PMC:1382200 / 9139-9332
Annnotations
craft-sa-dev
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21328 | 0-193 | sentence | denotes | The reaction to detect the wild-type allele used an antisense primer located in exon 7 while the amplification of the mutant sequence was done with an antisense primer in the PGK-Neo cassette. |
| T21329 | 1-4 | DT | denotes | The |
| T21330 | 5-13 | NN | denotes | reaction |
| T21331 | 45-49 | VBD | denotes | used |
| T21332 | 14-16 | TO | denotes | to |
| T21333 | 17-23 | VB | denotes | detect |
| T21334 | 24-27 | DT | denotes | the |
| T21335 | 38-44 | NN | denotes | allele |
| T21336 | 28-32 | JJ | denotes | wild |
| T21337 | 33-37 | NN | denotes | type |
| T21338 | 32-33 | HYPH | denotes | - |
| T21339 | 50-52 | DT | denotes | an |
| T21340 | 63-69 | NN | denotes | primer |
| T21341 | 53-62 | NN | denotes | antisense |
| T21342 | 70-77 | VBN | denotes | located |
| T21343 | 78-80 | IN | denotes | in |
| T21344 | 81-85 | NN | denotes | exon |
| T21345 | 86-87 | CD | denotes | 7 |
| T21346 | 88-93 | IN | denotes | while |
| T21347 | 139-143 | VBN | denotes | done |
| T21348 | 94-97 | DT | denotes | the |
| T21349 | 98-111 | NN | denotes | amplification |
| T21350 | 112-114 | IN | denotes | of |
| T21351 | 115-118 | DT | denotes | the |
| T21352 | 126-134 | NN | denotes | sequence |
| T21353 | 119-125 | NN | denotes | mutant |
| T21354 | 135-138 | VBD | denotes | was |
| T21355 | 144-148 | IN | denotes | with |
| T21356 | 149-151 | DT | denotes | an |
| T21357 | 162-168 | NN | denotes | primer |
| T21358 | 152-161 | NN | denotes | antisense |
| T21359 | 169-171 | IN | denotes | in |
| T21360 | 172-175 | DT | denotes | the |
| T21361 | 184-192 | NN | denotes | cassette |
| T21362 | 176-179 | NN | denotes | PGK |
| T21363 | 180-183 | NN | denotes | Neo |
| T21364 | 179-180 | HYPH | denotes | - |
| T21365 | 192-193 | . | denotes | . |
| R6398 | T21329 | T21330 | det | The,reaction |
| R6399 | T21330 | T21331 | nsubj | reaction,used |
| R6400 | T21332 | T21333 | aux | to,detect |
| R6401 | T21333 | T21330 | advcl | detect,reaction |
| R6402 | T21334 | T21335 | det | the,allele |
| R6403 | T21335 | T21333 | dobj | allele,detect |
| R6404 | T21336 | T21337 | amod | wild,type |
| R6405 | T21337 | T21335 | compound | type,allele |
| R6406 | T21338 | T21337 | punct | -,type |
| R6407 | T21339 | T21340 | det | an,primer |
| R6408 | T21340 | T21331 | dobj | primer,used |
| R6409 | T21341 | T21340 | compound | antisense,primer |
| R6410 | T21342 | T21340 | acl | located,primer |
| R6411 | T21343 | T21342 | prep | in,located |
| R6412 | T21344 | T21343 | pobj | exon,in |
| R6413 | T21345 | T21344 | nummod | 7,exon |
| R6414 | T21346 | T21347 | mark | while,done |
| R6415 | T21347 | T21331 | advcl | done,used |
| R6416 | T21348 | T21349 | det | the,amplification |
| R6417 | T21349 | T21347 | nsubjpass | amplification,done |
| R6418 | T21350 | T21349 | prep | of,amplification |
| R6419 | T21351 | T21352 | det | the,sequence |
| R6420 | T21352 | T21350 | pobj | sequence,of |
| R6421 | T21353 | T21352 | compound | mutant,sequence |
| R6422 | T21354 | T21347 | auxpass | was,done |
| R6423 | T21355 | T21347 | prep | with,done |
| R6424 | T21356 | T21357 | det | an,primer |
| R6425 | T21357 | T21355 | pobj | primer,with |
| R6426 | T21358 | T21357 | compound | antisense,primer |
| R6427 | T21359 | T21357 | prep | in,primer |
| R6428 | T21360 | T21361 | det | the,cassette |
| R6429 | T21361 | T21359 | pobj | cassette,in |
| R6430 | T21362 | T21363 | compound | PGK,Neo |
| R6431 | T21363 | T21361 | compound | Neo,cassette |
| R6432 | T21364 | T21363 | punct | -,Neo |
| R6433 | T21365 | T21331 | punct | .,used |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21084 | 38-44 | SO:0001023 | denotes | allele |
| T21085 | 53-62 | SO:0000077 | denotes | antisense |
| T21086 | 63-69 | SO:0000112 | denotes | primer |
| T21087 | 81-85 | SO:0000147 | denotes | exon |
| T21088 | 152-161 | SO:0000077 | denotes | antisense |
| T21089 | 162-168 | SO:0000112 | denotes | primer |
| T21090 | 184-192 | SO:0005853 | denotes | cassette |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
| Id | Subject | Object | Predicate | Lexical cue |
|---|---|---|---|---|
| T21130 | 28-37 | SO_EXT:wild_type_entity_or_quality | denotes | wild-type |
| T21131 | 38-44 | SO_EXT:0001023 | denotes | allele |
| T21132 | 53-62 | SO:0000077 | denotes | antisense |
| T21133 | 63-69 | SO_EXT:0000112 | denotes | primer |
| T21134 | 81-85 | SO_EXT:0000147 | denotes | exon |
| T21135 | 119-125 | SO_EXT:sequence_altered_entity_or_alteration_process | denotes | mutant |
| T21136 | 126-134 | SO_EXT:biological_sequence | denotes | sequence |
| T21137 | 152-161 | SO:0000077 | denotes | antisense |
| T21138 | 162-168 | SO_EXT:0000112 | denotes | primer |
| T21139 | 176-179 | GO_EXT:phosphoglycerate_kinase | denotes | PGK |
| T21140 | 180-183 | CHEBI_GO_EXT:neomycin_or_neomycin_phosphotransferase | denotes | Neo |
| T21141 | 184-192 | SO_EXT:0005853 | denotes | cassette |