj":"NN"},{"id":"T11917","span":{"begin":132,"end":137},"obj":"NN"},{"id":"T11918","span":{"begin":138,"end":149},"obj":"NN"},{"id":"T11919","span":{"begin":161,"end":162},"obj":"-LRB-"},{"id":"T11920","span":{"begin":162,"end":170},"obj":"NNP"},{"id":"T11921","span":{"begin":170,"end":171},"obj":"-RRB-"},{"id":"T11922","span":{"begin":172,"end":181},"obj":"VBG"},{"id":"T11923","span":{"begin":182,"end":184},"obj":"IN"},{"id":"T11924","span":{"begin":185,"end":188},"obj":"DT"},{"id":"T11925","span":{"begin":189,"end":201},"obj":"NN"},{"id":"T11926","span":{"begin":204,"end":212},"obj":"NN"},{"id":"T11927","span":{"begin":201,"end":203},"obj":"POS"},{"id":"T11928","span":{"begin":212,"end":213},"obj":"."},{"id":"T11929","span":{"begin":213,"end":285},"obj":"sentence"},{"id":"T11930","span":{"begin":214,"end":220},"obj":"NNS"},{"id":"T11931","span":{"begin":226,"end":233},"obj":"VBN"},{"id":"T11932","span":{"begin":221,"end":225},"obj":"VBD"},{"id":"T11933","span":{"begin":234,"end":238},"obj":"IN"},{"id":"T11934","span":{"begin":239,"end":240},"obj":"DT"},{"id":"T11935","span":{"begin":268,"end":274},"obj":"NN"},{"id":"T11936","span":{"begin":241,"end":248},"obj":"NN"},{"id":"T11937","span":{"begin":249,"end":259},"obj":"NN"},{"id":"T11938","span":{"begin":260,"end":267},"obj":"NN"},{"id":"T11939","span":{"begin":275,"end":276},"obj":"-LRB-"},{"id":"T11940","span":{"begin":276,"end":283},"obj":"NNP"},{"id":"T11941","span":{"begin":283,"end":284},"obj":"-RRB-"},{"id":"T11942","span":{"begin":284,"end":285},"obj":"."},{"id":"T11943","span":{"begin":285,"end":341},"obj":"sentence"},{"id":"T11944","span":{"begin":286,"end":299},"obj":"NN"},{"id":"T11945","span":{"begin":304,"end":312},"obj":"VBN"},{"id":"T11946","span":{"begin":300,"end":303},"obj":"VBD"},{"id":"T11947","span":{"begin":313,"end":317},"obj":"IN"},{"id":"T11948","span":{"begin":318,"end":321},"obj":"CD"},{"id":"T11949","span":{"begin":334,"end":340},"obj":"NNS"},{"id":"T11950","span":{"begin":322,"end":333},"obj":"JJ"},{"id":"T11951","span":{"begin":340,"end":341},"obj":"."},{"id":"T11952","span":{"begin":341,"end":405},"obj":"sentence"},{"id":"T11953","span":{"begin":342,"end":346},"obj":"NNS"},{"id":"T11954","span":{"begin":352,"end":360},"obj":"VBN"},{"id":"T11955","span":{"begin":347,"end":351},"obj":"VBD"},{"id":"T11956","span":{"begin":361,"end":365},"obj":"IN"},{"id":"T11957","span":{"begin":366,"end":377},"obj":"NNP"},{"id":"T11958","span":{"begin":378,"end":386},"obj":"NN"},{"id":"T11959","span":{"begin":387,"end":388},"obj":"-LRB-"},{"id":"T11960","span":{"begin":395,"end":403},"obj":"NNP"},{"id":"T11961","span":{"begin":388,"end":394},"obj":"NNP"},{"id":"T11962","span":{"begin":403,"end":404},"obj":"-RRB-"},{"id":"T11963","span":{"begin":404,"end":405},"obj":"."}],"relations":[{"id":"R3392","pred":"amod","subj":"T11885","obj":"T11886"},{"id":"R3393","pred":"nsubjpass","subj":"T11886","obj":"T11887"},{"id":"R3394","pred":"prep","subj":"T11888","obj":"T11886"},{"id":"R3395","pred":"amod","subj":"T11889","obj":"T11890"},{"id":"R3396","pred":"compound","subj":"T11890","obj":"T11892"},{"id":"R3397","pred":"punct","subj":"T11891","obj":"T11890"},{"id":"R3398","pred":"pobj","subj":"T11892","obj":"T11888"},{"id":"R3399","pred":"compound","subj":"T11893","obj":"T11892"},{"id":"R3400","pred":"cc","subj":"T11894","obj":"T11892"},{"id":"R3401","pred":"nmod","subj":"T11895","obj":"T11896"},{"id":"R3402","pred":"conj","subj":"T11896","obj":"T11892"},{"id":"R3403","pred":"punct","subj":"T11897","obj":"T11895"},{"id":"R3404","pred":"punct","subj":"T11898","obj":"T11895"},{"id":"R3405","pred":"punct","subj":"T11899","obj":"T11895"},{"id":"R3406","pred":"compound","subj":"T11900","obj":"T11896"},{"id":"R3407","pred":"auxpass","subj":"T11901","obj":"T11887"},{"id":"R3408","pred":"prep","subj":"T11902","obj":"T11887"},{"id":"R3409","pred":"pobj","subj":"T11903","obj":"T11902"},{"id":"R3410","pred":"cc","subj":"T11904","obj":"T11903"},{"id":"R3411","pred":"conj","subj":"T11905","obj":"T11903"},{"id":"R3412","pred":"punct","subj":"T11906","obj":"T11887"},{"id":"R3413","pred":"advmod","subj":"T11907","obj":"T11887"},{"id":"R3414","pred":"punct","subj":"T11908","obj":"T11887"},{"id":"R3415","pred":"det","subj":"T11910","obj":"T11911"},{"id":"R3416","pred":"nsubjpass","subj":"T11911","obj":"T11912"},{"id":"R3417","pred":"auxpass","subj":"T11913","obj":"T11912"},{"id":"R3418","pred":"prep","subj":"T11914","obj":"T11912"},{"id":"R3419","pred":"det","subj":"T11915","obj":"T11916"},{"id":"R3420","pred":"pobj","subj":"T11916","obj":"T11914"},{"id":"R3421","pred":"compound","subj":"T11917","obj":"T11916"},{"id":"R3422","pred":"compound","subj":"T11918","obj":"T11916"},{"id":"R3423","pred":"punct","subj":"T11919","obj":"T11920"},{"id":"R3424","pred":"parataxis","subj":"T11920","obj":"T11916"},{"id":"R3425","pred":"punct","subj":"T11921","obj":"T11920"},{"id":"R3426","pred":"prep","subj":"T11922","obj":"T11912"},{"id":"R3427","pred":"prep","subj":"T11923","obj":"T11922"},{"id":"R3428","pred":"det","subj":"T11924","obj":"T11925"},{"id":"R3429","pred":"poss","subj":"T11925","obj":"T11926"},{"id":"R3430","pred":"pobj","subj":"T11926","obj":"T11923"},{"id":"R3431","pred":"case","subj":"T11927","obj":"T11925"},{"id":"R3432","pred":"punct","subj":"T11928","obj":"T11912"},{"id":"R3433","pred":"nsubjpass","subj":"T11930","obj":"T11931"},{"id":"R3434","pred":"auxpass","subj":"T11932","obj":"T11931"},{"id":"R3435","pred":"prep","subj":"T11933","obj":"T11931"},{"id":"R3436","pred":"det","subj":"T11934","obj":"T11935"},{"id":"R3437","pred":"pobj","subj":"T11935","obj":"T11933"},{"id":"R3438","pred":"compound","subj":"T11936","obj":"T11935"},{"id":"R3439","pred":"compound","subj":"T11937","obj":"T11935"},{"id":"R3440","pred":"compound","subj":"T11938","obj":"T11935"},{"id":"R3441","pred":"punct","subj":"T11939","obj":"T11940"},{"id":"R3442","pred":"parataxis","subj":"T11940","obj":"T11935"},{"id":"R3443","pred":"punct","subj":"T11941","obj":"T11940"},{"id":"R3444","pred":"punct","subj":"T11942","obj":"T11931"},{"id":"R3445","pred":"nsubjpass","subj":"T11944","obj":"T11945"},{"id":"R3446","pred":"auxpass","subj":"T11946","obj":"T11945"},{"id":"R3447","pred":"prep","subj":"T11947","obj":"T11945"},{"id":"R3448","pred":"nummod","subj":"T11948","obj":"T11949"},{"id":"R3449","pred":"pobj","subj":"T11949","obj":"T11947"},{"id":"R3450","pred":"amod","subj":"T11950","obj":"T11949"},{"id":"R3451","pred":"punct","subj":"T11951","obj":"T11945"},{"id":"R3452","pred":"nsubjpass","subj":"T11953","obj":"T11954"},{"id":"R3453","pred":"auxpass","subj":"T11955","obj":"T11954"},{"id":"R3454","pred":"prep","subj":"T11956","obj":"T11954"},{"id":"R3455","pred":"compound","subj":"T11957","obj":"T11958"},{"id":"R3456","pred":"pobj","subj":"T11958","obj":"T11956"},{"id":"R3457","pred":"punct","subj":"T11959","obj":"T11960"},{"id":"R3458","pred":"parataxis","subj":"T11960","obj":"T11958"},{"id":"R3459","pred":"compound","subj":"T11961","obj":"T11960"},{"id":"R3460","pred":"punct","subj":"T11962","obj":"T11960"},{"id":"R3461","pred":"punct","subj":"T11963","obj":"T11954"}],"attributes":[{"subj":"T11885","pred":"source","obj":"craft-sa-dev"},{"subj":"T11886","pred":"source","obj":"craft-sa-dev"},{"subj":"T11887","pred":"source","obj":"craft-sa-dev"},{"subj":"T11888","pred":"source","obj":"craft-sa-dev"},{"subj":"T11889","pred":"source","obj":"craft-sa-dev"},{"subj":"T11890","pred":"source","obj":"craft-sa-dev"},{"subj":"T11891","pred":"source","obj":"craft-sa-dev"},{"subj":"T11892","pred":"source","obj":"craft-sa-dev"},{"subj":"T11893","pred":"source","obj":"craft-sa-dev"},{"subj":"T11894","pred":"source","obj":"craft-sa-dev"},{"subj":"T11895","pred":"source","obj":"craft-sa-dev"},{"subj":"T11896","pred":"source","obj":"craft-sa-dev"},{"subj":"T11897","pred":"source","obj":"craft-sa-dev"},{"subj":"T11898","pred":"source","obj":"craft-sa-dev"},{"subj":"T11899","pred":"source","obj":"craft-sa-dev"},{"subj":"T11900","pred":"source","obj":"craft-sa-dev"},{"subj":"T11901","pred":"source","obj":"craft-sa-dev"},{"subj":"T11902","pred":"source","obj":"craft-sa-dev"},{"subj":"T11903","pred":"source","obj":"craft-sa-dev"},{"subj":"T11904","pred":"source","obj":"craft-sa-dev"},{"subj":"T11905","pred":"source","obj":"craft-sa-dev"},{"subj":"T11906","pred":"source","obj":"craft-sa-dev"},{"subj":"T11907","pred":"source","obj":"craft-sa-dev"},{"subj":"T11908","pred":"source","obj":"craft-sa-dev"},{"subj":"T11909","pred":"source","obj":"craft-sa-dev"},{"subj":"T11910","pred":"source","obj":"craft-sa-dev"},{"subj":"T11911","pred":"source","obj":"craft-sa-dev"},{"subj":"T11912","pred":"source","obj":"craft-sa-dev"},{"subj":"T11913","pred":"source","obj":"craft-sa-dev"},{"subj":"T11914","pred":"source","obj":"craft-sa-dev"},{"subj":"T11915","pred":"source","obj":"craft-sa-dev"},{"subj":"T11916","pred":"source","obj":"craft-sa-dev"},{"subj":"T11917","pred":"source","obj":"craft-sa-dev"},{"subj":"T11918","pred":"source","obj":"craft-sa-dev"},{"subj":"T11919","pred":"source","obj":"craft-sa-dev"},{"subj":"T11920","pred":"source","obj":"craft-sa-dev"},{"subj":"T11921","pred":"source","obj":"craft-sa-dev"},{"subj":"T11922","pred":"source","obj":"craft-sa-dev"},{"subj":"T11923","pred":"source","obj":"craft-sa-dev"},{"subj":"T11924","pred":"source","obj":"craft-sa-dev"},{"subj":"T11925","pred":"source","obj":"craft-sa-dev"},{"subj":"T11926","pred":"source","obj":"craft-sa-dev"},{"subj":"T11927","pred":"source","obj":"craft-sa-dev"},{"subj":"T11928","pred":"source","obj":"craft-sa-dev"},{"subj":"T11929","pred":"source","obj":"craft-sa-dev"},{"subj":"T11930","pred":"source","obj":"craft-sa-dev"},{"subj":"T11931","pred":"source","obj":"craft-sa-dev"},{"subj":"T11932","pred":"source","obj":"craft-sa-dev"},{"subj":"T11933","pred":"source","obj":"craft-sa-dev"},{"subj":"T11934","pred":"source","obj":"craft-sa-dev"},{"subj":"T11935","pred":"source","obj":"craft-sa-dev"},{"subj":"T11936","pred":"source","obj":"craft-sa-dev"},{"subj":"T11937","pred":"source","obj":"craft-sa-dev"},{"subj":"T11938","pred":"source","obj":"craft-sa-dev"},{"subj":"T11939","pred":"source","obj":"craft-sa-dev"},{"subj":"T11940","pred":"source","obj":"craft-sa-dev"},{"subj":"T11941","pred":"source","obj":"craft-sa-dev"},{"subj":"T11942","pred":"source","obj":"craft-sa-dev"},{"subj":"T11943","pred":"source","obj":"craft-sa-dev"},{"subj":"T11944","pred":"source","obj":"craft-sa-dev"},{"subj":"T11945","pred":"source","obj":"craft-sa-dev"},{"subj":"T11946","pred":"source","obj":"craft-sa-dev"},{"subj":"T11947","pred":"source","obj":"craft-sa-dev"},{"subj":"T11948","pred":"source","obj":"craft-sa-dev"},{"subj":"T11949","pred":"source","obj":"craft-sa-dev"},{"subj":"T11950","pred":"source","obj":"craft-sa-dev"},{"subj":"T11951","pred":"source","obj":"craft-sa-dev"},{"subj":"T11952","pred":"source","obj":"craft-sa-dev"},{"subj":"T11953","pred":"source","obj":"craft-sa-dev"},{"subj":"T11954","pred":"source","obj":"craft-sa-dev"},{"subj":"T11955","pred":"source","obj":"craft-sa-dev"},{"subj":"T11956","pred":"source","obj":"craft-sa-dev"},{"subj":"T11957","pred":"source","obj":"craft-sa-dev"},{"subj":"T11958","pred":"source","obj":"craft-sa-dev"},{"subj":"T11959","pred":"source","obj":"craft-sa-dev"},{"subj":"T11960","pred":"source","obj":"craft-sa-dev"},{"subj":"T11961","pred":"source","obj":"craft-sa-dev"},{"subj":"T11962","pred":"source","obj":"craft-sa-dev"},{"subj":"T11963","pred":"source","obj":"craft-sa-dev"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"craft-ca-core-dev","color":"#93a9ec","default":true},{"id":"craft-ca-core-ex-dev","color":"#c3ec93"},{"id":"craft-sa-dev","color":"#ec93dd"}]}]}}