PMC:1382200 / 4595-7068
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3849 | 0-8 | VBN | denotes | Targeted |
T3850 | 14-22 | NN | denotes | deletion |
T3851 | 9-13 | NN | denotes | gene |
T3852 | 31-39 | VBZ | denotes | provides |
T3853 | 23-25 | IN | denotes | in |
T3854 | 26-30 | NNS | denotes | mice |
T3855 | 40-41 | DT | denotes | a |
T3856 | 51-59 | NN | denotes | approach |
T3857 | 42-50 | JJ | denotes | powerful |
T3858 | 60-62 | IN | denotes | to |
T3859 | 63-74 | VBG | denotes | determining |
T3860 | 75-78 | DT | denotes | the |
T3861 | 93-98 | NNS | denotes | roles |
T3862 | 79-92 | JJ | denotes | physiological |
T3863 | 99-101 | IN | denotes | of |
T3864 | 102-103 | NN | denotes | μ |
T3865 | 111-118 | NN | denotes | calpain |
T3866 | 103-104 | HYPH | denotes | - |
T3867 | 105-108 | CC | denotes | and |
T3868 | 109-110 | NN | denotes | m |
T3869 | 110-111 | HYPH | denotes | - |
T3870 | 119-122 | CC | denotes | and |
T3871 | 123-126 | DT | denotes | the |
T3872 | 127-138 | NN | denotes | opportunity |
T3873 | 139-141 | TO | denotes | to |
T3874 | 142-150 | VB | denotes | approach |
T3875 | 151-156 | PRP$ | denotes | their |
T3876 | 174-183 | NNS | denotes | functions |
T3877 | 157-164 | NN | denotes | isoform |
T3878 | 165-173 | JJ | denotes | specific |
T3879 | 183-184 | . | denotes | . |
T3880 | 184-322 | sentence | denotes | Initial studies targeted Capn4 based on the prediction that loss of this calpain subunit would abolish activity of both μ- and m-calpain. |
T3881 | 185-192 | JJ | denotes | Initial |
T3882 | 193-200 | NNS | denotes | studies |
T3883 | 201-209 | VBD | denotes | targeted |
T3884 | 210-215 | NN | denotes | Capn4 |
T3885 | 216-221 | VBN | denotes | based |
T3886 | 222-224 | IN | denotes | on |
T3887 | 225-228 | DT | denotes | the |
T3888 | 229-239 | NN | denotes | prediction |
T3889 | 240-244 | IN | denotes | that |
T3890 | 280-287 | VB | denotes | abolish |
T3891 | 245-249 | NN | denotes | loss |
T3892 | 250-252 | IN | denotes | of |
T3893 | 253-257 | DT | denotes | this |
T3894 | 266-273 | NN | denotes | subunit |
T3895 | 258-265 | NN | denotes | calpain |
T3896 | 274-279 | MD | denotes | would |
T3897 | 288-296 | NN | denotes | activity |
T3898 | 297-299 | IN | denotes | of |
T3899 | 300-304 | CC | denotes | both |
T3900 | 305-306 | NN | denotes | μ |
T3901 | 314-321 | NN | denotes | calpain |
T3902 | 306-307 | HYPH | denotes | - |
T3903 | 308-311 | CC | denotes | and |
T3904 | 312-313 | NN | denotes | m |
T3905 | 313-314 | HYPH | denotes | - |
T3906 | 321-322 | . | denotes | . |
T3907 | 322-475 | sentence | denotes | Capn4-/- murine embryos died between days 10 and 11 of gestation, and there was no detectable μ- or m-calpain activity in these or younger embryos [31]. |
T3908 | 323-328 | NN | denotes | Capn4 |
T3909 | 339-346 | NNS | denotes | embryos |
T3910 | 328-329 | SYM | denotes | - |
T3911 | 329-330 | HYPH | denotes | / |
T3912 | 330-331 | SYM | denotes | - |
T3913 | 332-338 | JJ | denotes | murine |
T3914 | 347-351 | VBD | denotes | died |
T3915 | 352-359 | IN | denotes | between |
T3916 | 360-364 | NNS | denotes | days |
T3917 | 365-367 | CD | denotes | 10 |
T3918 | 368-371 | CC | denotes | and |
T3919 | 372-374 | CD | denotes | 11 |
T3920 | 375-377 | IN | denotes | of |
T3921 | 378-387 | NN | denotes | gestation |
T3922 | 387-389 | , | denotes | , |
T3923 | 389-392 | CC | denotes | and |
T3924 | 393-398 | EX | denotes | there |
T3925 | 399-402 | VBD | denotes | was |
T3926 | 403-405 | DT | denotes | no |
T3927 | 433-441 | NN | denotes | activity |
T3928 | 406-416 | JJ | denotes | detectable |
T3929 | 417-418 | NN | denotes | μ |
T3930 | 425-432 | NN | denotes | calpain |
T3931 | 418-419 | HYPH | denotes | - |
T3932 | 420-422 | CC | denotes | or |
T3933 | 423-424 | NN | denotes | m |
T3934 | 424-425 | HYPH | denotes | - |
T3935 | 442-444 | IN | denotes | in |
T3936 | 445-450 | DT | denotes | these |
T3937 | 451-453 | CC | denotes | or |
T3938 | 454-461 | JJR | denotes | younger |
T3939 | 462-469 | NNS | denotes | embryos |
T3940 | 470-471 | -LRB- | denotes | [ |
T3941 | 471-473 | CD | denotes | 31 |
T3942 | 473-474 | -RRB- | denotes | ] |
T3943 | 474-475 | . | denotes | . |
T3944 | 475-808 | sentence | denotes | Capn4-/- murine embryonic fibroblasts (MEFs) could be cultured from these embryos, although they also lacked calpain activity as assessed by casein zymography or by the formation of characteristic spectrin breakdown products, and they displayed migration defects consistent with a role for calpain in release of focal adhesions [9]. |
T3945 | 476-481 | NN | denotes | Capn4 |
T3946 | 530-538 | VBN | denotes | cultured |
T3947 | 481-482 | SYM | denotes | - |
T3948 | 482-483 | HYPH | denotes | / |
T3949 | 483-484 | SYM | denotes | - |
T3950 | 485-491 | JJ | denotes | murine |
T3951 | 502-513 | NNS | denotes | fibroblasts |
T3952 | 492-501 | JJ | denotes | embryonic |
T3953 | 514-515 | -LRB- | denotes | ( |
T3954 | 515-519 | NNS | denotes | MEFs |
T3955 | 519-520 | -RRB- | denotes | ) |
T3956 | 521-526 | MD | denotes | could |
T3957 | 527-529 | VB | denotes | be |
T3958 | 539-543 | IN | denotes | from |
T3959 | 544-549 | DT | denotes | these |
T3960 | 550-557 | NNS | denotes | embryos |
T3961 | 557-559 | , | denotes | , |
T3962 | 559-567 | IN | denotes | although |
T3963 | 578-584 | VBD | denotes | lacked |
T3964 | 568-572 | PRP | denotes | they |
T3965 | 573-577 | RB | denotes | also |
T3966 | 585-592 | NN | denotes | calpain |
T3967 | 593-601 | NN | denotes | activity |
T3968 | 602-604 | IN | denotes | as |
T3969 | 605-613 | VBN | denotes | assessed |
T3970 | 614-616 | IN | denotes | by |
T3971 | 617-623 | NN | denotes | casein |
T3972 | 624-634 | NN | denotes | zymography |
T3973 | 635-637 | CC | denotes | or |
T3974 | 638-640 | IN | denotes | by |
T3975 | 641-644 | DT | denotes | the |
T3976 | 645-654 | NN | denotes | formation |
T3977 | 655-657 | IN | denotes | of |
T3978 | 658-672 | JJ | denotes | characteristic |
T3979 | 692-700 | NNS | denotes | products |
T3980 | 673-681 | NN | denotes | spectrin |
T3981 | 682-691 | NN | denotes | breakdown |
T3982 | 700-702 | , | denotes | , |
T3983 | 702-705 | CC | denotes | and |
T3984 | 706-710 | PRP | denotes | they |
T3985 | 711-720 | VBD | denotes | displayed |
T3986 | 721-730 | NN | denotes | migration |
T3987 | 731-738 | NNS | denotes | defects |
T3988 | 739-749 | JJ | denotes | consistent |
T3989 | 750-754 | IN | denotes | with |
T3990 | 755-756 | DT | denotes | a |
T3991 | 757-761 | NN | denotes | role |
T3992 | 762-765 | IN | denotes | for |
T3993 | 766-773 | NN | denotes | calpain |
T3994 | 774-776 | IN | denotes | in |
T3995 | 777-784 | NN | denotes | release |
T3996 | 785-787 | IN | denotes | of |
T3997 | 788-793 | JJ | denotes | focal |
T3998 | 794-803 | NNS | denotes | adhesions |
T3999 | 804-805 | -LRB- | denotes | [ |
T4000 | 805-806 | CD | denotes | 9 |
T4001 | 806-807 | -RRB- | denotes | ] |
T4002 | 807-808 | . | denotes | . |
T4003 | 808-987 | sentence | denotes | An independently derived Capn4 knockout, involving a more extensive deletion of the gene, resulted in an earlier embryonic lethality, apparently at a pre-implantation stage [32]. |
T4004 | 809-811 | DT | denotes | An |
T4005 | 840-848 | NN | denotes | knockout |
T4006 | 812-825 | RB | denotes | independently |
T4007 | 826-833 | VBN | denotes | derived |
T4008 | 834-839 | NN | denotes | Capn4 |
T4009 | 899-907 | VBD | denotes | resulted |
T4010 | 848-850 | , | denotes | , |
T4011 | 850-859 | VBG | denotes | involving |
T4012 | 860-861 | DT | denotes | a |
T4013 | 877-885 | NN | denotes | deletion |
T4014 | 862-866 | RBR | denotes | more |
T4015 | 867-876 | JJ | denotes | extensive |
T4016 | 886-888 | IN | denotes | of |
T4017 | 889-892 | DT | denotes | the |
T4018 | 893-897 | NN | denotes | gene |
T4019 | 897-899 | , | denotes | , |
T4020 | 908-910 | IN | denotes | in |
T4021 | 911-913 | DT | denotes | an |
T4022 | 932-941 | NN | denotes | lethality |
T4023 | 914-921 | JJR | denotes | earlier |
T4024 | 922-931 | JJ | denotes | embryonic |
T4025 | 941-943 | , | denotes | , |
T4026 | 943-953 | RB | denotes | apparently |
T4027 | 954-956 | IN | denotes | at |
T4028 | 957-958 | DT | denotes | a |
T4029 | 976-981 | NN | denotes | stage |
T4030 | 959-975 | JJ | denotes | pre-implantation |
T4031 | 982-983 | -LRB- | denotes | [ |
T4032 | 983-985 | CD | denotes | 32 |
T4033 | 985-986 | -RRB- | denotes | ] |
T4034 | 986-987 | . | denotes | . |
T4035 | 987-1304 | sentence | denotes | The different times of embryonic lethality suggested that the first reported Capn4-/- mice [31] were targeted with a hypomorphic mutation, which retained some small level of calpain activity, allowing for their survival to mid-gestation, while the second reported Capn4-/- mice [32] represented a true null mutation. |
T4036 | 988-991 | DT | denotes | The |
T4037 | 1002-1007 | NNS | denotes | times |
T4038 | 992-1001 | JJ | denotes | different |
T4039 | 1031-1040 | VBD | denotes | suggested |
T4040 | 1008-1010 | IN | denotes | of |
T4041 | 1011-1020 | JJ | denotes | embryonic |
T4042 | 1021-1030 | NN | denotes | lethality |
T4043 | 1041-1045 | IN | denotes | that |
T4044 | 1089-1097 | VBN | denotes | targeted |
T4045 | 1046-1049 | DT | denotes | the |
T4046 | 1074-1078 | NNS | denotes | mice |
T4047 | 1050-1055 | JJ | denotes | first |
T4048 | 1056-1064 | VBN | denotes | reported |
T4049 | 1065-1070 | NN | denotes | Capn4 |
T4050 | 1070-1071 | SYM | denotes | - |
T4051 | 1071-1072 | HYPH | denotes | / |
T4052 | 1072-1073 | SYM | denotes | - |
T4053 | 1079-1080 | -LRB- | denotes | [ |
T4054 | 1080-1082 | CD | denotes | 31 |
T4055 | 1082-1083 | -RRB- | denotes | ] |
T4056 | 1084-1088 | VBD | denotes | were |
T4057 | 1098-1102 | IN | denotes | with |
T4058 | 1103-1104 | DT | denotes | a |
T4059 | 1117-1125 | NN | denotes | mutation |
T4060 | 1105-1116 | JJ | denotes | hypomorphic |
T4061 | 1125-1127 | , | denotes | , |
T4062 | 1127-1132 | WDT | denotes | which |
T4063 | 1133-1141 | VBD | denotes | retained |
T4064 | 1142-1146 | DT | denotes | some |
T4065 | 1153-1158 | NN | denotes | level |
T4066 | 1147-1152 | JJ | denotes | small |
T4067 | 1159-1161 | IN | denotes | of |
T4068 | 1162-1169 | NN | denotes | calpain |
T4069 | 1170-1178 | NN | denotes | activity |
T4070 | 1178-1180 | , | denotes | , |
T4071 | 1180-1188 | VBG | denotes | allowing |
T4072 | 1189-1192 | IN | denotes | for |
T4073 | 1193-1198 | PRP$ | denotes | their |
T4074 | 1199-1207 | NN | denotes | survival |
T4075 | 1208-1210 | IN | denotes | to |
T4076 | 1211-1224 | NN | denotes | mid-gestation |
T4077 | 1224-1226 | , | denotes | , |
T4078 | 1226-1231 | IN | denotes | while |
T4079 | 1271-1282 | VBD | denotes | represented |
T4080 | 1232-1235 | DT | denotes | the |
T4081 | 1261-1265 | NNS | denotes | mice |
T4082 | 1236-1242 | JJ | denotes | second |
T4083 | 1243-1251 | VBN | denotes | reported |
T4084 | 1252-1257 | NN | denotes | Capn4 |
T4085 | 1257-1258 | SYM | denotes | - |
T4086 | 1258-1259 | HYPH | denotes | / |
T4087 | 1259-1260 | SYM | denotes | - |
T4088 | 1266-1267 | -LRB- | denotes | [ |
T4089 | 1267-1269 | CD | denotes | 32 |
T4090 | 1269-1270 | -RRB- | denotes | ] |
T4091 | 1283-1284 | DT | denotes | a |
T4092 | 1295-1303 | NN | denotes | mutation |
T4093 | 1285-1289 | JJ | denotes | true |
T4094 | 1290-1294 | JJ | denotes | null |
T4095 | 1303-1304 | . | denotes | . |
T4096 | 1304-1538 | sentence | denotes | Disruption of Capn1, encoding the μ-calpain catalytic subunit, was subsequently reported to result in fertile, viable mice with some mild defects in the μ-calpain rich platelets relating to their aggregation and clot retraction [33]. |
T4097 | 1305-1315 | NN | denotes | Disruption |
T4098 | 1385-1393 | VBN | denotes | reported |
T4099 | 1316-1318 | IN | denotes | of |
T4100 | 1319-1324 | NN | denotes | Capn1 |
T4101 | 1324-1326 | , | denotes | , |
T4102 | 1326-1334 | VBG | denotes | encoding |
T4103 | 1335-1338 | DT | denotes | the |
T4104 | 1359-1366 | NN | denotes | subunit |
T4105 | 1339-1340 | NN | denotes | μ |
T4106 | 1341-1348 | NN | denotes | calpain |
T4107 | 1340-1341 | HYPH | denotes | - |
T4108 | 1349-1358 | JJ | denotes | catalytic |
T4109 | 1366-1368 | , | denotes | , |
T4110 | 1368-1371 | VBD | denotes | was |
T4111 | 1372-1384 | RB | denotes | subsequently |
T4112 | 1394-1396 | TO | denotes | to |
T4113 | 1397-1403 | VB | denotes | result |
T4114 | 1404-1406 | IN | denotes | in |
T4115 | 1407-1414 | JJ | denotes | fertile |
T4116 | 1423-1427 | NNS | denotes | mice |
T4117 | 1414-1416 | , | denotes | , |
T4118 | 1416-1422 | JJ | denotes | viable |
T4119 | 1428-1432 | IN | denotes | with |
T4120 | 1433-1437 | DT | denotes | some |
T4121 | 1443-1450 | NNS | denotes | defects |
T4122 | 1438-1442 | JJ | denotes | mild |
T4123 | 1451-1453 | IN | denotes | in |
T4124 | 1454-1457 | DT | denotes | the |
T4125 | 1473-1482 | NNS | denotes | platelets |
T4126 | 1458-1459 | NN | denotes | μ |
T4127 | 1460-1467 | NN | denotes | calpain |
T4128 | 1459-1460 | HYPH | denotes | - |
T4129 | 1468-1472 | JJ | denotes | rich |
T4130 | 1483-1491 | VBG | denotes | relating |
T4131 | 1492-1494 | IN | denotes | to |
T4132 | 1495-1500 | PRP$ | denotes | their |
T4133 | 1501-1512 | NN | denotes | aggregation |
T4134 | 1513-1516 | CC | denotes | and |
T4135 | 1517-1521 | NN | denotes | clot |
T4136 | 1522-1532 | NN | denotes | retraction |
T4137 | 1533-1534 | -LRB- | denotes | [ |
T4138 | 1534-1536 | CD | denotes | 33 |
T4139 | 1536-1537 | -RRB- | denotes | ] |
T4140 | 1537-1538 | . | denotes | . |
T4141 | 1538-1686 | sentence | denotes | The fact that Capn4 null mice die during embryogenesis indicates that at least one of the ubiquitous calpains is essential for development to term. |
T4142 | 1539-1542 | DT | denotes | The |
T4143 | 1543-1547 | NN | denotes | fact |
T4144 | 1594-1603 | VBZ | denotes | indicates |
T4145 | 1548-1552 | IN | denotes | that |
T4146 | 1569-1572 | VBP | denotes | die |
T4147 | 1553-1558 | NN | denotes | Capn4 |
T4148 | 1559-1563 | JJ | denotes | null |
T4149 | 1564-1568 | NNS | denotes | mice |
T4150 | 1573-1579 | IN | denotes | during |
T4151 | 1580-1593 | NN | denotes | embryogenesis |
T4152 | 1604-1608 | IN | denotes | that |
T4153 | 1649-1651 | VBZ | denotes | is |
T4154 | 1609-1611 | RB | denotes | at |
T4155 | 1618-1621 | CD | denotes | one |
T4156 | 1612-1617 | RBS | denotes | least |
T4157 | 1622-1624 | IN | denotes | of |
T4158 | 1625-1628 | DT | denotes | the |
T4159 | 1640-1648 | NNS | denotes | calpains |
T4160 | 1629-1639 | JJ | denotes | ubiquitous |
T4161 | 1652-1661 | JJ | denotes | essential |
T4162 | 1662-1665 | IN | denotes | for |
T4163 | 1666-1677 | NN | denotes | development |
T4164 | 1678-1680 | IN | denotes | to |
T4165 | 1681-1685 | NN | denotes | term |
T4166 | 1685-1686 | . | denotes | . |
T4167 | 1686-1949 | sentence | denotes | The viability of Capn1-deficient mice does not however distinguish between two possibilities: either that m-calpain is specifically required during embryogenesis, or that either form of calpain alone is sufficient and can compensate for the absence of the other. |
T4168 | 1687-1690 | DT | denotes | The |
T4169 | 1691-1700 | NN | denotes | viability |
T4170 | 1742-1753 | VB | denotes | distinguish |
T4171 | 1701-1703 | IN | denotes | of |
T4172 | 1704-1709 | NN | denotes | Capn1 |
T4173 | 1710-1719 | JJ | denotes | deficient |
T4174 | 1709-1710 | HYPH | denotes | - |
T4175 | 1720-1724 | NNS | denotes | mice |
T4176 | 1725-1729 | VBZ | denotes | does |
T4177 | 1730-1733 | RB | denotes | not |
T4178 | 1734-1741 | RB | denotes | however |
T4179 | 1754-1761 | IN | denotes | between |
T4180 | 1762-1765 | CD | denotes | two |
T4181 | 1766-1779 | NNS | denotes | possibilities |
T4182 | 1779-1781 | : | denotes | : |
T4183 | 1781-1787 | CC | denotes | either |
T4184 | 1819-1827 | VBN | denotes | required |
T4185 | 1788-1792 | IN | denotes | that |
T4186 | 1793-1794 | NN | denotes | m |
T4187 | 1795-1802 | NN | denotes | calpain |
T4188 | 1794-1795 | HYPH | denotes | - |
T4189 | 1803-1805 | VBZ | denotes | is |
T4190 | 1806-1818 | RB | denotes | specifically |
T4191 | 1828-1834 | IN | denotes | during |
T4192 | 1835-1848 | NN | denotes | embryogenesis |
T4193 | 1848-1850 | , | denotes | , |
T4194 | 1850-1852 | CC | denotes | or |
T4195 | 1853-1857 | IN | denotes | that |
T4196 | 1887-1889 | VBZ | denotes | is |
T4197 | 1858-1864 | CC | denotes | either |
T4198 | 1865-1869 | NN | denotes | form |
T4199 | 1870-1872 | IN | denotes | of |
T4200 | 1873-1880 | NN | denotes | calpain |
T4201 | 1881-1886 | RB | denotes | alone |
T4202 | 1890-1900 | JJ | denotes | sufficient |
T4203 | 1901-1904 | CC | denotes | and |
T4204 | 1905-1908 | MD | denotes | can |
T4205 | 1909-1919 | VB | denotes | compensate |
T4206 | 1920-1923 | IN | denotes | for |
T4207 | 1924-1927 | DT | denotes | the |
T4208 | 1928-1935 | NN | denotes | absence |
T4209 | 1936-1938 | IN | denotes | of |
T4210 | 1939-1942 | DT | denotes | the |
T4211 | 1943-1948 | JJ | denotes | other |
T4212 | 1948-1949 | . | denotes | . |
T4213 | 1949-2051 | sentence | denotes | To resolve this question, we have now knocked out the Capn2 gene encoding the m-80 k subunit in mice. |
T4214 | 1950-1952 | TO | denotes | To |
T4215 | 1953-1960 | VB | denotes | resolve |
T4216 | 1988-1995 | VBN | denotes | knocked |
T4217 | 1961-1965 | DT | denotes | this |
T4218 | 1966-1974 | NN | denotes | question |
T4219 | 1974-1976 | , | denotes | , |
T4220 | 1976-1978 | PRP | denotes | we |
T4221 | 1979-1983 | VBP | denotes | have |
T4222 | 1984-1987 | RB | denotes | now |
T4223 | 1996-1999 | RP | denotes | out |
T4224 | 2000-2003 | DT | denotes | the |
T4225 | 2010-2014 | NN | denotes | gene |
T4226 | 2004-2009 | NN | denotes | Capn2 |
T4227 | 2015-2023 | VBG | denotes | encoding |
T4228 | 2024-2027 | DT | denotes | the |
T4229 | 2035-2042 | NN | denotes | subunit |
T4230 | 2028-2029 | NN | denotes | m |
T4231 | 2033-2034 | NN | denotes | k |
T4232 | 2029-2030 | HYPH | denotes | - |
T4233 | 2030-2032 | CD | denotes | 80 |
T4234 | 2043-2045 | IN | denotes | in |
T4235 | 2046-2050 | NNS | denotes | mice |
T4236 | 2050-2051 | . | denotes | . |
T4237 | 2051-2196 | sentence | denotes | We report here that Capn2 null embryos died prior to the implantation stage, indicating that m-calpain is indispensable for early embryogenesis. |
T4238 | 2052-2054 | PRP | denotes | We |
T4239 | 2055-2061 | VBP | denotes | report |
T4240 | 2062-2066 | RB | denotes | here |
T4241 | 2067-2071 | IN | denotes | that |
T4242 | 2091-2095 | VBD | denotes | died |
T4243 | 2072-2077 | NN | denotes | Capn2 |
T4244 | 2078-2082 | JJ | denotes | null |
T4245 | 2083-2090 | NNS | denotes | embryos |
T4246 | 2096-2101 | JJ | denotes | prior |
T4247 | 2102-2104 | IN | denotes | to |
T4248 | 2105-2108 | DT | denotes | the |
T4249 | 2122-2127 | NN | denotes | stage |
T4250 | 2109-2121 | NN | denotes | implantation |
T4251 | 2127-2129 | , | denotes | , |
T4252 | 2129-2139 | VBG | denotes | indicating |
T4253 | 2140-2144 | IN | denotes | that |
T4254 | 2155-2157 | VBZ | denotes | is |
T4255 | 2145-2146 | NN | denotes | m |
T4256 | 2147-2154 | NN | denotes | calpain |
T4257 | 2146-2147 | HYPH | denotes | - |
T4258 | 2158-2171 | JJ | denotes | indispensable |
T4259 | 2172-2175 | IN | denotes | for |
T4260 | 2176-2181 | JJ | denotes | early |
T4261 | 2182-2195 | NN | denotes | embryogenesis |
T4262 | 2195-2196 | . | denotes | . |
T4263 | 2196-2350 | sentence | denotes | This role cannot be fulfilled by μ-calpain, which is expressed in embryonic stem (ES) cells [31] and is assumed to be present at this stage of gestation. |
T4264 | 2197-2201 | DT | denotes | This |
T4265 | 2202-2206 | NN | denotes | role |
T4266 | 2217-2226 | VBN | denotes | fulfilled |
T4267 | 2207-2210 | MD | denotes | can |
T4268 | 2210-2213 | RB | denotes | not |
T4269 | 2214-2216 | VB | denotes | be |
T4270 | 2227-2229 | IN | denotes | by |
T4271 | 2230-2231 | NN | denotes | μ |
T4272 | 2232-2239 | NN | denotes | calpain |
T4273 | 2231-2232 | HYPH | denotes | - |
T4274 | 2239-2241 | , | denotes | , |
T4275 | 2241-2246 | WDT | denotes | which |
T4276 | 2250-2259 | VBN | denotes | expressed |
T4277 | 2247-2249 | VBZ | denotes | is |
T4278 | 2260-2262 | IN | denotes | in |
T4279 | 2263-2272 | JJ | denotes | embryonic |
T4280 | 2273-2277 | NN | denotes | stem |
T4281 | 2283-2288 | NNS | denotes | cells |
T4282 | 2278-2279 | -LRB- | denotes | ( |
T4283 | 2279-2281 | NN | denotes | ES |
T4284 | 2281-2282 | -RRB- | denotes | ) |
T4285 | 2289-2290 | -LRB- | denotes | [ |
T4286 | 2290-2292 | CD | denotes | 31 |
T4287 | 2292-2293 | -RRB- | denotes | ] |
T4288 | 2294-2297 | CC | denotes | and |
T4289 | 2298-2300 | VBZ | denotes | is |
T4290 | 2301-2308 | VBN | denotes | assumed |
T4291 | 2309-2311 | TO | denotes | to |
T4292 | 2312-2314 | VB | denotes | be |
T4293 | 2315-2322 | JJ | denotes | present |
T4294 | 2323-2325 | IN | denotes | at |
T4295 | 2326-2330 | DT | denotes | this |
T4296 | 2331-2336 | NN | denotes | stage |
T4297 | 2337-2339 | IN | denotes | of |
T4298 | 2340-2349 | NN | denotes | gestation |
T4299 | 2349-2350 | . | denotes | . |
T4300 | 2350-2473 | sentence | denotes | This demonstrates unequivocally that m-calpain and μ-calpain have distinct physiological roles during early embryogenesis. |
T4301 | 2351-2355 | DT | denotes | This |
T4302 | 2356-2368 | VBZ | denotes | demonstrates |
T4303 | 2369-2382 | RB | denotes | unequivocally |
T4304 | 2383-2387 | IN | denotes | that |
T4305 | 2412-2416 | VBP | denotes | have |
T4306 | 2388-2389 | NN | denotes | m |
T4307 | 2390-2397 | NN | denotes | calpain |
T4308 | 2389-2390 | HYPH | denotes | - |
T4309 | 2398-2401 | CC | denotes | and |
T4310 | 2402-2403 | NN | denotes | μ |
T4311 | 2404-2411 | NN | denotes | calpain |
T4312 | 2403-2404 | HYPH | denotes | - |
T4313 | 2417-2425 | JJ | denotes | distinct |
T4314 | 2440-2445 | NNS | denotes | roles |
T4315 | 2426-2439 | JJ | denotes | physiological |
T4316 | 2446-2452 | IN | denotes | during |
T4317 | 2453-2458 | JJ | denotes | early |
T4318 | 2459-2472 | NN | denotes | embryogenesis |
T4319 | 2472-2473 | . | denotes | . |
R804 | T3849 | T3850 | amod | Targeted,deletion |
R807 | T3850 | T3852 | nsubj | deletion,provides |
R809 | T3851 | T3850 | compound | gene,deletion |
R810 | T3853 | T3850 | prep | in,deletion |
R812 | T3854 | T3853 | pobj | mice,in |
R813 | T3855 | T3856 | det | a,approach |
R815 | T3856 | T3852 | dobj | approach,provides |
R817 | T3857 | T3856 | amod | powerful,approach |
R818 | T3858 | T3856 | prep | to,approach |
R819 | T3859 | T3858 | pcomp | determining,to |
R820 | T3860 | T3861 | det | the,roles |
R822 | T3861 | T3859 | dobj | roles,determining |
R823 | T3862 | T3861 | amod | physiological,roles |
R824 | T3863 | T3861 | prep | of,roles |
R826 | T3864 | T3865 | nmod | μ,calpain |
R827 | T3865 | T3863 | pobj | calpain,of |
R829 | T3866 | T3864 | punct | -,μ |
R830 | T3867 | T3864 | cc | and,μ |
R831 | T3868 | T3864 | conj | m,μ |
R833 | T3869 | T3865 | punct | -,calpain |
R834 | T3870 | T3856 | cc | and,approach |
R835 | T3871 | T3872 | det | the,opportunity |
R837 | T3872 | T3856 | conj | opportunity,approach |
R838 | T3873 | T3874 | aux | to,approach |
R840 | T3874 | T3872 | acl | approach,opportunity |
R841 | T3875 | T3876 | poss | their,functions |
R842 | T3876 | T3874 | dobj | functions,approach |
R843 | T3877 | T3878 | npadvmod | isoform,specific |
R844 | T3878 | T3876 | amod | specific,functions |
R845 | T3879 | T3852 | punct | .,provides |
R847 | T3881 | T3882 | amod | Initial,studies |
R848 | T3882 | T3883 | nsubj | studies,targeted |
R850 | T3884 | T3883 | dobj | Capn4,targeted |
R851 | T3885 | T3883 | prep | based,targeted |
R853 | T3886 | T3885 | prep | on,based |
R854 | T3887 | T3888 | det | the,prediction |
R855 | T3888 | T3886 | pobj | prediction,on |
R856 | T3889 | T3890 | mark | that,abolish |
R858 | T3890 | T3888 | acl | abolish,prediction |
R860 | T3891 | T3890 | nsubj | loss,abolish |
R861 | T3892 | T3891 | prep | of,loss |
R862 | T3893 | T3894 | det | this,subunit |
R863 | T3894 | T3892 | pobj | subunit,of |
R865 | T3895 | T3894 | compound | calpain,subunit |
R866 | T3896 | T3890 | aux | would,abolish |
R868 | T3897 | T3890 | dobj | activity,abolish |
R870 | T3898 | T3897 | prep | of,activity |
R871 | T3899 | T3900 | preconj | both,μ |
R873 | T3900 | T3901 | nmod | μ,calpain |
R874 | T3901 | T3898 | pobj | calpain,of |
R876 | T3902 | T3900 | punct | -,μ |
R877 | T3903 | T3900 | cc | and,μ |
R878 | T3904 | T3900 | conj | m,μ |
R880 | T3905 | T3901 | punct | -,calpain |
R881 | T3906 | T3883 | punct | .,targeted |
R882 | T3908 | T3909 | nmod | Capn4,embryos |
R884 | T3909 | T3914 | nsubj | embryos,died |
R885 | T3910 | T3908 | punct | -,Capn4 |
R886 | T3911 | T3908 | punct | /,Capn4 |
R888 | T3912 | T3908 | punct | -,Capn4 |
R889 | T3913 | T3909 | amod | murine,embryos |
R891 | T3915 | T3914 | prep | between,died |
R892 | T3916 | T3917 | nmod | days,10 |
R894 | T3917 | T3915 | pobj | 10,between |
R895 | T3918 | T3917 | cc | and,10 |
R896 | T3919 | T3917 | conj | 11,10 |
R897 | T3920 | T3917 | prep | of,10 |
R898 | T3921 | T3920 | pobj | gestation,of |
R899 | T3922 | T3914 | punct | ", ",died |
R901 | T3923 | T3914 | cc | and,died |
R902 | T3924 | T3925 | expl | there,was |
R903 | T3925 | T3914 | conj | was,died |
R905 | T3926 | T3927 | det | no,activity |
R906 | T3927 | T3925 | attr | activity,was |
R907 | T3928 | T3927 | amod | detectable,activity |
R909 | T3929 | T3930 | nmod | μ,calpain |
R910 | T3930 | T3927 | compound | calpain,activity |
R911 | T3931 | T3929 | punct | -,μ |
R913 | T3932 | T3929 | cc | or,μ |
R914 | T3933 | T3929 | conj | m,μ |
R916 | T3934 | T3930 | punct | -,calpain |
R917 | T3935 | T3925 | prep | in,was |
R918 | T3936 | T3935 | pobj | these,in |
R919 | T3937 | T3936 | cc | or,these |
R921 | T3938 | T3939 | amod | younger,embryos |
R922 | T3939 | T3936 | conj | embryos,these |
R924 | T3940 | T3941 | punct | [,31 |
R925 | T3941 | T3925 | parataxis | 31,was |
R926 | T3942 | T3941 | punct | ],31 |
R928 | T3943 | T3925 | punct | .,was |
R929 | T3945 | T3946 | nsubjpass | Capn4,cultured |
R931 | T3947 | T3945 | punct | -,Capn4 |
R932 | T3948 | T3945 | punct | /,Capn4 |
R934 | T3949 | T3945 | punct | -,Capn4 |
R935 | T3950 | T3951 | amod | murine,fibroblasts |
R938 | T3951 | T3945 | appos | fibroblasts,Capn4 |
R940 | T3952 | T3951 | amod | embryonic,fibroblasts |
R942 | T3953 | T3951 | punct | (,fibroblasts |
R943 | T3954 | T3951 | appos | MEFs,fibroblasts |
R946 | T3955 | T3946 | punct | ),cultured |
R948 | T3956 | T3946 | aux | could,cultured |
R949 | T3957 | T3946 | auxpass | be,cultured |
R950 | T3958 | T3946 | prep | from,cultured |
R951 | T3959 | T3960 | det | these,embryos |
R952 | T3960 | T3958 | pobj | embryos,from |
R953 | T3961 | T3946 | punct | ", ",cultured |
R954 | T3962 | T3963 | mark | although,lacked |
R956 | T3963 | T3946 | advcl | lacked,cultured |
R957 | T3964 | T3963 | nsubj | they,lacked |
R958 | T3965 | T3963 | advmod | also,lacked |
R960 | T3966 | T3967 | compound | calpain,activity |
R961 | T3967 | T3963 | dobj | activity,lacked |
R962 | T3968 | T3969 | mark | as,assessed |
R963 | T3969 | T3963 | advcl | assessed,lacked |
R965 | T3970 | T3969 | prep | by,assessed |
R966 | T3971 | T3972 | compound | casein,zymography |
R967 | T3972 | T3970 | pobj | zymography,by |
R969 | T3973 | T3970 | cc | or,by |
R970 | T3974 | T3970 | conj | by,by |
R972 | T3975 | T3976 | det | the,formation |
R973 | T3976 | T3974 | pobj | formation,by |
R975 | T3977 | T3976 | prep | of,formation |
R976 | T3978 | T3979 | amod | characteristic,products |
R977 | T3979 | T3977 | pobj | products,of |
R979 | T3980 | T3981 | compound | spectrin,breakdown |
R980 | T3981 | T3979 | compound | breakdown,products |
R983 | T3982 | T3963 | punct | ", ",lacked |
R984 | T3983 | T3963 | cc | and,lacked |
R986 | T3984 | T3985 | nsubj | they,displayed |
R987 | T3985 | T3963 | conj | displayed,lacked |
R988 | T3986 | T3987 | compound | migration,defects |
R990 | T3987 | T3985 | dobj | defects,displayed |
R991 | T3988 | T3987 | amod | consistent,defects |
R992 | T3989 | T3988 | prep | with,consistent |
R994 | T3990 | T3991 | det | a,role |
R995 | T3991 | T3989 | pobj | role,with |
R997 | T3992 | T3991 | prep | for,role |
R998 | T3993 | T3992 | pobj | calpain,for |
R999 | T3994 | T3991 | prep | in,role |
R1000 | T3995 | T3994 | pobj | release,in |
R1001 | T3996 | T3995 | prep | of,release |
R1002 | T3997 | T3998 | amod | focal,adhesions |
R1003 | T4061 | T4059 | punct | ", ",mutation |
R1004 | T3998 | T3996 | pobj | adhesions,of |
R1005 | T3999 | T4000 | punct | [,9 |
R1006 | T4000 | T3985 | parataxis | 9,displayed |
R1007 | T4001 | T4000 | punct | ],9 |
R1008 | T4002 | T3946 | punct | .,cultured |
R1009 | T4062 | T4063 | dep | which,retained |
R1010 | T4004 | T4005 | det | An,knockout |
R1011 | T4005 | T4009 | nsubj | knockout,resulted |
R1012 | T4063 | T4059 | relcl | retained,mutation |
R1013 | T4006 | T4007 | advmod | independently,derived |
R1014 | T4007 | T4005 | amod | derived,knockout |
R1015 | T4008 | T4005 | compound | Capn4,knockout |
R1016 | T4064 | T4065 | det | some,level |
R1017 | T4010 | T4005 | punct | ", ",knockout |
R1018 | T4011 | T4005 | prep | involving,knockout |
R1019 | T4065 | T4063 | dobj | level,retained |
R1020 | T4012 | T4013 | det | a,deletion |
R1021 | T4013 | T4011 | pobj | deletion,involving |
R1022 | T4014 | T4015 | advmod | more,extensive |
R1023 | T4066 | T4065 | amod | small,level |
R1024 | T4015 | T4013 | amod | extensive,deletion |
R1025 | T4016 | T4013 | prep | of,deletion |
R1026 | T4067 | T4065 | prep | of,level |
R1027 | T4017 | T4018 | det | the,gene |
R1028 | T4018 | T4016 | pobj | gene,of |
R1029 | T4019 | T4009 | punct | ", ",resulted |
R1030 | T4020 | T4009 | prep | in,resulted |
R1031 | T4068 | T4069 | compound | calpain,activity |
R1032 | T4021 | T4022 | det | an,lethality |
R1033 | T4022 | T4020 | pobj | lethality,in |
R1034 | T4069 | T4067 | pobj | activity,of |
R1035 | T4023 | T4022 | amod | earlier,lethality |
R1036 | T4024 | T4022 | amod | embryonic,lethality |
R1037 | T4025 | T4009 | punct | ", ",resulted |
R1038 | T4070 | T4044 | punct | ", ",targeted |
R1039 | T4026 | T4027 | advmod | apparently,at |
R1040 | T4027 | T4009 | prep | at,resulted |
R1041 | T4028 | T4029 | det | a,stage |
R1042 | T4029 | T4027 | pobj | stage,at |
R1043 | T4071 | T4044 | advcl | allowing,targeted |
R1044 | T4030 | T4029 | amod | pre-implantation,stage |
R1045 | T4031 | T4032 | punct | [,32 |
R1046 | T4032 | T4009 | parataxis | 32,resulted |
R1047 | T4072 | T4071 | prep | for,allowing |
R1048 | T4033 | T4032 | punct | ],32 |
R1049 | T4034 | T4009 | punct | .,resulted |
R1050 | T4073 | T4074 | poss | their,survival |
R1051 | T4036 | T4037 | det | The,times |
R1052 | T4037 | T4039 | nsubj | times,suggested |
R1053 | T4038 | T4037 | amod | different,times |
R1054 | T4040 | T4037 | prep | of,times |
R1055 | T4074 | T4072 | pobj | survival,for |
R1056 | T4041 | T4042 | amod | embryonic,lethality |
R1057 | T4042 | T4040 | pobj | lethality,of |
R1058 | T4043 | T4044 | mark | that,targeted |
R1060 | T4044 | T4039 | ccomp | targeted,suggested |
R1061 | T4045 | T4046 | det | the,mice |
R1062 | T4046 | T4044 | nsubjpass | mice,targeted |
R1063 | T4076 | T4075 | pobj | mid-gestation,to |
R1064 | T4047 | T4046 | amod | first,mice |
R1065 | T4048 | T4046 | amod | reported,mice |
R1066 | T4077 | T4044 | punct | ", ",targeted |
R1067 | T4078 | T4079 | mark | while,represented |
R1068 | T4079 | T4044 | advcl | represented,targeted |
R1069 | T4080 | T4081 | det | the,mice |
R1071 | T4082 | T4081 | amod | second,mice |
R1072 | T4083 | T4081 | amod | reported,mice |
R1073 | T4084 | T4081 | nmod | Capn4,mice |
R1074 | T4085 | T4084 | punct | -,Capn4 |
R1075 | T4086 | T4084 | punct | /,Capn4 |
R1076 | T4087 | T4084 | punct | -,Capn4 |
R1077 | T4088 | T4089 | punct | [,32 |
R1078 | T4049 | T4046 | nmod | Capn4,mice |
R1079 | T4089 | T4081 | parataxis | 32,mice |
R1080 | T4090 | T4089 | punct | ],32 |
R1081 | T4050 | T4049 | punct | -,Capn4 |
R1082 | T4091 | T4092 | det | a,mutation |
R1083 | T4051 | T4049 | punct | /,Capn4 |
R1084 | T4052 | T4049 | punct | -,Capn4 |
R1085 | T4092 | T4079 | dobj | mutation,represented |
R1086 | T4053 | T4054 | punct | [,31 |
R1087 | T4054 | T4046 | parataxis | 31,mice |
R1088 | T4093 | T4092 | amod | true,mutation |
R1089 | T4055 | T4054 | punct | ],31 |
R1090 | T4094 | T4092 | amod | null,mutation |
R1091 | T4056 | T4044 | auxpass | were,targeted |
R1092 | T4057 | T4044 | prep | with,targeted |
R1093 | T4058 | T4059 | det | a,mutation |
R1094 | T4095 | T4039 | punct | .,suggested |
R1095 | T4059 | T4057 | pobj | mutation,with |
R1096 | T4060 | T4059 | amod | hypomorphic,mutation |
R1097 | T4097 | T4098 | nsubjpass | Disruption,reported |
R1098 | T4099 | T4097 | prep | of,Disruption |
R1099 | T4100 | T4099 | pobj | Capn1,of |
R1100 | T4101 | T4097 | punct | ", ",Disruption |
R1101 | T4102 | T4097 | acl | encoding,Disruption |
R1102 | T4168 | T4169 | det | The,viability |
R1103 | T4169 | T4170 | nsubj | viability,distinguish |
R1104 | T4171 | T4169 | prep | of,viability |
R1105 | T4172 | T4173 | npadvmod | Capn1,deficient |
R1106 | T4173 | T4175 | amod | deficient,mice |
R1107 | T4174 | T4173 | punct | -,deficient |
R1108 | T4103 | T4104 | det | the,subunit |
R1109 | T4175 | T4171 | pobj | mice,of |
R1110 | T4176 | T4170 | aux | does,distinguish |
R1111 | T4177 | T4170 | neg | not,distinguish |
R1112 | T4104 | T4102 | dobj | subunit,encoding |
R1113 | T4178 | T4170 | advmod | however,distinguish |
R1114 | T4179 | T4170 | prep | between,distinguish |
R1115 | T4180 | T4181 | nummod | two,possibilities |
R1116 | T4105 | T4106 | nmod | μ,calpain |
R1117 | T4181 | T4179 | pobj | possibilities,between |
R1118 | T4182 | T4181 | punct | : ,possibilities |
R1119 | T4106 | T4104 | nmod | calpain,subunit |
R1120 | T4183 | T4184 | preconj | either,required |
R1121 | T4184 | T4181 | advcl | required,possibilities |
R1122 | T4185 | T4184 | mark | that,required |
R1123 | T4107 | T4106 | punct | -,calpain |
R1124 | T4186 | T4187 | compound | m,calpain |
R1125 | T4187 | T4184 | nsubjpass | calpain,required |
R1126 | T4188 | T4187 | punct | -,calpain |
R1127 | T4108 | T4104 | amod | catalytic,subunit |
R1128 | T4189 | T4184 | auxpass | is,required |
R1129 | T4190 | T4184 | advmod | specifically,required |
R1130 | T4109 | T4098 | punct | ", ",reported |
R1131 | T4191 | T4184 | prep | during,required |
R1132 | T4192 | T4191 | pobj | embryogenesis,during |
R1133 | T4193 | T4184 | punct | ", ",required |
R1134 | T4110 | T4098 | auxpass | was,reported |
R1135 | T4194 | T4184 | cc | or,required |
R1136 | T4195 | T4196 | mark | that,is |
R1137 | T4196 | T4184 | conj | is,required |
R1138 | T4111 | T4098 | advmod | subsequently,reported |
R1139 | T4197 | T4198 | preconj | either,form |
R1140 | T4198 | T4196 | nsubj | form,is |
R1141 | T4199 | T4198 | prep | of,form |
R1142 | T4112 | T4113 | aux | to,result |
R1143 | T4200 | T4199 | pobj | calpain,of |
R1144 | T4201 | T4198 | advmod | alone,form |
R1145 | T4202 | T4196 | acomp | sufficient,is |
R1146 | T4113 | T4098 | xcomp | result,reported |
R1147 | T4203 | T4196 | cc | and,is |
R1148 | T4204 | T4205 | aux | can,compensate |
R1149 | T4114 | T4113 | prep | in,result |
R1150 | T4205 | T4196 | conj | compensate,is |
R1151 | T4206 | T4205 | prep | for,compensate |
R1152 | T4207 | T4208 | det | the,absence |
R1153 | T4115 | T4116 | amod | fertile,mice |
R1154 | T4208 | T4206 | pobj | absence,for |
R1155 | T4209 | T4208 | prep | of,absence |
R1156 | T4210 | T4211 | det | the,other |
R1157 | T4211 | T4209 | pobj | other,of |
R1158 | T4212 | T4170 | punct | .,distinguish |
R1159 | T4116 | T4114 | pobj | mice,in |
R1160 | T4214 | T4215 | aux | To,resolve |
R1161 | T4215 | T4216 | advcl | resolve,knocked |
R1162 | T4117 | T4116 | punct | ", ",mice |
R1163 | T4217 | T4218 | det | this,question |
R1164 | T4218 | T4215 | dobj | question,resolve |
R1165 | T4118 | T4116 | amod | viable,mice |
R1166 | T4219 | T4216 | punct | ", ",knocked |
R1167 | T4220 | T4216 | nsubj | we,knocked |
R1168 | T4221 | T4216 | aux | have,knocked |
R1169 | T4119 | T4116 | prep | with,mice |
R1170 | T4222 | T4216 | advmod | now,knocked |
R1171 | T4223 | T4216 | prt | out,knocked |
R1172 | T4224 | T4225 | det | the,gene |
R1173 | T4120 | T4121 | det | some,defects |
R1174 | T4225 | T4216 | dobj | gene,knocked |
R1175 | T4226 | T4225 | compound | Capn2,gene |
R1176 | T4227 | T4225 | acl | encoding,gene |
R1177 | T4121 | T4119 | pobj | defects,with |
R1178 | T4228 | T4229 | det | the,subunit |
R1179 | T4229 | T4227 | dobj | subunit,encoding |
R1180 | T4230 | T4231 | nmod | m,k |
R1181 | T4122 | T4121 | amod | mild,defects |
R1182 | T4231 | T4229 | compound | k,subunit |
R1183 | T4232 | T4231 | punct | -,k |
R1184 | T4233 | T4231 | nummod | 80,k |
R1185 | T4123 | T4121 | prep | in,defects |
R1186 | T4234 | T4227 | prep | in,encoding |
R1187 | T4124 | T4125 | det | the,platelets |
R1188 | T4125 | T4123 | pobj | platelets,in |
R1189 | T4126 | T4127 | compound | μ,calpain |
R1190 | T4235 | T4234 | pobj | mice,in |
R1191 | T4236 | T4216 | punct | .,knocked |
R1192 | T4127 | T4129 | npadvmod | calpain,rich |
R1193 | T4238 | T4239 | nsubj | We,report |
R1194 | T4128 | T4127 | punct | -,calpain |
R1195 | T4240 | T4239 | advmod | here,report |
R1196 | T4241 | T4242 | mark | that,died |
R1197 | T4242 | T4239 | ccomp | died,report |
R1198 | T4129 | T4125 | amod | rich,platelets |
R1199 | T4243 | T4244 | npadvmod | Capn2,null |
R1200 | T4244 | T4245 | amod | null,embryos |
R1201 | T4130 | T4121 | acl | relating,defects |
R1202 | T4245 | T4242 | nsubj | embryos,died |
R1203 | T4246 | T4247 | amod | prior,to |
R1204 | T4131 | T4130 | prep | to,relating |
R1205 | T4247 | T4242 | prep | to,died |
R1206 | T4248 | T4249 | det | the,stage |
R1207 | T4249 | T4247 | pobj | stage,to |
R1208 | T4250 | T4249 | compound | implantation,stage |
R1209 | T4251 | T4242 | punct | ", ",died |
R1210 | T4252 | T4242 | advcl | indicating,died |
R1211 | T4132 | T4133 | poss | their,aggregation |
R1212 | T4253 | T4254 | mark | that,is |
R1213 | T4254 | T4252 | ccomp | is,indicating |
R1214 | T4255 | T4256 | compound | m,calpain |
R1215 | T4133 | T4131 | pobj | aggregation,to |
R1216 | T4256 | T4254 | nsubj | calpain,is |
R1217 | T4257 | T4256 | punct | -,calpain |
R1218 | T4258 | T4254 | acomp | indispensable,is |
R1219 | T4134 | T4133 | cc | and,aggregation |
R1220 | T4259 | T4258 | prep | for,indispensable |
R1221 | T4260 | T4261 | amod | early,embryogenesis |
R1222 | T4261 | T4259 | pobj | embryogenesis,for |
R1223 | T4135 | T4136 | compound | clot,retraction |
R1224 | T4262 | T4239 | punct | .,report |
R1225 | T4264 | T4265 | det | This,role |
R1226 | T4136 | T4133 | conj | retraction,aggregation |
R1227 | T4265 | T4266 | nsubjpass | role,fulfilled |
R1228 | T4267 | T4266 | aux | can,fulfilled |
R1229 | T4137 | T4138 | punct | [,33 |
R1230 | T4268 | T4266 | neg | not,fulfilled |
R1231 | T4269 | T4266 | auxpass | be,fulfilled |
R1232 | T4270 | T4266 | agent | by,fulfilled |
R1233 | T4138 | T4098 | parataxis | 33,reported |
R1234 | T4271 | T4272 | compound | μ,calpain |
R1235 | T4272 | T4270 | pobj | calpain,by |
R1236 | T4139 | T4138 | punct | ],33 |
R1237 | T4140 | T4098 | punct | .,reported |
R1238 | T4142 | T4143 | det | The,fact |
R1239 | T4273 | T4272 | punct | -,calpain |
R1240 | T4274 | T4272 | punct | ", ",calpain |
R1241 | T4275 | T4276 | dep | which,expressed |
R1242 | T4143 | T4144 | nsubj | fact,indicates |
R1243 | T4276 | T4272 | relcl | expressed,calpain |
R1244 | T4277 | T4276 | auxpass | is,expressed |
R1245 | T4278 | T4276 | prep | in,expressed |
R1246 | T4145 | T4146 | mark | that,die |
R1247 | T4279 | T4280 | amod | embryonic,stem |
R1248 | T4280 | T4281 | nmod | stem,cells |
R1249 | T4281 | T4278 | pobj | cells,in |
R1250 | T4282 | T4280 | punct | (,stem |
R1251 | T4146 | T4143 | acl | die,fact |
R1252 | T4283 | T4280 | appos | ES,stem |
R1253 | T4284 | T4281 | punct | ),cells |
R1254 | T4285 | T4286 | punct | [,31 |
R1255 | T4147 | T4148 | npadvmod | Capn4,null |
R1256 | T4286 | T4276 | parataxis | 31,expressed |
R1257 | T4287 | T4286 | punct | ],31 |
R1258 | T4288 | T4276 | cc | and,expressed |
R1259 | T4148 | T4149 | amod | null,mice |
R1260 | T4289 | T4290 | auxpass | is,assumed |
R1261 | T4290 | T4276 | conj | assumed,expressed |
R1262 | T4291 | T4292 | aux | to,be |
R1263 | T4292 | T4290 | xcomp | be,assumed |
R1264 | T4293 | T4292 | acomp | present,be |
R1265 | T4294 | T4293 | prep | at,present |
R1266 | T4149 | T4146 | nsubj | mice,die |
R1270 | T4150 | T4146 | prep | during,die |
R1271 | T4298 | T4297 | pobj | gestation,of |
R1272 | T4299 | T4266 | punct | .,fulfilled |
R1273 | T4151 | T4150 | pobj | embryogenesis,during |
R1274 | T4301 | T4302 | nsubj | This,demonstrates |
R1275 | T4152 | T4153 | mark | that,is |
R1276 | T4303 | T4302 | advmod | unequivocally,demonstrates |
R1277 | T4304 | T4305 | mark | that,have |
R1278 | T4305 | T4302 | ccomp | have,demonstrates |
R1279 | T4153 | T4144 | ccomp | is,indicates |
R1280 | T4306 | T4307 | compound | m,calpain |
R1281 | T4307 | T4305 | nsubj | calpain,have |
R1282 | T4308 | T4307 | punct | -,calpain |
R1283 | T4154 | T4155 | advmod | at,one |
R1284 | T4309 | T4307 | cc | and,calpain |
R1285 | T4310 | T4311 | compound | μ,calpain |
R1286 | T4311 | T4307 | conj | calpain,calpain |
R1287 | T4155 | T4153 | nsubj | one,is |
R1288 | T4312 | T4311 | punct | -,calpain |
R1289 | T4313 | T4314 | amod | distinct,roles |
R1290 | T4314 | T4305 | dobj | roles,have |
R1291 | T4156 | T4155 | advmod | least,one |
R1292 | T4315 | T4314 | amod | physiological,roles |
R1293 | T4316 | T4305 | prep | during,have |
R1294 | T4317 | T4318 | amod | early,embryogenesis |
R1295 | T4157 | T4155 | prep | of,one |
R1296 | T4318 | T4316 | pobj | embryogenesis,during |
R1297 | T4319 | T4302 | punct | .,demonstrates |
R1298 | T4158 | T4159 | det | the,calpains |
R1299 | T4159 | T4157 | pobj | calpains,of |
R1300 | T4160 | T4159 | amod | ubiquitous,calpains |
R1301 | T4161 | T4153 | acomp | essential,is |
R1302 | T4162 | T4161 | prep | for,essential |
R1303 | T4163 | T4162 | pobj | development,for |
R1304 | T4164 | T4163 | prep | to,development |
R1305 | T4165 | T4164 | pobj | term,to |
R1306 | T4166 | T4144 | punct | .,indicates |
R1059 | T4075 | T4074 | prep | to,survival |
R1070 | T4081 | T4079 | nsubj | mice,represented |
R1267 | T4295 | T4296 | det | this,stage |
R1268 | T4296 | T4294 | pobj | stage,at |
R1269 | T4297 | T4296 | prep | of,stage |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2984 | 9-13 | SO:0000704 | denotes | gene |
T2985 | 26-30 | NCBITaxon:10088 | denotes | mice |
T2986 | 157-164 | SO:0001060 | denotes | isoform |
T2987 | 210-215 | PR:000005022 | denotes | Capn4 |
T2988 | 323-328 | PR:000005022 | denotes | Capn4 |
T2989 | 332-338 | NCBITaxon:39107 | denotes | murine |
T2990 | 339-346 | UBERON:0000922 | denotes | embryos |
T2991 | 347-351 | GO:0016265 | denotes | died |
T2992 | 378-387 | GO:0007565 | denotes | gestation |
T2993 | 462-469 | UBERON:0000922 | denotes | embryos |
T2994 | 476-481 | PR:000005022 | denotes | Capn4 |
T2995 | 485-491 | NCBITaxon:39107 | denotes | murine |
T2996 | 492-501 | UBERON:0000922 | denotes | embryonic |
T2997 | 502-513 | CL:0000057 | denotes | fibroblasts |
T2998 | 550-557 | UBERON:0000922 | denotes | embryos |
T2999 | 788-803 | GO:0005925 | denotes | focal adhesions |
T3000 | 834-839 | PR:000005022 | denotes | Capn4 |
T3001 | 893-897 | SO:0000704 | denotes | gene |
T3002 | 922-931 | UBERON:0000922 | denotes | embryonic |
T3003 | 963-975 | GO:0007566 | denotes | implantation |
T3004 | 1011-1020 | UBERON:0000922 | denotes | embryonic |
T3005 | 1065-1070 | PR:000005022 | denotes | Capn4 |
T3006 | 1074-1078 | NCBITaxon:10088 | denotes | mice |
T3007 | 1215-1224 | GO:0007565 | denotes | gestation |
T3008 | 1252-1257 | PR:000005022 | denotes | Capn4 |
T3009 | 1261-1265 | NCBITaxon:10088 | denotes | mice |
T3010 | 1319-1324 | PR:000005009 | denotes | Capn1 |
T3011 | 1339-1366 | PR:000005009 | denotes | μ-calpain catalytic subunit |
T3012 | 1423-1427 | NCBITaxon:10088 | denotes | mice |
T3013 | 1473-1482 | CL:0000233 | denotes | platelets |
T3014 | 1553-1558 | PR:000005022 | denotes | Capn4 |
T3015 | 1564-1568 | NCBITaxon:10088 | denotes | mice |
T3016 | 1569-1572 | GO:0016265 | denotes | die |
T3017 | 1580-1593 | GO:0009790 | denotes | embryogenesis |
T3018 | 1704-1709 | PR:000005009 | denotes | Capn1 |
T3019 | 1720-1724 | NCBITaxon:10088 | denotes | mice |
T3020 | 1835-1848 | GO:0009790 | denotes | embryogenesis |
T3021 | 2004-2009 | PR:000005015 | denotes | Capn2 |
T3022 | 2010-2014 | SO:0000704 | denotes | gene |
T3023 | 2028-2042 | PR:000005015 | denotes | m-80 k subunit |
T3024 | 2046-2050 | NCBITaxon:10088 | denotes | mice |
T3025 | 2072-2077 | PR:000005015 | denotes | Capn2 |
T3026 | 2083-2090 | UBERON:0000922 | denotes | embryos |
T3027 | 2091-2095 | GO:0016265 | denotes | died |
T3028 | 2109-2121 | GO:0007566 | denotes | implantation |
T3029 | 2182-2195 | GO:0009790 | denotes | embryogenesis |
T3030 | 2250-2259 | GO:0010467 | denotes | expressed |
T3031 | 2263-2272 | UBERON:0000922 | denotes | embryonic |
T3032 | 2263-2277 | _FRAGMENT | denotes | embryonic stem |
T3033 | 2283-2288 | CL:0002322 | denotes | cells |
T3034 | 2279-2281 | _FRAGMENT | denotes | ES |
T3035 | 2340-2349 | GO:0007565 | denotes | gestation |
T3036 | 2459-2472 | GO:0009790 | denotes | embryogenesis |
R273 | T3033 | T3032 | _lexicallyChainedTo | cells,embryonic stem |
R276 | T3033 | T3034 | _lexicallyChainedTo | cells,ES |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3148 | 9-13 | SO_EXT:0000704 | denotes | gene |
T3149 | 14-22 | SO_EXT:sequence_deletion_entity_or_process | denotes | deletion |
T3150 | 26-30 | NCBITaxon:10088 | denotes | mice |
T3151 | 79-92 | GO_PATO_EXT:physiological_process_or_quality | denotes | physiological |
T3152 | 102-104 | _FRAGMENT | denotes | μ- |
T3153 | 111-118 | GO_PR_EXT:calpain_1_complex | denotes | calpain |
T3154 | 109-118 | GO_PR_EXT:calpain_2_complex | denotes | m-calpain |
T3155 | 157-164 | SO_EXT:0001060 | denotes | isoform |
T3156 | 210-215 | PR_EXT:000005022 | denotes | Capn4 |
T3157 | 305-307 | _FRAGMENT | denotes | μ- |
T3158 | 314-321 | GO_PR_EXT:calpain_1_complex | denotes | calpain |
T3159 | 312-321 | GO_PR_EXT:calpain_2_complex | denotes | m-calpain |
T3160 | 323-328 | PR_EXT:000005022 | denotes | Capn4 |
T3161 | 328-329 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T3162 | 330-331 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T3163 | 332-338 | NCBITaxon:39107 | denotes | murine |
T3164 | 339-346 | UBERON:0000922 | denotes | embryos |
T3165 | 347-351 | GO:0016265 | denotes | died |
T3166 | 378-387 | GO:0007565 | denotes | gestation |
T3167 | 417-419 | _FRAGMENT | denotes | μ- |
T3168 | 425-432 | GO_PR_EXT:calpain_1_complex | denotes | calpain |
T3169 | 423-432 | GO_PR_EXT:calpain_2_complex | denotes | m-calpain |
T3170 | 462-469 | UBERON:0000922 | denotes | embryos |
T3171 | 476-481 | PR_EXT:000005022 | denotes | Capn4 |
T3172 | 481-482 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T3173 | 483-484 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T3174 | 485-491 | NCBITaxon:39107 | denotes | murine |
T3175 | 492-501 | UBERON:0000922 | denotes | embryonic |
T3176 | 502-513 | CL:0000057 | denotes | fibroblasts |
T3177 | 550-557 | UBERON:0000922 | denotes | embryos |
T3178 | 673-681 | GO_PR_EXT:spectrin | denotes | spectrin |
T3179 | 721-730 | GO_EXT:biological_movement_or_translocation_process | denotes | migration |
T3180 | 777-784 | GO_EXT:biological_release | denotes | release |
T3181 | 788-803 | GO:0005925 | denotes | focal adhesions |
T3182 | 794-803 | GO_PATO_EXT:biological_adhesion_entity_or_process | denotes | adhesions |
T3183 | 834-839 | PR_EXT:000005022 | denotes | Capn4 |
T3184 | 877-885 | SO_EXT:sequence_deletion_entity_or_process | denotes | deletion |
T3185 | 893-897 | SO_EXT:0000704 | denotes | gene |
T3186 | 922-931 | UBERON:0000922 | denotes | embryonic |
T3187 | 932-941 | GO_EXT:fatality_or_lethality | denotes | lethality |
T3188 | 963-975 | GO:0007566 | denotes | implantation |
T3189 | 1011-1020 | UBERON:0000922 | denotes | embryonic |
T3190 | 1021-1030 | GO_EXT:fatality_or_lethality | denotes | lethality |
T3191 | 1065-1070 | PR_EXT:000005022 | denotes | Capn4 |
T3192 | 1070-1071 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T3193 | 1072-1073 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T3194 | 1074-1078 | NCBITaxon:10088 | denotes | mice |
T3195 | 1117-1125 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutation |
T3196 | 1215-1224 | GO:0007565 | denotes | gestation |
T3197 | 1252-1257 | PR_EXT:000005022 | denotes | Capn4 |
T3198 | 1257-1258 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T3199 | 1259-1260 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T3200 | 1261-1265 | NCBITaxon:10088 | denotes | mice |
T3201 | 1290-1294 | SO_EXT:sequence_nullness | denotes | null |
T3202 | 1295-1303 | SO_EXT:sequence_alteration_entity_or_process | denotes | mutation |
T3203 | 1319-1324 | PR_EXT:000005009 | denotes | Capn1 |
T3204 | 1326-1334 | SO_EXT:sequence_coding_function | denotes | encoding |
T3205 | 1339-1348 | GO_PR_EXT:calpain_1_complex | denotes | μ-calpain |
T3206 | 1339-1366 | PR_EXT:000005009 | denotes | μ-calpain catalytic subunit |
T3207 | 1349-1358 | GO_MOP_EXT:catalysis | denotes | catalytic |
T3208 | 1423-1427 | NCBITaxon:10088 | denotes | mice |
T3209 | 1458-1467 | GO_PR_EXT:calpain_1_complex | denotes | μ-calpain |
T3210 | 1473-1482 | CL:0000233 | denotes | platelets |
T3211 | 1553-1558 | PR_EXT:000005022 | denotes | Capn4 |
T3212 | 1559-1563 | SO_EXT:sequence_nullness | denotes | null |
T3213 | 1564-1568 | NCBITaxon:10088 | denotes | mice |
T3214 | 1569-1572 | GO:0016265 | denotes | die |
T3215 | 1580-1593 | GO:0009790 | denotes | embryogenesis |
T3216 | 1704-1709 | PR_EXT:000005009 | denotes | Capn1 |
T3217 | 1720-1724 | NCBITaxon:10088 | denotes | mice |
T3218 | 1793-1802 | GO_PR_EXT:calpain_2_complex | denotes | m-calpain |
T3219 | 1835-1848 | GO:0009790 | denotes | embryogenesis |
T3220 | 2004-2009 | PR_EXT:000005015 | denotes | Capn2 |
T3221 | 2010-2014 | SO_EXT:0000704 | denotes | gene |
T3222 | 2015-2023 | SO_EXT:sequence_coding_function | denotes | encoding |
T3223 | 2028-2042 | PR_EXT:000005015 | denotes | m-80 k subunit |
T3224 | 2046-2050 | NCBITaxon:10088 | denotes | mice |
T3225 | 2072-2077 | PR_EXT:000005015 | denotes | Capn2 |
T3226 | 2078-2082 | SO_EXT:sequence_nullness | denotes | null |
T3227 | 2083-2090 | UBERON:0000922 | denotes | embryos |
T3228 | 2091-2095 | GO:0016265 | denotes | died |
T3229 | 2109-2121 | GO:0007566 | denotes | implantation |
T3230 | 2145-2154 | GO_PR_EXT:calpain_2_complex | denotes | m-calpain |
T3231 | 2182-2195 | GO:0009790 | denotes | embryogenesis |
T3232 | 2230-2239 | GO_PR_EXT:calpain_1_complex | denotes | μ-calpain |
T3233 | 2250-2259 | GO:0010467 | denotes | expressed |
T3234 | 2263-2272 | UBERON:0000922 | denotes | embryonic |
T3235 | 2263-2277 | _FRAGMENT | denotes | embryonic stem |
T3236 | 2283-2288 | CL:0002322 | denotes | cells |
T3237 | 2279-2281 | _FRAGMENT | denotes | ES |
T3238 | 2283-2288 | CL_GO_EXT:cell | denotes | cells |
T3239 | 2340-2349 | GO:0007565 | denotes | gestation |
T3240 | 2388-2397 | GO_PR_EXT:calpain_2_complex | denotes | m-calpain |
T3241 | 2402-2411 | GO_PR_EXT:calpain_1_complex | denotes | μ-calpain |
T3242 | 2426-2439 | GO_PATO_EXT:physiological_process_or_quality | denotes | physiological |
T3243 | 2459-2472 | GO:0009790 | denotes | embryogenesis |
R277 | T3153 | T3152 | _lexicallyChainedTo | calpain,μ- |
R280 | T3158 | T3157 | _lexicallyChainedTo | calpain,μ- |
R281 | T3168 | T3167 | _lexicallyChainedTo | calpain,μ- |
R285 | T3236 | T3235 | _lexicallyChainedTo | cells,embryonic stem |
R286 | T3236 | T3237 | _lexicallyChainedTo | cells,ES |