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PMC:1382200 / 9138-9374 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T21327 0-1 . denotes .
T21328 1-194 sentence denotes The reaction to detect the wild-type allele used an antisense primer located in exon 7 while the amplification of the mutant sequence was done with an antisense primer in the PGK-Neo cassette.
T21329 2-5 DT denotes The
T21330 6-14 NN denotes reaction
T21331 46-50 VBD denotes used
T21332 15-17 TO denotes to
T21333 18-24 VB denotes detect
T21334 25-28 DT denotes the
T21335 39-45 NN denotes allele
T21336 29-33 JJ denotes wild
T21337 34-38 NN denotes type
T21338 33-34 HYPH denotes -
T21339 51-53 DT denotes an
T21340 64-70 NN denotes primer
T21341 54-63 NN denotes antisense
T21342 71-78 VBN denotes located
T21343 79-81 IN denotes in
T21344 82-86 NN denotes exon
T21345 87-88 CD denotes 7
T21346 89-94 IN denotes while
T21347 140-144 VBN denotes done
T21348 95-98 DT denotes the
T21349 99-112 NN denotes amplification
T21350 113-115 IN denotes of
T21351 116-119 DT denotes the
T21352 127-135 NN denotes sequence
T21353 120-126 NN denotes mutant
T21354 136-139 VBD denotes was
T21355 145-149 IN denotes with
T21356 150-152 DT denotes an
T21357 163-169 NN denotes primer
T21358 153-162 NN denotes antisense
T21359 170-172 IN denotes in
T21360 173-176 DT denotes the
T21361 185-193 NN denotes cassette
T21362 177-180 NN denotes PGK
T21363 181-184 NN denotes Neo
T21364 180-181 HYPH denotes -
T21365 193-194 . denotes .
T21367 195-198 DT denotes The
T21368 199-206 NNS denotes results
T21369 207-214 VBP denotes confirm
T21370 215-218 DT denotes the
T21371 219-227 NN denotes presence
T21372 228-230 IN denotes of
T21373 231-234 DT denotes the
R6398 T21329 T21330 det The,reaction
R6399 T21330 T21331 nsubj reaction,used
R6400 T21332 T21333 aux to,detect
R6401 T21333 T21330 advcl detect,reaction
R6402 T21334 T21335 det the,allele
R6403 T21335 T21333 dobj allele,detect
R6404 T21336 T21337 amod wild,type
R6405 T21337 T21335 compound type,allele
R6406 T21338 T21337 punct -,type
R6407 T21339 T21340 det an,primer
R6408 T21340 T21331 dobj primer,used
R6409 T21341 T21340 compound antisense,primer
R6410 T21342 T21340 acl located,primer
R6411 T21343 T21342 prep in,located
R6412 T21344 T21343 pobj exon,in
R6413 T21345 T21344 nummod 7,exon
R6414 T21346 T21347 mark while,done
R6415 T21347 T21331 advcl done,used
R6416 T21348 T21349 det the,amplification
R6417 T21349 T21347 nsubjpass amplification,done
R6418 T21350 T21349 prep of,amplification
R6419 T21351 T21352 det the,sequence
R6420 T21352 T21350 pobj sequence,of
R6421 T21353 T21352 compound mutant,sequence
R6422 T21354 T21347 auxpass was,done
R6423 T21355 T21347 prep with,done
R6424 T21356 T21357 det an,primer
R6425 T21357 T21355 pobj primer,with
R6426 T21358 T21357 compound antisense,primer
R6427 T21359 T21357 prep in,primer
R6428 T21360 T21361 det the,cassette
R6429 T21361 T21359 pobj cassette,in
R6430 T21362 T21363 compound PGK,Neo
R6431 T21363 T21361 compound Neo,cassette
R6432 T21364 T21363 punct -,Neo
R6433 T21365 T21331 punct .,used
R6434 T21367 T21368 det The,results
R6435 T21368 T21369 nsubj results,confirm
R6436 T21370 T21371 det the,presence
R6437 T21371 T21369 dobj presence,confirm
R6438 T21372 T21371 prep of,presence

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21084 39-45 SO:0001023 denotes allele
T21085 54-63 SO:0000077 denotes antisense
T21086 64-70 SO:0000112 denotes primer
T21087 82-86 SO:0000147 denotes exon
T21088 153-162 SO:0000077 denotes antisense
T21089 163-169 SO:0000112 denotes primer
T21090 185-193 SO:0005853 denotes cassette

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21130 29-38 SO_EXT:wild_type_entity_or_quality denotes wild-type
T21131 39-45 SO_EXT:0001023 denotes allele
T21132 54-63 SO:0000077 denotes antisense
T21133 64-70 SO_EXT:0000112 denotes primer
T21134 82-86 SO_EXT:0000147 denotes exon
T21135 120-126 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T21136 127-135 SO_EXT:biological_sequence denotes sequence
T21137 153-162 SO:0000077 denotes antisense
T21138 163-169 SO_EXT:0000112 denotes primer
T21139 177-180 GO_EXT:phosphoglycerate_kinase denotes PGK
T21140 181-184 CHEBI_GO_EXT:neomycin_or_neomycin_phosphotransferase denotes Neo
T21141 185-193 SO_EXT:0005853 denotes cassette