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PMC:1382200 / 31235-31465 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T16888 229-230 . denotes .
T16887 221-229 NN denotes blotting
T16886 212-220 NNP denotes Southern
T16885 209-211 IN denotes by
T16884 194-200 NN denotes mutant
T16883 190-193 CC denotes and
T16882 184-185 HYPH denotes -
T16881 185-189 NN denotes type
T16880 180-184 JJ denotes wild
T16879 201-208 NNS denotes alleles
T16878 176-179 DT denotes the
T16877 161-175 VBG denotes distinguishing
T16876 157-160 IN denotes for
T16875 151-156 NN denotes basis
T16874 149-150 DT denotes a
T16873 138-140 , denotes ,
T16872 125-126 HYPH denotes -
T16871 126-129 NN denotes Neo
T16870 122-125 NN denotes PGK
T16869 130-138 NN denotes cassette
T16868 118-121 DT denotes the
T16867 115-117 IN denotes of
T16866 109-110 SYM denotes '
T16865 108-109 CD denotes 3
T16864 111-114 NN denotes end
T16863 104-107 DT denotes the
T16862 101-103 IN denotes at
T16861 90-95 NN denotes BamHI
T16860 86-89 JJ denotes new
T16859 96-100 NN denotes site
T16858 84-85 DT denotes a
T16857 81-83 IN denotes of
T16856 68-80 NN denotes introduction
T16855 64-67 DT denotes the
T16854 59-63 IN denotes with
T16853 51-58 VBN denotes coupled
T16852 49-51 , denotes ,
T16851 36-42 NN denotes mutant
T16850 43-49 NN denotes allele
T16849 32-35 DT denotes the
T16848 29-31 IN denotes in
T16847 18-23 NN denotes BamHI
T16846 24-28 NN denotes site
T16845 13-17 DT denotes this
T16844 10-12 IN denotes of
T16843 140-148 VBN denotes provided
T16842 5-9 NN denotes loss
T16841 1-4 DT denotes The
T16840 0-230 sentence denotes The loss of this BamHI site in the mutant allele, coupled with the introduction of a new BamHI site at the 3' end of the PGK-Neo cassette, provided a basis for distinguishing the wild-type and mutant alleles by Southern blotting.
R5034 T16841 T16842 det The,loss
R5035 T16842 T16843 nsubj loss,provided
R5036 T16844 T16842 prep of,loss
R5037 T16845 T16846 det this,site
R5038 T16846 T16844 pobj site,of
R5039 T16847 T16846 compound BamHI,site
R5040 T16848 T16842 prep in,loss
R5041 T16849 T16850 det the,allele
R5042 T16850 T16848 pobj allele,in
R5043 T16851 T16850 compound mutant,allele
R5044 T16852 T16842 punct ", ",loss
R5045 T16853 T16842 acl coupled,loss
R5046 T16854 T16853 prep with,coupled
R5047 T16855 T16856 det the,introduction
R5048 T16856 T16854 pobj introduction,with
R5049 T16857 T16856 prep of,introduction
R5050 T16858 T16859 det a,site
R5051 T16859 T16857 pobj site,of
R5052 T16860 T16859 amod new,site
R5053 T16861 T16859 compound BamHI,site
R5054 T16862 T16853 prep at,coupled
R5055 T16863 T16864 det the,end
R5056 T16864 T16862 pobj end,at
R5057 T16865 T16864 nummod 3,end
R5058 T16866 T16865 punct ',3
R5059 T16867 T16864 prep of,end
R5060 T16868 T16869 det the,cassette
R5061 T16869 T16867 pobj cassette,of
R5062 T16870 T16871 compound PGK,Neo
R5063 T16871 T16869 compound Neo,cassette
R5064 T16872 T16871 punct -,Neo
R5065 T16873 T16843 punct ", ",provided
R5066 T16874 T16875 det a,basis
R5067 T16875 T16843 dobj basis,provided
R5068 T16876 T16875 prep for,basis
R5069 T16877 T16876 pcomp distinguishing,for
R5070 T16878 T16879 det the,alleles
R5071 T16879 T16877 dobj alleles,distinguishing
R5072 T16880 T16881 amod wild,type
R5073 T16881 T16879 nmod type,alleles
R5074 T16882 T16881 punct -,type
R5075 T16883 T16881 cc and,type
R5076 T16884 T16881 conj mutant,type
R5077 T16885 T16877 prep by,distinguishing
R5078 T16886 T16887 compound Southern,blotting
R5079 T16887 T16885 pobj blotting,by
R5080 T16888 T16843 punct .,provided

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T16650 201-208 SO:0001023 denotes alleles
T16649 130-138 SO:0005853 denotes cassette
T16648 90-95 PR:P23940 denotes BamHI
T16647 43-49 SO:0001023 denotes allele
T16646 18-23 PR:P23940 denotes BamHI

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T16696 201-208 SO_EXT:0001023 denotes alleles
T16695 194-200 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T16694 180-189 SO_EXT:wild_type_entity_or_quality denotes wild-type
T16693 130-138 SO_EXT:0005853 denotes cassette
T16692 126-129 CHEBI_GO_EXT:neomycin_or_neomycin_phosphotransferase denotes Neo
T16691 122-125 GO_EXT:phosphoglycerate_kinase denotes PGK
T16690 90-95 PR_EXT:P23940 denotes BamHI
T16689 43-49 SO_EXT:0001023 denotes allele
T16688 36-42 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T16687 18-23 PR_EXT:P23940 denotes BamHI