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PMC:1382200 / 20471-20669 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T13606 197-198 . denotes .
T13605 196-197 -RRB- denotes ]
T13604 194-196 CD denotes 31
T13603 193-194 -LRB- denotes [
T13602 175-183 NN denotes promoter
T13601 171-174 NN denotes PGK
T13600 184-192 NN denotes sequence
T13599 167-170 DT denotes the
T13598 164-166 IN denotes in
T13597 151-157 NN denotes splice
T13596 143-150 JJ denotes cryptic
T13595 133-142 JJ denotes different
T13594 158-163 NNS denotes sites
T13593 123-128 RBS denotes least
T13592 129-132 CD denotes two
T13591 120-122 RB denotes at
T13590 117-119 IN denotes to
T13589 115-116 CD denotes 9
T13588 110-114 NN denotes exon
T13587 107-109 IN denotes of
T13586 96-101 JJ denotes first
T13585 102-106 NN denotes half
T13584 92-95 DT denotes the
T13583 87-91 IN denotes from
T13582 79-86 RB denotes through
T13581 71-78 VBG denotes reading
T13580 69-71 , denotes ,
T13579 65-66 HYPH denotes -
T13578 66-69 NN denotes PCR
T13577 63-65 NN denotes RT
T13576 60-62 IN denotes by
T13575 49-59 JJ denotes detectable
T13574 47-49 , denotes ,
T13573 35-39 NN denotes mRNA
T13572 40-47 NNS denotes species
T13571 26-34 JJ denotes multiple
T13570 23-25 IN denotes to
T13569 18-22 NN denotes rise
T13568 13-17 VBD denotes gave
T13567 6-12 NN denotes allele
T13566 1-5 DT denotes This
T13565 0-198 sentence denotes This allele gave rise to multiple mRNA species, detectable by RT-PCR, reading through from the first half of exon 9 to at least two different cryptic splice sites in the PGK promoter sequence [31].
R3063 T13566 T13567 det This,allele
R3064 T13567 T13568 nsubj allele,gave
R3066 T13569 T13568 dobj rise,gave
R3068 T13570 T13568 prep to,gave
R3069 T13571 T13572 amod multiple,species
R3070 T13572 T13570 pobj species,to
R3071 T13573 T13572 compound mRNA,species
R3073 T13574 T13572 punct ", ",species
R3074 T13575 T13572 amod detectable,species
R3075 T13576 T13575 prep by,detectable
R3076 T13577 T13578 compound RT,PCR
R3078 T13578 T13576 pobj PCR,by
R3079 T13579 T13578 punct -,PCR
R3080 T13580 T13568 punct ", ",gave
R3082 T13581 T13568 advcl reading,gave
R3083 T13582 T13581 advmod through,reading
R3084 T13583 T13581 prep from,reading
R3085 T13584 T13585 det the,half
R3086 T13585 T13583 pobj half,from
R3088 T13586 T13585 amod first,half
R3089 T13587 T13585 prep of,half
R3090 T13588 T13587 pobj exon,of
R3093 T13589 T13588 nummod 9,exon
R3094 T13590 T13583 prep to,from
R3096 T13591 T13592 advmod at,two
R3097 T13592 T13594 nummod two,sites
R3098 T13593 T13592 advmod least,two
R3100 T13594 T13590 pobj sites,to
R3101 T13595 T13594 amod different,sites
R3102 T13596 T13594 amod cryptic,sites
R3103 T13597 T13594 compound splice,sites
R3105 T13598 T13594 prep in,sites
R3106 T13599 T13600 det the,sequence
R3108 T13600 T13598 pobj sequence,in
R3109 T13601 T13600 compound PGK,sequence
R3110 T13602 T13600 compound promoter,sequence
R3112 T13603 T13604 punct [,31
R3113 T13604 T13581 parataxis 31,reading
R3114 T13605 T13604 punct ],31
R3116 T13606 T13568 punct .,gave

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12267 175-183 SO:0000167 denotes promoter
T12266 151-163 SO:0000162 denotes splice sites
T12265 151-157 GO:0008380 denotes splice
T12264 143-150 SO:0000976 denotes cryptic
T12263 110-114 SO:0000147 denotes exon
T12262 6-12 SO:0001023 denotes allele

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T12533 184-192 SO_EXT:biological_sequence denotes sequence
T12532 175-183 SO_EXT:0000167 denotes promoter
T12531 171-174 GO_EXT:phosphoglycerate_kinase denotes PGK
T12530 151-163 SO_EXT:0000162 denotes splice sites
T12529 151-157 GO:0008380 denotes splice
T12528 143-150 SO:0000976 denotes cryptic
T12527 110-114 SO_EXT:0000147 denotes exon
T12526 63-65 GO_EXT:reverse_transcription_or_reverse_transcriptase denotes RT
T12525 35-39 CHEBI_SO_EXT:mRNA denotes mRNA
T12524 6-12 SO_EXT:0001023 denotes allele