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PMC:1382200 / 3099-3514 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T3544 0-415 sentence denotes Research on calpains has linked them with a wide variety of functions including muscle growth, development, degeneration (3), neuronal growth and neurodegeneration [4], cell cycle progression [5,6], signal cascades triggered by integrins and growth factors [7], membrane protrusion [8], remodeling of the cytoskeleton and cell migration [9-15], and regulation of cell death via both necrosis and apoptosis [16-22].
T3545 1-9 NN denotes Research
T3546 26-32 VBN denotes linked
T3547 10-12 IN denotes on
T3548 13-21 NNS denotes calpains
T3549 22-25 VBZ denotes has
T3550 33-37 PRP denotes them
T3551 38-42 IN denotes with
T3552 43-44 DT denotes a
T3553 50-57 NN denotes variety
T3554 45-49 JJ denotes wide
T3555 58-60 IN denotes of
T3556 61-70 NNS denotes functions
T3557 71-80 VBG denotes including
T3558 81-87 NN denotes muscle
T3559 88-94 NN denotes growth
T3560 94-96 , denotes ,
T3561 96-107 NN denotes development
T3562 107-109 , denotes ,
T3563 109-121 NN denotes degeneration
T3564 122-123 -LRB- denotes (
T3565 123-124 CD denotes 3
T3566 124-125 -RRB- denotes )
T3567 125-127 , denotes ,
T3568 127-135 JJ denotes neuronal
T3569 136-142 NN denotes growth
T3570 143-146 CC denotes and
T3571 147-164 NN denotes neurodegeneration
T3572 165-166 -LRB- denotes [
T3573 166-167 CD denotes 4
T3574 167-168 -RRB- denotes ]
T3575 168-170 , denotes ,
T3576 170-174 NN denotes cell
T3577 175-180 NN denotes cycle
T3578 181-192 NN denotes progression
T3579 193-194 -LRB- denotes [
T3580 196-197 CD denotes 6
T3581 194-195 CD denotes 5
T3582 195-196 , denotes ,
T3583 197-198 -RRB- denotes ]
T3584 198-200 , denotes ,
T3585 200-206 NN denotes signal
T3586 207-215 NNS denotes cascades
T3587 216-225 VBN denotes triggered
T3588 226-228 IN denotes by
T3589 229-238 NNS denotes integrins
T3590 239-242 CC denotes and
T3591 243-249 NN denotes growth
T3592 250-257 NNS denotes factors
T3593 258-259 -LRB- denotes [
T3594 259-260 CD denotes 7
T3595 260-261 -RRB- denotes ]
T3596 261-263 , denotes ,
T3597 263-271 NN denotes membrane
T3598 272-282 NN denotes protrusion
T3599 283-284 -LRB- denotes [
T3600 284-285 CD denotes 8
T3601 285-286 -RRB- denotes ]
T3602 286-288 , denotes ,
T3603 288-298 VBG denotes remodeling
T3604 299-301 IN denotes of
T3605 302-305 DT denotes the
T3606 306-318 NN denotes cytoskeleton
T3607 319-322 CC denotes and
T3608 323-327 NN denotes cell
T3609 328-337 NN denotes migration
T3610 338-339 -LRB- denotes [
T3611 339-340 CD denotes 9
T3612 340-341 SYM denotes -
T3613 341-343 CD denotes 15
T3614 343-344 -RRB- denotes ]
T3615 344-346 , denotes ,
T3616 346-349 CC denotes and
T3617 350-360 NN denotes regulation
T3618 361-363 IN denotes of
T3619 364-368 NN denotes cell
T3620 369-374 NN denotes death
T3621 375-378 IN denotes via
T3622 379-383 CC denotes both
T3623 384-392 NN denotes necrosis
T3624 393-396 CC denotes and
T3625 397-406 NN denotes apoptosis
T3626 407-408 -LRB- denotes [
T3627 408-410 CD denotes 16
T3628 410-411 SYM denotes -
T3629 411-413 CD denotes 22
T3630 413-414 -RRB- denotes ]
T3631 414-415 . denotes .
R543 T3545 T3546 nsubj Research,linked
R544 T3547 T3545 prep on,Research
R546 T3548 T3547 pobj calpains,on
R547 T3549 T3546 aux has,linked
R548 T3550 T3546 dobj them,linked
R550 T3551 T3546 prep with,linked
R551 T3552 T3553 det a,variety
R553 T3553 T3551 pobj variety,with
R554 T3554 T3553 amod wide,variety
R555 T3555 T3553 prep of,variety
R557 T3556 T3555 pobj functions,of
R558 T3557 T3553 prep including,variety
R559 T3558 T3559 compound muscle,growth
R561 T3559 T3557 pobj growth,including
R563 T3560 T3559 punct ", ",growth
R565 T3561 T3559 conj development,growth
R566 T3562 T3561 punct ", ",development
R567 T3563 T3561 conj degeneration,development
R569 T3564 T3565 punct (,3
R571 T3565 T3563 parataxis 3,degeneration
R573 T3566 T3565 punct ),3
R574 T3567 T3563 punct ", ",degeneration
R579 T3570 T3569 cc and,growth
R580 T3571 T3569 conj neurodegeneration,growth
R581 T3572 T3573 punct [,4
R582 T3573 T3571 parataxis 4,neurodegeneration
R583 T3574 T3573 punct ],4
R584 T3575 T3569 punct ", ",growth
R585 T3576 T3577 compound cell,cycle
R587 T3577 T3578 compound cycle,progression
R588 T3578 T3569 conj progression,growth
R590 T3579 T3580 punct [,6
R591 T3580 T3578 parataxis 6,progression
R592 T3581 T3580 nummod 5,6
R594 T3582 T3580 punct ",",6
R595 T3583 T3580 punct ],6
R596 T3584 T3578 punct ", ",progression
R598 T3585 T3586 compound signal,cascades
R599 T3586 T3578 conj cascades,progression
R600 T3587 T3586 acl triggered,cascades
R602 T3588 T3587 agent by,triggered
R603 T3589 T3588 pobj integrins,by
R604 T3590 T3589 cc and,integrins
R605 T3591 T3592 compound growth,factors
R607 T3592 T3589 conj factors,integrins
R608 T3593 T3594 punct [,7
R609 T3594 T3587 parataxis 7,triggered
R611 T3595 T3594 punct ],7
R612 T3596 T3586 punct ", ",cascades
R613 T3597 T3598 compound membrane,protrusion
R614 T3598 T3586 conj protrusion,cascades
R616 T3599 T3600 punct [,8
R617 T3600 T3598 parataxis 8,protrusion
R619 T3601 T3600 punct ],8
R620 T3602 T3598 punct ", ",protrusion
R621 T3603 T3598 conj remodeling,protrusion
R623 T3604 T3603 prep of,remodeling
R624 T3605 T3606 det the,cytoskeleton
R625 T3606 T3604 pobj cytoskeleton,of
R627 T3607 T3603 cc and,remodeling
R628 T3608 T3609 compound cell,migration
R629 T3609 T3603 conj migration,remodeling
R631 T3610 T3611 punct [,9
R632 T3611 T3609 parataxis 9,migration
R633 T3612 T3613 punct -,15
R634 T3613 T3611 appos 15,9
R635 T3614 T3611 punct ],9
R636 T3615 T3603 punct ", ",remodeling
R638 T3616 T3603 cc and,remodeling
R639 T3617 T3603 conj regulation,remodeling
R641 T3618 T3617 prep of,regulation
R642 T3619 T3620 compound cell,death
R643 T3620 T3618 pobj death,of
R644 T3621 T3617 prep via,regulation
R646 T3622 T3623 preconj both,necrosis
R647 T3623 T3621 pobj necrosis,via
R648 T3624 T3623 cc and,necrosis
R650 T3625 T3623 conj apoptosis,necrosis
R651 T3626 T3627 punct [,16
R652 T3627 T3617 parataxis 16,regulation
R654 T3628 T3629 punct -,22
R655 T3629 T3627 appos 22,16
R656 T3630 T3627 punct ],16
R657 T3631 T3546 punct .,linked
R576 T3568 T3569 amod neuronal,growth
R577 T3569 T3563 conj growth,degeneration

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T2958 127-135 CL:0000540 denotes neuronal
T2959 170-180 GO:0007049 denotes cell cycle
T2960 263-271 GO:0016020 denotes membrane
T2961 306-318 GO:0005856 denotes cytoskeleton
T2962 323-337 GO:0016477 denotes cell migration
T2963 350-374 GO:0010941 denotes regulation of cell death
T2964 397-406 GO:0006915 denotes apoptosis

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T3089 81-87 UBERON_EXT:muscle_structure_or_tissue denotes muscle
T3090 81-87 _FRAGMENT denotes muscle
T3091 96-107 GO_EXT:muscle_structure_or_tissue_development denotes development
T3092 88-94 GO_EXT:biological_growth_entity_or_process denotes growth
T3093 127-135 CL:0000540 denotes neuronal
T3094 136-142 GO_EXT:biological_growth_entity_or_process denotes growth
T3095 170-174 CL_GO_EXT:cell denotes cell
T3096 170-180 GO:0007049 denotes cell cycle
T3097 200-215 GO_EXT:cell_communication_or_signaling_or_signal_transduction denotes signal cascades
T3098 229-238 GO_PR_EXT:integrin denotes integrins
T3099 243-249 GO_EXT:biological_growth_entity_or_process denotes growth
T3100 243-257 GO_EXT:0008083 denotes growth factors
T3101 263-271 GO:0016020 denotes membrane
T3102 306-318 GO:0005856 denotes cytoskeleton
T3103 323-327 CL_GO_EXT:cell denotes cell
T3104 323-337 GO:0016477 denotes cell migration
T3105 350-374 GO:0010941 denotes regulation of cell death
T3106 364-368 CL_GO_EXT:cell denotes cell
T3107 384-392 GO_PATO_EXT:necrosis denotes necrosis
T3108 397-406 GO:0006915 denotes apoptosis
R279 T3091 T3090 _lexicallyChainedTo development,muscle