PMC:1382200 / 30687-31653
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16892 | 783-787 | JJ | denotes | long |
T16891 | 801-804 | NN | denotes | arm |
T16890 | 779-782 | DT | denotes | The |
T16889 | 778-966 | sentence | denotes | The long (downstream) arm of homology was provided by a 7-kb HindIII-KpnI fragment, extending from intron 7 to intron 12, inserted between the PGK-Neo and thymidine kinase (tk) cassettes. |
T16888 | 777-778 | . | denotes | . |
T16887 | 769-777 | NN | denotes | blotting |
T16886 | 760-768 | NNP | denotes | Southern |
T16885 | 757-759 | IN | denotes | by |
T16884 | 742-748 | NN | denotes | mutant |
T16883 | 738-741 | CC | denotes | and |
T16882 | 732-733 | HYPH | denotes | - |
T16881 | 733-737 | NN | denotes | type |
T16880 | 728-732 | JJ | denotes | wild |
T16879 | 749-756 | NNS | denotes | alleles |
T16878 | 724-727 | DT | denotes | the |
T16877 | 709-723 | VBG | denotes | distinguishing |
T16876 | 705-708 | IN | denotes | for |
T16875 | 699-704 | NN | denotes | basis |
T16874 | 697-698 | DT | denotes | a |
T16873 | 686-688 | , | denotes | , |
T16872 | 673-674 | HYPH | denotes | - |
T16871 | 674-677 | NN | denotes | Neo |
T16870 | 670-673 | NN | denotes | PGK |
T16869 | 678-686 | NN | denotes | cassette |
T16868 | 666-669 | DT | denotes | the |
T16867 | 663-665 | IN | denotes | of |
T16866 | 657-658 | SYM | denotes | ' |
T16865 | 656-657 | CD | denotes | 3 |
T16864 | 659-662 | NN | denotes | end |
T16863 | 652-655 | DT | denotes | the |
T16862 | 649-651 | IN | denotes | at |
T16861 | 638-643 | NN | denotes | BamHI |
T16860 | 634-637 | JJ | denotes | new |
T16859 | 644-648 | NN | denotes | site |
T16858 | 632-633 | DT | denotes | a |
T16857 | 629-631 | IN | denotes | of |
T16856 | 616-628 | NN | denotes | introduction |
T16855 | 612-615 | DT | denotes | the |
T16854 | 607-611 | IN | denotes | with |
T16853 | 599-606 | VBN | denotes | coupled |
T16852 | 597-599 | , | denotes | , |
T16851 | 584-590 | NN | denotes | mutant |
T16850 | 591-597 | NN | denotes | allele |
T16849 | 580-583 | DT | denotes | the |
T16848 | 577-579 | IN | denotes | in |
T16847 | 566-571 | NN | denotes | BamHI |
T16846 | 572-576 | NN | denotes | site |
T16845 | 561-565 | DT | denotes | this |
T16844 | 558-560 | IN | denotes | of |
T16843 | 688-696 | VBN | denotes | provided |
T16842 | 553-557 | NN | denotes | loss |
T16841 | 549-552 | DT | denotes | The |
T16840 | 548-778 | sentence | denotes | The loss of this BamHI site in the mutant allele, coupled with the introduction of a new BamHI site at the 3' end of the PGK-Neo cassette, provided a basis for distinguishing the wild-type and mutant alleles by Southern blotting. |
T16839 | 547-548 | . | denotes | . |
T16838 | 534-537 | VBD | denotes | was |
T16837 | 524-529 | JJ | denotes | short |
T16836 | 530-533 | NN | denotes | arm |
T16835 | 520-523 | DT | denotes | the |
T16834 | 517-519 | IN | denotes | of |
T16833 | 511-512 | SYM | denotes | ' |
T16832 | 510-511 | CD | denotes | 3 |
T16831 | 513-516 | NN | denotes | end |
T16830 | 506-509 | DT | denotes | the |
T16829 | 503-505 | IN | denotes | at |
T16828 | 492-497 | NN | denotes | BamHI |
T16827 | 498-502 | NN | denotes | site |
T16826 | 488-491 | DT | denotes | the |
T16825 | 486-488 | , | denotes | , |
T16824 | 479-486 | NN | denotes | cloning |
T16823 | 538-547 | VBN | denotes | abolished |
T16822 | 472-478 | IN | denotes | During |
T16821 | 471-548 | sentence | denotes | During cloning, the BamHI site at the 3' end of the short arm was abolished. |
T16820 | 470-471 | . | denotes | . |
T16819 | 469-470 | -RRB- | denotes | ] |
T16818 | 467-469 | CD | denotes | 48 |
T16817 | 466-467 | -LRB- | denotes | [ |
T16816 | 452-453 | HYPH | denotes | - |
T16815 | 453-456 | NN | denotes | Neo |
T16814 | 449-452 | NN | denotes | PGK |
T16813 | 457-465 | NN | denotes | cassette |
T16812 | 445-448 | DT | denotes | the |
T16811 | 442-444 | IN | denotes | of |
T16810 | 433-441 | RB | denotes | upstream |
T16809 | 421-425 | NN | denotes | pPNT |
T16808 | 426-432 | NN | denotes | vector |
T16807 | 417-420 | DT | denotes | the |
T16806 | 412-416 | IN | denotes | into |
T16805 | 399-402 | VBD | denotes | was |
T16804 | 403-411 | VBN | denotes | inserted |
T16803 | 393-398 | WDT | denotes | which |
T16802 | 391-393 | , | denotes | , |
T16801 | 390-391 | CD | denotes | 6 |
T16800 | 386-389 | CC | denotes | and |
T16799 | 384-385 | CD | denotes | 5 |
T16798 | 378-383 | NNS | denotes | exons |
T16797 | 367-377 | VBG | denotes | containing |
T16796 | 365-367 | , | denotes | , |
T16795 | 350-351 | HYPH | denotes | - |
T16794 | 351-356 | NN | denotes | BamHI |
T16793 | 343-350 | NN | denotes | HindIII |
T16792 | 339-340 | HYPH | denotes | - |
T16791 | 340-342 | NN | denotes | kb |
T16790 | 336-339 | CD | denotes | 2.7 |
T16789 | 357-365 | NN | denotes | fragment |
T16788 | 334-335 | DT | denotes | a |
T16787 | 331-333 | IN | denotes | by |
T16786 | 318-321 | VBD | denotes | was |
T16785 | 298-307 | NN | denotes | targeting |
T16784 | 308-317 | NN | denotes | construct |
T16783 | 294-297 | DT | denotes | the |
T16782 | 291-293 | IN | denotes | of |
T16781 | 322-330 | VBN | denotes | provided |
T16780 | 285-286 | -RRB- | denotes | ) |
T16779 | 277-285 | JJ | denotes | upstream |
T16778 | 276-277 | -LRB- | denotes | ( |
T16777 | 270-275 | JJ | denotes | short |
T16776 | 287-290 | NN | denotes | arm |
T16775 | 266-269 | DT | denotes | The |
T16774 | 265-471 | sentence | denotes | The short (upstream) arm of the targeting construct was provided by a 2.7-kb HindIII-BamHI fragment, containing exons 5 and 6, which was inserted into the pPNT vector upstream of the PGK-Neo cassette [48]. |
T16773 | 264-265 | . | denotes | . |
T16772 | 250-255 | NN | denotes | triad |
T16771 | 240-249 | JJ | denotes | catalytic |
T16770 | 256-264 | NNS | denotes | residues |
T16769 | 236-239 | DT | denotes | the |
T16768 | 233-235 | IN | denotes | of |
T16767 | 229-232 | CD | denotes | one |
T16766 | 227-229 | , | denotes | , |
T16765 | 221-227 | NN | denotes | Asn286 |
T16764 | 211-220 | VBG | denotes | including |
T16763 | 209-211 | , | denotes | , |
T16762 | 197-198 | HYPH | denotes | - |
T16761 | 198-202 | NN | denotes | site |
T16760 | 191-197 | JJ | denotes | active |
T16759 | 203-209 | NN | denotes | region |
T16758 | 187-190 | DT | denotes | the |
T16757 | 184-186 | IN | denotes | in |
T16756 | 172-177 | NN | denotes | amino |
T16755 | 178-183 | NNS | denotes | acids |
T16754 | 169-171 | CD | denotes | 24 |
T16753 | 159-160 | CD | denotes | 7 |
T16752 | 161-168 | VBZ | denotes | encodes |
T16751 | 154-158 | NN | denotes | Exon |
T16750 | 153-265 | sentence | denotes | Exon 7 encodes 24 amino acids in the active-site region, including Asn286, one of the catalytic triad residues. |
T16749 | 152-153 | . | denotes | . |
T16748 | 151-152 | -RRB- | denotes | ) |
T16747 | 150-151 | CD | denotes | 1 |
T16746 | 143-149 | NN | denotes | Figure |
T16745 | 142-143 | -LRB- | denotes | ( |
T16744 | 128-129 | HYPH | denotes | - |
T16743 | 129-132 | NN | denotes | Neo |
T16742 | 125-128 | NN | denotes | PGK |
T16741 | 133-141 | NN | denotes | cassette |
T16740 | 121-124 | DT | denotes | the |
T16739 | 116-120 | IN | denotes | with |
T16738 | 114-116 | , | denotes | , |
T16737 | 104-109 | NN | denotes | Capn2 |
T16736 | 110-114 | NN | denotes | gene |
T16735 | 100-103 | DT | denotes | the |
T16734 | 97-99 | IN | denotes | of |
T16733 | 95-96 | CD | denotes | 7 |
T16732 | 90-94 | NN | denotes | exon |
T16731 | 79-89 | VBG | denotes | containing |
T16730 | 77-79 | , | denotes | , |
T16729 | 60-61 | HYPH | denotes | - |
T16728 | 61-68 | NN | denotes | HindIII |
T16727 | 55-60 | NN | denotes | BamHI |
T16726 | 52-54 | NN | denotes | bp |
T16725 | 48-51 | CD | denotes | 785 |
T16724 | 69-77 | NN | denotes | fragment |
T16723 | 46-47 | DT | denotes | a |
T16722 | 38-45 | VB | denotes | replace |
T16721 | 35-37 | TO | denotes | to |
T16720 | 22-25 | VBD | denotes | was |
T16719 | 26-34 | VBN | denotes | designed |
T16718 | 2-11 | NN | denotes | targeting |
T16717 | 12-21 | NN | denotes | construct |
T16716 | 0-1 | DT | denotes | A |
T16903 | 835-836 | CD | denotes | 7 |
T16902 | 853-861 | NN | denotes | fragment |
T16901 | 833-834 | DT | denotes | a |
T16900 | 830-832 | IN | denotes | by |
T16899 | 817-820 | VBD | denotes | was |
T16898 | 808-816 | NN | denotes | homology |
T16897 | 805-807 | IN | denotes | of |
T16896 | 821-829 | VBN | denotes | provided |
T16895 | 799-800 | -RRB- | denotes | ) |
T16894 | 789-799 | JJ | denotes | downstream |
T16893 | 788-789 | -LRB- | denotes | ( |
T16931 | 965-966 | . | denotes | . |
T16930 | 954-955 | -RRB- | denotes | ) |
T16929 | 952-954 | NN | denotes | tk |
T16928 | 951-952 | -LRB- | denotes | ( |
T16927 | 944-950 | NN | denotes | kinase |
T16926 | 934-943 | NN | denotes | thymidine |
T16925 | 930-933 | CC | denotes | and |
T16924 | 925-926 | HYPH | denotes | - |
T16923 | 926-929 | NN | denotes | Neo |
T16922 | 922-925 | NN | denotes | PGK |
T16921 | 956-965 | NNS | denotes | cassettes |
T16920 | 918-921 | DT | denotes | the |
T16919 | 910-917 | IN | denotes | between |
T16918 | 901-909 | VBN | denotes | inserted |
T16917 | 899-901 | , | denotes | , |
T16916 | 897-899 | CD | denotes | 12 |
T16915 | 890-896 | NN | denotes | intron |
T16914 | 887-889 | IN | denotes | to |
T16913 | 885-886 | CD | denotes | 7 |
T16912 | 878-884 | NN | denotes | intron |
T16911 | 873-877 | IN | denotes | from |
T16910 | 863-872 | VBG | denotes | extending |
T16909 | 861-863 | , | denotes | , |
T16908 | 847-848 | HYPH | denotes | - |
T16907 | 848-852 | NN | denotes | KpnI |
T16906 | 840-847 | NN | denotes | HindIII |
T16905 | 836-837 | HYPH | denotes | - |
T16904 | 837-839 | NN | denotes | kb |
R4917 | T16716 | T16717 | det | A,construct |
R4918 | T16717 | T16719 | nsubjpass | construct,designed |
R4919 | T16718 | T16717 | compound | targeting,construct |
R4920 | T16720 | T16719 | auxpass | was,designed |
R4921 | T16721 | T16722 | aux | to,replace |
R4922 | T16722 | T16719 | advcl | replace,designed |
R4923 | T16723 | T16724 | det | a,fragment |
R4924 | T16724 | T16722 | dobj | fragment,replace |
R4925 | T16725 | T16726 | nummod | 785,bp |
R4926 | T16726 | T16724 | compound | bp,fragment |
R4927 | T16727 | T16728 | compound | BamHI,HindIII |
R4928 | T16728 | T16724 | compound | HindIII,fragment |
R4929 | T16729 | T16728 | punct | -,HindIII |
R4930 | T16730 | T16724 | punct | ", ",fragment |
R4931 | T16731 | T16724 | acl | containing,fragment |
R4932 | T16732 | T16731 | dobj | exon,containing |
R4933 | T16733 | T16732 | nummod | 7,exon |
R4934 | T16734 | T16732 | prep | of,exon |
R4935 | T16735 | T16736 | det | the,gene |
R4936 | T16736 | T16734 | pobj | gene,of |
R4937 | T16737 | T16736 | compound | Capn2,gene |
R4938 | T16738 | T16722 | punct | ", ",replace |
R4939 | T16739 | T16722 | prep | with,replace |
R4940 | T16740 | T16741 | det | the,cassette |
R4941 | T16741 | T16739 | pobj | cassette,with |
R4942 | T16742 | T16743 | compound | PGK,Neo |
R4943 | T16743 | T16741 | compound | Neo,cassette |
R4944 | T16744 | T16743 | punct | -,Neo |
R4945 | T16745 | T16746 | punct | (,Figure |
R4946 | T16746 | T16722 | parataxis | Figure,replace |
R4947 | T16747 | T16746 | nummod | 1,Figure |
R4948 | T16748 | T16746 | punct | ),Figure |
R4949 | T16749 | T16719 | punct | .,designed |
R4950 | T16751 | T16752 | nsubj | Exon,encodes |
R4951 | T16753 | T16751 | nummod | 7,Exon |
R4952 | T16754 | T16755 | nummod | 24,acids |
R4953 | T16755 | T16752 | dobj | acids,encodes |
R4954 | T16756 | T16755 | compound | amino,acids |
R4955 | T16757 | T16752 | prep | in,encodes |
R4956 | T16758 | T16759 | det | the,region |
R4957 | T16759 | T16757 | pobj | region,in |
R4958 | T16760 | T16761 | amod | active,site |
R4959 | T16761 | T16759 | compound | site,region |
R4960 | T16762 | T16761 | punct | -,site |
R4961 | T16763 | T16752 | punct | ", ",encodes |
R4962 | T16764 | T16752 | prep | including,encodes |
R4963 | T16765 | T16764 | pobj | Asn286,including |
R4964 | T16766 | T16765 | punct | ", ",Asn286 |
R4965 | T16767 | T16765 | appos | one,Asn286 |
R4966 | T16768 | T16767 | prep | of,one |
R4967 | T16769 | T16770 | det | the,residues |
R4968 | T16770 | T16768 | pobj | residues,of |
R4969 | T16771 | T16770 | amod | catalytic,residues |
R4970 | T16772 | T16770 | compound | triad,residues |
R4971 | T16773 | T16752 | punct | .,encodes |
R4972 | T16775 | T16776 | det | The,arm |
R4973 | T16776 | T16781 | nsubjpass | arm,provided |
R4974 | T16777 | T16776 | amod | short,arm |
R4975 | T16778 | T16776 | punct | (,arm |
R4976 | T16779 | T16776 | amod | upstream,arm |
R4977 | T16780 | T16776 | punct | ),arm |
R4978 | T16782 | T16776 | prep | of,arm |
R4979 | T16783 | T16784 | det | the,construct |
R4980 | T16784 | T16782 | pobj | construct,of |
R4981 | T16785 | T16784 | compound | targeting,construct |
R4982 | T16786 | T16781 | auxpass | was,provided |
R4983 | T16787 | T16781 | agent | by,provided |
R4984 | T16788 | T16789 | det | a,fragment |
R4985 | T16789 | T16787 | pobj | fragment,by |
R4986 | T16790 | T16791 | nummod | 2.7,kb |
R4987 | T16791 | T16789 | compound | kb,fragment |
R4988 | T16792 | T16791 | punct | -,kb |
R4989 | T16793 | T16794 | compound | HindIII,BamHI |
R4990 | T16794 | T16789 | compound | BamHI,fragment |
R4991 | T16795 | T16794 | punct | -,BamHI |
R4992 | T16796 | T16789 | punct | ", ",fragment |
R4993 | T16797 | T16789 | acl | containing,fragment |
R4994 | T16798 | T16799 | nmod | exons,5 |
R4995 | T16799 | T16797 | dobj | 5,containing |
R4996 | T16800 | T16799 | cc | and,5 |
R4997 | T16801 | T16799 | conj | 6,5 |
R4998 | T16802 | T16789 | punct | ", ",fragment |
R4999 | T16803 | T16804 | dep | which,inserted |
R5000 | T16804 | T16789 | relcl | inserted,fragment |
R5001 | T16805 | T16804 | auxpass | was,inserted |
R5002 | T16806 | T16804 | prep | into,inserted |
R5003 | T16807 | T16808 | det | the,vector |
R5004 | T16808 | T16806 | pobj | vector,into |
R5005 | T16809 | T16808 | compound | pPNT,vector |
R5006 | T16810 | T16804 | advmod | upstream,inserted |
R5007 | T16811 | T16810 | prep | of,upstream |
R5008 | T16812 | T16813 | det | the,cassette |
R5009 | T16813 | T16811 | pobj | cassette,of |
R5010 | T16814 | T16815 | compound | PGK,Neo |
R5011 | T16815 | T16813 | compound | Neo,cassette |
R5012 | T16816 | T16815 | punct | -,Neo |
R5013 | T16817 | T16818 | punct | [,48 |
R5014 | T16818 | T16804 | parataxis | 48,inserted |
R5015 | T16819 | T16818 | punct | ],48 |
R5016 | T16820 | T16781 | punct | .,provided |
R5017 | T16822 | T16823 | prep | During,abolished |
R5018 | T16824 | T16822 | pobj | cloning,During |
R5019 | T16825 | T16823 | punct | ", ",abolished |
R5020 | T16826 | T16827 | det | the,site |
R5021 | T16827 | T16823 | nsubjpass | site,abolished |
R5022 | T16828 | T16827 | compound | BamHI,site |
R5023 | T16829 | T16827 | prep | at,site |
R5024 | T16830 | T16831 | det | the,end |
R5025 | T16831 | T16829 | pobj | end,at |
R5026 | T16832 | T16831 | nummod | 3,end |
R5027 | T16833 | T16832 | punct | ',3 |
R5028 | T16834 | T16831 | prep | of,end |
R5029 | T16835 | T16836 | det | the,arm |
R5030 | T16836 | T16834 | pobj | arm,of |
R5031 | T16837 | T16836 | amod | short,arm |
R5032 | T16838 | T16823 | auxpass | was,abolished |
R5033 | T16839 | T16823 | punct | .,abolished |
R5034 | T16841 | T16842 | det | The,loss |
R5035 | T16842 | T16843 | nsubj | loss,provided |
R5036 | T16844 | T16842 | prep | of,loss |
R5037 | T16845 | T16846 | det | this,site |
R5038 | T16846 | T16844 | pobj | site,of |
R5039 | T16847 | T16846 | compound | BamHI,site |
R5040 | T16848 | T16842 | prep | in,loss |
R5041 | T16849 | T16850 | det | the,allele |
R5042 | T16850 | T16848 | pobj | allele,in |
R5043 | T16851 | T16850 | compound | mutant,allele |
R5044 | T16852 | T16842 | punct | ", ",loss |
R5045 | T16853 | T16842 | acl | coupled,loss |
R5046 | T16854 | T16853 | prep | with,coupled |
R5047 | T16855 | T16856 | det | the,introduction |
R5048 | T16856 | T16854 | pobj | introduction,with |
R5049 | T16857 | T16856 | prep | of,introduction |
R5050 | T16858 | T16859 | det | a,site |
R5051 | T16859 | T16857 | pobj | site,of |
R5052 | T16860 | T16859 | amod | new,site |
R5053 | T16861 | T16859 | compound | BamHI,site |
R5054 | T16862 | T16853 | prep | at,coupled |
R5055 | T16863 | T16864 | det | the,end |
R5056 | T16864 | T16862 | pobj | end,at |
R5057 | T16865 | T16864 | nummod | 3,end |
R5058 | T16866 | T16865 | punct | ',3 |
R5059 | T16867 | T16864 | prep | of,end |
R5060 | T16868 | T16869 | det | the,cassette |
R5061 | T16869 | T16867 | pobj | cassette,of |
R5062 | T16870 | T16871 | compound | PGK,Neo |
R5063 | T16871 | T16869 | compound | Neo,cassette |
R5064 | T16872 | T16871 | punct | -,Neo |
R5065 | T16873 | T16843 | punct | ", ",provided |
R5066 | T16874 | T16875 | det | a,basis |
R5067 | T16875 | T16843 | dobj | basis,provided |
R5068 | T16876 | T16875 | prep | for,basis |
R5069 | T16877 | T16876 | pcomp | distinguishing,for |
R5070 | T16878 | T16879 | det | the,alleles |
R5071 | T16879 | T16877 | dobj | alleles,distinguishing |
R5072 | T16880 | T16881 | amod | wild,type |
R5073 | T16881 | T16879 | nmod | type,alleles |
R5074 | T16882 | T16881 | punct | -,type |
R5075 | T16883 | T16881 | cc | and,type |
R5076 | T16884 | T16881 | conj | mutant,type |
R5077 | T16885 | T16877 | prep | by,distinguishing |
R5078 | T16886 | T16887 | compound | Southern,blotting |
R5079 | T16887 | T16885 | pobj | blotting,by |
R5080 | T16888 | T16843 | punct | .,provided |
R5081 | T16890 | T16891 | det | The,arm |
R5082 | T16891 | T16896 | nsubjpass | arm,provided |
R5083 | T16892 | T16891 | amod | long,arm |
R5084 | T16893 | T16891 | punct | (,arm |
R5085 | T16894 | T16891 | amod | downstream,arm |
R5086 | T16895 | T16891 | punct | ),arm |
R5087 | T16897 | T16891 | prep | of,arm |
R5088 | T16898 | T16897 | pobj | homology,of |
R5089 | T16899 | T16896 | auxpass | was,provided |
R5090 | T16900 | T16896 | agent | by,provided |
R5091 | T16901 | T16902 | det | a,fragment |
R5092 | T16902 | T16900 | pobj | fragment,by |
R5093 | T16903 | T16904 | nummod | 7,kb |
R5094 | T16904 | T16902 | compound | kb,fragment |
R5095 | T16905 | T16904 | punct | -,kb |
R5096 | T16906 | T16907 | compound | HindIII,KpnI |
R5097 | T16907 | T16902 | compound | KpnI,fragment |
R5098 | T16908 | T16907 | punct | -,KpnI |
R5099 | T16909 | T16902 | punct | ", ",fragment |
R5100 | T16910 | T16902 | acl | extending,fragment |
R5101 | T16911 | T16910 | prep | from,extending |
R5102 | T16912 | T16911 | pobj | intron,from |
R5103 | T16913 | T16912 | nummod | 7,intron |
R5104 | T16914 | T16911 | prep | to,from |
R5105 | T16915 | T16914 | pobj | intron,to |
R5106 | T16916 | T16915 | nummod | 12,intron |
R5107 | T16917 | T16902 | punct | ", ",fragment |
R5108 | T16918 | T16902 | acl | inserted,fragment |
R5109 | T16919 | T16918 | prep | between,inserted |
R5110 | T16920 | T16921 | det | the,cassettes |
R5111 | T16921 | T16919 | pobj | cassettes,between |
R5112 | T16922 | T16923 | nmod | PGK,Neo |
R5113 | T16923 | T16921 | nmod | Neo,cassettes |
R5114 | T16924 | T16923 | punct | -,Neo |
R5115 | T16925 | T16923 | cc | and,Neo |
R5116 | T16926 | T16927 | compound | thymidine,kinase |
R5117 | T16927 | T16923 | conj | kinase,Neo |
R5118 | T16928 | T16927 | punct | (,kinase |
R5119 | T16929 | T16927 | appos | tk,kinase |
R5120 | T16930 | T16921 | punct | ),cassettes |
R5121 | T16931 | T16896 | punct | .,provided |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16645 | 492-497 | PR:P23940 | denotes | BamHI |
T16644 | 457-465 | SO:0005853 | denotes | cassette |
T16643 | 426-432 | SO:0000440 | denotes | vector |
T16642 | 378-383 | SO:0000147 | denotes | exons |
T16641 | 351-356 | PR:P23940 | denotes | BamHI |
T16640 | 343-350 | PR:P43870 | denotes | HindIII |
T16639 | 154-158 | SO:0000147 | denotes | Exon |
T16638 | 133-141 | SO:0005853 | denotes | cassette |
T16637 | 110-114 | SO:0000704 | denotes | gene |
T16636 | 104-109 | PR:000005015 | denotes | Capn2 |
T16635 | 90-94 | SO:0000147 | denotes | exon |
T16634 | 61-68 | PR:P43870 | denotes | HindIII |
T16633 | 55-60 | PR:P23940 | denotes | BamHI |
T16632 | 52-54 | SO:0000028 | denotes | bp |
T16654 | 956-965 | SO:0005853 | denotes | cassettes |
T16653 | 890-896 | SO:0000188 | denotes | intron |
T16652 | 878-884 | SO:0000188 | denotes | intron |
T16651 | 840-847 | PR:P43870 | denotes | HindIII |
T16650 | 749-756 | SO:0001023 | denotes | alleles |
T16649 | 678-686 | SO:0005853 | denotes | cassette |
T16648 | 638-643 | PR:P23940 | denotes | BamHI |
T16647 | 591-597 | SO:0001023 | denotes | allele |
T16646 | 566-571 | PR:P23940 | denotes | BamHI |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T16708 | 956-965 | SO_EXT:0005853 | denotes | cassettes |
T16707 | 952-954 | GO_PR_EXT:thymidine_kinase | denotes | tk |
T16706 | 934-950 | GO_PR_EXT:thymidine_kinase | denotes | thymidine kinase |
T16705 | 934-943 | CHEBI_EXT:thymine_nucleobase_or_nucleoside_or_nucleotide_molecular_entity_or_group | denotes | thymidine |
T16704 | 926-929 | CHEBI_GO_EXT:neomycin_or_neomycin_phosphotransferase | denotes | Neo |
T16703 | 922-925 | GO_EXT:phosphoglycerate_kinase | denotes | PGK |
T16702 | 901-909 | SO_EXT:sequence_insertion_process | denotes | inserted |
T16701 | 890-896 | SO_EXT:0000188 | denotes | intron |
T16700 | 878-884 | SO_EXT:0000188 | denotes | intron |
T16699 | 840-847 | PR_EXT:P43870 | denotes | HindIII |
T16698 | 838-839 | CHEBI_SO_EXT:base | denotes | b |
T16697 | 789-799 | SO_EXT:sequence_downstreamness | denotes | downstream |
T16696 | 749-756 | SO_EXT:0001023 | denotes | alleles |
T16679 | 403-411 | SO_EXT:sequence_insertion_process | denotes | inserted |
T16677 | 351-356 | PR_EXT:P23940 | denotes | BamHI |
T16676 | 343-350 | PR_EXT:P43870 | denotes | HindIII |
T16675 | 341-342 | CHEBI_SO_EXT:base | denotes | b |
T16674 | 308-317 | SO_EXT:engineered_biological_sequence | denotes | construct |
T16673 | 277-285 | SO_EXT:sequence_upstreamness | denotes | upstream |
T16672 | 256-264 | CHEBI_EXT:residue | denotes | residues |
T16671 | 240-249 | GO_MOP_EXT:catalysis | denotes | catalytic |
T16670 | 172-183 | CHEBI_SO_EXT:amino_acid | denotes | amino acids |
T16669 | 161-168 | SO_EXT:sequence_coding_function | denotes | encodes |
T16668 | 154-158 | SO_EXT:0000147 | denotes | Exon |
T16667 | 133-141 | SO_EXT:0005853 | denotes | cassette |
T16666 | 129-132 | CHEBI_GO_EXT:neomycin_or_neomycin_phosphotransferase | denotes | Neo |
T16665 | 125-128 | GO_EXT:phosphoglycerate_kinase | denotes | PGK |
T16664 | 110-114 | SO_EXT:0000704 | denotes | gene |
T16663 | 104-109 | PR_EXT:000005015 | denotes | Capn2 |
T16662 | 90-94 | SO_EXT:0000147 | denotes | exon |
T16661 | 61-68 | PR_EXT:P43870 | denotes | HindIII |
T16660 | 55-60 | PR_EXT:P23940 | denotes | BamHI |
T16659 | 52-54 | SO_EXT:0000028 | denotes | bp |
T16658 | 38-45 | SO_EXT:sequence_substitution_process | denotes | replace |
T16657 | 12-21 | SO_EXT:engineered_biological_sequence | denotes | construct |
T16695 | 742-748 | SO_EXT:sequence_altered_entity_or_alteration_process | denotes | mutant |
T16694 | 728-737 | SO_EXT:wild_type_entity_or_quality | denotes | wild-type |
T16693 | 678-686 | SO_EXT:0005853 | denotes | cassette |
T16692 | 674-677 | CHEBI_GO_EXT:neomycin_or_neomycin_phosphotransferase | denotes | Neo |
T16691 | 670-673 | GO_EXT:phosphoglycerate_kinase | denotes | PGK |
T16690 | 638-643 | PR_EXT:P23940 | denotes | BamHI |
T16689 | 591-597 | SO_EXT:0001023 | denotes | allele |
T16688 | 584-590 | SO_EXT:sequence_altered_entity_or_alteration_process | denotes | mutant |
T16687 | 566-571 | PR_EXT:P23940 | denotes | BamHI |
T16686 | 492-497 | PR_EXT:P23940 | denotes | BamHI |
T16685 | 479-486 | SO_EXT:sequence_cloning_process | denotes | cloning |
T16684 | 457-465 | SO_EXT:0005853 | denotes | cassette |
T16683 | 453-456 | CHEBI_GO_EXT:neomycin_or_neomycin_phosphotransferase | denotes | Neo |
T16682 | 449-452 | GO_EXT:phosphoglycerate_kinase | denotes | PGK |
T16681 | 433-441 | SO_EXT:sequence_upstreamness | denotes | upstream |
T16680 | 426-432 | SO_EXT:0000440 | denotes | vector |
T16678 | 378-383 | SO_EXT:0000147 | denotes | exons |