PMC:1382200 / 18902-19138 JSONTXT

Annnotations TAB JSON ListView MergeView

{"target":"https://pubannotation.org/docs/sourcedb/PMC/sourceid/1382200","sourcedb":"PMC","sourceid":"1382200","source_url":"http://www.ncbi.nlm.nih.gov/pmc/1382200","text":" The Capn4 targeting strategy employed by Arthur and colleagues involved disrupting the C-terminus of the calpain small subunit by insertion of the PGK-Neo cassette into the middle of exon 9, which caused truncation of the protein [31].","tracks":[{"project":"craft-sa-dev","denotations":[{"id":"T13320","span":{"begin":235,"end":236},"obj":"."},{"id":"T13319","span":{"begin":234,"end":235},"obj":"-RRB-"},{"id":"T13318","span":{"begin":232,"end":234},"obj":"CD"},{"id":"T13317","span":{"begin":231,"end":232},"obj":"-LRB-"},{"id":"T13316","span":{"begin":223,"end":230},"obj":"NN"},{"id":"T13315","span":{"begin":219,"end":222},"obj":"DT"},{"id":"T13314","span":{"begin":216,"end":218},"obj":"IN"},{"id":"T13313","span":{"begin":205,"end":215},"obj":"NN"},{"id":"T13312","span":{"begin":198,"end":204},"obj":"VBD"},{"id":"T13311","span":{"begin":192,"end":197},"obj":"WDT"},{"id":"T13310","span":{"begin":190,"end":192},"obj":","},{"id":"T13309","span":{"begin":189,"end":190},"obj":"CD"},{"id":"T13308","span":{"begin":184,"end":188},"obj":"NN"},{"id":"T13282","span":{"begin":39,"end":41},"obj":"IN"},{"id":"T13281","span":{"begin":30,"end":38},"obj":"VBN"},{"id":"T13280","span":{"begin":64,"end":72},"obj":"VBN"},{"id":"T13279","span":{"begin":11,"end":20},"obj":"NN"},{"id":"T13278","span":{"begin":5,"end":10},"obj":"NN"},{"id":"T13277","span":{"begin":21,"end":29},"obj":"NN"},{"id":"T13276","span":{"begin":1,"end":4},"obj":"DT"},{"id":"T13275","span":{"begin":0,"end":236},"obj":"sentence"},{"id":"T13307","span":{"begin":181,"end":183},"obj":"IN"},{"id":"T13306","span":{"begin":174,"end":180},"obj":"NN"},{"id":"T13305","span":{"begin":170,"end":173},"obj":"DT"},{"id":"T13304","span":{"begin":165,"end":169},"obj":"IN"},{"id":"T13303","span":{"begin":151,"end":152},"obj":"HYPH"},{"id":"T13302","span":{"begin":152,"end":155},"obj":"NN"},{"id":"T13301","span":{"begin":148,"end":151},"obj":"NN"},{"id":"T13300","span":{"begin":156,"end":164},"obj":"NN"},{"id":"T13299","span":{"begin":144,"end":147},"obj":"DT"},{"id":"T13298","span":{"begin":141,"end":143},"obj":"IN"},{"id":"T13297","span":{"begin":131,"end":140},"obj":"NN"},{"id":"T13296","span":{"begin":128,"end":130},"obj":"IN"},{"id":"T13295","span":{"begin":114,"end":119},"obj":"JJ"},{"id":"T13294","span":{"begin":106,"end":113},"obj":"NN"},{"id":"T13293","span":{"begin":120,"end":127},"obj":"NN"},{"id":"T13292","span":{"begin":102,"end":105},"obj":"DT"},{"id":"T13291","span":{"begin":99,"end":101},"obj":"IN"},{"id":"T13290","span":{"begin":89,"end":90},"obj":"HYPH"},{"id":"T13289","span":{"begin":88,"end":89},"obj":"NN"},{"id":"T13288","span":{"begin":90,"end":98},"obj":"NN"},{"id":"T13287","span":{"begin":84,"end":87},"obj":"DT"},{"id":"T13286","span":{"begin":73,"end":83},"obj":"VBG"},{"id":"T13285","span":{"begin":53,"end":63},"obj":"NNS"},{"id":"T13284","span":{"begin":49,"end":52},"obj":"CC"},{"id":"T13283","span":{"begin":42,"end":48},"obj":"NNP"}],"relations":[{"id":"R2739","pred":"det","subj":"T13299","obj":"T13300"},{"id":"R2744","pred":"pobj","subj":"T13300","obj":"T13298"},{"id":"R2748","pred":"compound","subj":"T13301","obj":"T13302"},{"id":"R2753","pred":"compound","subj":"T13302","obj":"T13300"},{"id":"R2757","pred":"punct","subj":"T13303","obj":"T13302"},{"id":"R2758","pred":"prep","subj":"T13304","obj":"T13297"},{"id":"R2760","pred":"det","subj":"T13305","obj":"T13306"},{"id":"R2763","pred":"pobj","subj":"T13306","obj":"T13304"},{"id":"R2765","pred":"prep","subj":"T13307","obj":"T13306"},{"id":"R2767","pred":"pobj","subj":"T13308","obj":"T13307"},{"id":"R2775","pred":"nummod","subj":"T13309","obj":"T13308"},{"id":"R2779","pred":"punct","subj":"T13310","obj":"T13297"},{"id":"R2782","pred":"dep","subj":"T13311","obj":"T13312"},{"id":"R2786","pred":"relcl","subj":"T13312","obj":"T13297"},{"id":"R2788","pred":"dobj","subj":"T13313","obj":"T13312"},{"id":"R2789","pred":"prep","subj":"T13314","obj":"T13313"},{"id":"R2792","pred":"det","subj":"T13315","obj":"T13316"},{"id":"R2795","pred":"pobj","subj":"T13316","obj":"T13314"},{"id":"R2799","pred":"punct","subj":"T13317","obj":"T13318"},{"id":"R2802","pred":"parataxis","subj":"T13318","obj":"T13312"},{"id":"R2805","pred":"punct","subj":"T13319","obj":"T13318"},{"id":"R2807","pred":"punct","subj":"T13320","obj":"T13280"},{"id":"R2830","pred":"det","subj":"T13276","obj":"T13277"},{"id":"R2831","pred":"nsubj","subj":"T13277","obj":"T13280"},{"id":"R2833","pred":"compound","subj":"T13278","obj":"T13277"},{"id":"R2834","pred":"compound","subj":"T13279","obj":"T13277"},{"id":"R2836","pred":"acl","subj":"T13281","obj":"T13277"},{"id":"R2837","pred":"agent","subj":"T13282","obj":"T13281"},{"id":"R2838","pred":"pobj","subj":"T13283","obj":"T13282"},{"id":"R2839","pred":"cc","subj":"T13284","obj":"T13283"},{"id":"R2840","pred":"conj","subj":"T13285","obj":"T13283"},{"id":"R2842","pred":"xcomp","subj":"T13286","obj":"T13280"},{"id":"R2843","pred":"det","subj":"T13287","obj":"T13288"},{"id":"R2844","pred":"dobj","subj":"T13288","obj":"T13286"},{"id":"R2846","pred":"compound","subj":"T13289","obj":"T13288"},{"id":"R2847","pred":"punct","subj":"T13290","obj":"T13288"},{"id":"R2848","pred":"prep","subj":"T13291","obj":"T13288"},{"id":"R2849","pred":"det","subj":"T13292","obj":"T13293"},{"id":"R2851","pred":"pobj","subj":"T13293","obj":"T13291"},{"id":"R2852","pred":"nmod","subj":"T13294","obj":"T13293"},{"id":"R2854","pred":"amod","subj":"T13295","obj":"T13293"},{"id":"R2855","pred":"agent","subj":"T13296","obj":"T13286"},{"id":"R2856","pred":"pobj","subj":"T13297","obj":"T13296"},{"id":"R2858","pred":"prep","subj":"T13298","obj":"T13297"}],"attributes":[{"subj":"T13320","pred":"source","obj":"craft-sa-dev"},{"subj":"T13319","pred":"source","obj":"craft-sa-dev"},{"subj":"T13318","pred":"source","obj":"craft-sa-dev"},{"subj":"T13317","pred":"source","obj":"craft-sa-dev"},{"subj":"T13316","pred":"source","obj":"craft-sa-dev"},{"subj":"T13315","pred":"source","obj":"craft-sa-dev"},{"subj":"T13314","pred":"source","obj":"craft-sa-dev"},{"subj":"T13313","pred":"source","obj":"craft-sa-dev"},{"subj":"T13312","pred":"source","obj":"craft-sa-dev"},{"subj":"T13311","pred":"source","obj":"craft-sa-dev"},{"subj":"T13310","pred":"source","obj":"craft-sa-dev"},{"subj":"T13309","pred":"source","obj":"craft-sa-dev"},{"subj":"T13308","pred":"source","obj":"craft-sa-dev"},{"subj":"T13282","pred":"source","obj":"craft-sa-dev"},{"subj":"T13281","pred":"source","obj":"craft-sa-dev"},{"subj":"T13280","pred":"source","obj":"craft-sa-dev"},{"subj":"T13279","pred":"source","obj":"craft-sa-dev"},{"subj":"T13278","pred":"source","obj":"craft-sa-dev"},{"subj":"T13277","pred":"source","obj":"craft-sa-dev"},{"subj":"T13276","pred":"source","obj":"craft-sa-dev"},{"subj":"T13275","pred":"source","obj":"craft-sa-dev"},{"subj":"T13307","pred":"source","obj":"craft-sa-dev"},{"subj":"T13306","pred":"source","obj":"craft-sa-dev"},{"subj":"T13305","pred":"source","obj":"craft-sa-dev"},{"subj":"T13304","pred":"source","obj":"craft-sa-dev"},{"subj":"T13303","pred":"source","obj":"craft-sa-dev"},{"subj":"T13302","pred":"source","obj":"craft-sa-dev"},{"subj":"T13301","pred":"source","obj":"craft-sa-dev"},{"subj":"T13300","pred":"source","obj":"craft-sa-dev"},{"subj":"T13299","pred":"source","obj":"craft-sa-dev"},{"subj":"T13298","pred":"source","obj":"craft-sa-dev"},{"subj":"T13297","pred":"source","obj":"craft-sa-dev"},{"subj":"T13296","pred":"source","obj":"craft-sa-dev"},{"subj":"T13295","pred":"source","obj":"craft-sa-dev"},{"subj":"T13294","pred":"source","obj":"craft-sa-dev"},{"subj":"T13293","pred":"source","obj":"craft-sa-dev"},{"subj":"T13292","pred":"source","obj":"craft-sa-dev"},{"subj":"T13291","pred":"source","obj":"craft-sa-dev"},{"subj":"T13290","pred":"source","obj":"craft-sa-dev"},{"subj":"T13289","pred":"source","obj":"craft-sa-dev"},{"subj":"T13288","pred":"source","obj":"craft-sa-dev"},{"subj":"T13287","pred":"source","obj":"craft-sa-dev"},{"subj":"T13286","pred":"source","obj":"craft-sa-dev"},{"subj":"T13285","pred":"source","obj":"craft-sa-dev"},{"subj":"T13284","pred":"source","obj":"craft-sa-dev"},{"subj":"T13283","pred":"source","obj":"craft-sa-dev"}]},{"project":"craft-ca-core-dev","denotations":[{"id":"T12241","span":{"begin":184,"end":188},"obj":"SO:0000147"},{"id":"T12240","span":{"begin":156,"end":164},"obj":"SO:0005853"},{"id":"T12239","span":{"begin":106,"end":127},"obj":"PR:000005022"},{"id":"T12238","span":{"begin":5,"end":10},"obj":"PR:000005022"}],"attributes":[{"subj":"T12241","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T12240","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T12239","pred":"source","obj":"craft-ca-core-dev"},{"subj":"T12238","pred":"source","obj":"craft-ca-core-dev"}]},{"project":"craft-ca-core-ex-dev","denotations":[{"id":"T12488","span":{"begin":223,"end":230},"obj":"CHEBI_PR_EXT:protein"},{"id":"T12487","span":{"begin":205,"end":215},"obj":"SO_EXT:sequence_truncation_entity_or_process"},{"id":"T12486","span":{"begin":184,"end":188},"obj":"SO_EXT:0000147"},{"id":"T12485","span":{"begin":156,"end":164},"obj":"SO_EXT:0005853"},{"id":"T12484","span":{"begin":152,"end":155},"obj":"CHEBI_GO_EXT:neomycin_or_neomycin_phosphotransferase"},{"id":"T12483","span":{"begin":148,"end":151},"obj":"GO_EXT:phosphoglycerate_kinase"},{"id":"T12482","span":{"begin":131,"end":140},"obj":"SO_EXT:sequence_insertion_entity_or_process"},{"id":"T12481","span":{"begin":106,"end":127},"obj":"PR_EXT:000005022"},{"id":"T12480","span":{"begin":88,"end":98},"obj":"CHEBI_SO_EXT:C_terminus_or_C_terminal_region"},{"id":"T12479","span":{"begin":5,"end":10},"obj":"PR_EXT:000005022"}],"attributes":[{"subj":"T12488","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T12487","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T12486","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T12485","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T12484","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T12483","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T12482","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T12481","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T12480","pred":"source","obj":"craft-ca-core-ex-dev"},{"subj":"T12479","pred":"source","obj":"craft-ca-core-ex-dev"}]}],"config":{"attribute types":[{"pred":"source","value type":"selection","values":[{"id":"craft-sa-dev","color":"#cd93ec","default":true},{"id":"craft-ca-core-dev","color":"#93ecb3"},{"id":"craft-ca-core-ex-dev","color":"#ec9993"}]}]}}