
PMC:1382200 / 15828-16444
Annnotations
craft-sa-dev
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7801 | 385-394 | NN | denotes | inability |
T7800 | 381-384 | DT | denotes | The |
T7799 | 380-616 | sentence | denotes | The inability to isolate Capn2-/- ES cells, in concert with the absence of Capn2-/- embryos beyond the 8-cell stage, suggested that m-calpain activity might be essential for cell viability or the establishment of viable ES cell clones. |
T7798 | 379-380 | . | denotes | . |
T7797 | 362-363 | HYPH | denotes | - |
T7796 | 363-372 | JJ | denotes | resistant |
T7795 | 358-362 | NN | denotes | drug |
T7794 | 373-379 | NNS | denotes | clones |
T7793 | 354-357 | CD | denotes | 126 |
T7792 | 351-353 | IN | denotes | of |
T7791 | 343-350 | NNS | denotes | screens |
T7790 | 340-342 | IN | denotes | in |
T7789 | 326-330 | VBD | denotes | were |
T7788 | 317-319 | NN | denotes | ES |
T7787 | 315-316 | SYM | denotes | - |
T7786 | 314-315 | HYPH | denotes | / |
T7785 | 313-314 | SYM | denotes | - |
T7784 | 308-313 | NN | denotes | Capn2 |
T7783 | 320-325 | NNS | denotes | cells |
T7782 | 305-307 | DT | denotes | no |
T7781 | 303-305 | , | denotes | , |
T7780 | 296-303 | RB | denotes | however |
T7779 | 294-296 | , | denotes | , |
T7778 | 290-294 | NN | denotes | case |
T7777 | 285-289 | DT | denotes | this |
T7776 | 331-339 | VBN | denotes | isolated |
T7775 | 282-284 | IN | denotes | In |
T7774 | 281-380 | sentence | denotes | In this case, however, no Capn2-/- ES cells were isolated in screens of 126 drug-resistant clones. |
T7773 | 280-281 | . | denotes | . |
T7772 | 279-280 | -RRB- | denotes | ] |
T7771 | 277-279 | CD | denotes | 31 |
T7770 | 276-277 | -LRB- | denotes | [ |
T7769 | 267-269 | NN | denotes | ES |
T7768 | 265-266 | SYM | denotes | - |
T7767 | 264-265 | HYPH | denotes | / |
T7766 | 263-264 | SYM | denotes | + |
T7765 | 270-275 | NNS | denotes | cells |
T7764 | 258-263 | NN | denotes | Capn4 |
T7763 | 255-257 | IN | denotes | of |
T7762 | 250-254 | NN | denotes | case |
T7761 | 246-249 | DT | denotes | the |
T7760 | 243-245 | IN | denotes | in |
T7759 | 226-233 | RB | denotes | readily |
T7758 | 234-242 | VBN | denotes | achieved |
T7757 | 222-225 | VBD | denotes | was |
T7756 | 218-221 | CC | denotes | and |
T7755 | 209-211 | NN | denotes | ES |
T7754 | 212-217 | NNS | denotes | cells |
T7753 | 200-208 | VBN | denotes | targeted |
T7752 | 197-199 | IN | denotes | to |
T7751 | 177-188 | RB | denotes | extensively |
T7750 | 172-176 | VBN | denotes | been |
T7749 | 168-171 | VBZ | denotes | has |
T7748 | 189-196 | VBN | denotes | applied |
T7747 | 158-167 | NN | denotes | procedure |
T7746 | 153-157 | DT | denotes | This |
T7745 | 152-281 | sentence | denotes | This procedure has been extensively applied to targeted ES cells and was readily achieved in the case of Capn4+/- ES cells [31]. |
T7744 | 151-152 | . | denotes | . |
T7743 | 141-151 | NN | denotes | conversion |
T7742 | 136-140 | NN | denotes | gene |
T7741 | 133-135 | IN | denotes | by |
T7740 | 120-126 | NN | denotes | mutant |
T7739 | 127-132 | NNS | denotes | cells |
T7738 | 109-119 | JJ | denotes | homozygous |
T7737 | 100-108 | VB | denotes | generate |
T7736 | 97-99 | TO | denotes | to |
T7735 | 88-96 | NNS | denotes | attempts |
T7734 | 85-87 | IN | denotes | in |
T7733 | 77-79 | NN | denotes | mL |
T7732 | 76-77 | SYM | denotes | / |
T7731 | 80-84 | NN | denotes | G418 |
T7730 | 74-76 | NN | denotes | mg |
T7729 | 72-73 | CD | denotes | 2 |
T7728 | 69-71 | IN | denotes | of |
T7727 | 60-68 | NN | denotes | presence |
T7726 | 56-59 | DT | denotes | the |
T7725 | 53-55 | IN | denotes | in |
T7724 | 43-52 | NN | denotes | selection |
T7723 | 36-42 | JJ | denotes | clonal |
T7722 | 33-35 | IN | denotes | to |
T7721 | 18-22 | VBD | denotes | were |
T7720 | 23-32 | VBN | denotes | subjected |
T7719 | 9-11 | NN | denotes | ES |
T7718 | 7-8 | SYM | denotes | - |
T7717 | 6-7 | HYPH | denotes | / |
T7716 | 5-6 | SYM | denotes | + |
T7715 | 12-17 | NNS | denotes | cells |
T7714 | 0-5 | NN | denotes | Capn2 |
T7849 | 615-616 | . | denotes | . |
T7848 | 604-608 | NN | denotes | cell |
T7847 | 601-603 | NN | denotes | ES |
T7846 | 609-615 | NNS | denotes | clones |
T7845 | 594-600 | JJ | denotes | viable |
T7844 | 591-593 | IN | denotes | of |
T7843 | 577-590 | NN | denotes | establishment |
T7842 | 573-576 | DT | denotes | the |
T7841 | 570-572 | CC | denotes | or |
T7840 | 560-569 | NN | denotes | viability |
T7839 | 555-559 | NN | denotes | cell |
T7838 | 551-554 | IN | denotes | for |
T7837 | 541-550 | JJ | denotes | essential |
T7836 | 532-537 | MD | denotes | might |
T7835 | 523-531 | NN | denotes | activity |
T7834 | 514-515 | HYPH | denotes | - |
T7833 | 515-522 | NN | denotes | calpain |
T7832 | 513-514 | NN | denotes | m |
T7831 | 538-540 | VB | denotes | be |
T7830 | 508-512 | IN | denotes | that |
T7829 | 496-498 | , | denotes | , |
T7828 | 485-486 | HYPH | denotes | - |
T7827 | 486-490 | NN | denotes | cell |
T7826 | 484-485 | CD | denotes | 8 |
T7825 | 491-496 | NN | denotes | stage |
T7824 | 480-483 | DT | denotes | the |
T7823 | 473-479 | IN | denotes | beyond |
T7822 | 463-464 | SYM | denotes | - |
T7821 | 462-463 | HYPH | denotes | / |
T7820 | 461-462 | SYM | denotes | - |
T7819 | 465-472 | NNS | denotes | embryos |
T7818 | 456-461 | NN | denotes | Capn2 |
T7817 | 453-455 | IN | denotes | of |
T7816 | 445-452 | NN | denotes | absence |
T7815 | 441-444 | DT | denotes | the |
T7814 | 436-440 | IN | denotes | with |
T7813 | 428-435 | NN | denotes | concert |
T7812 | 425-427 | IN | denotes | in |
T7811 | 423-425 | , | denotes | , |
T7810 | 415-417 | NN | denotes | ES |
T7809 | 413-414 | SYM | denotes | - |
T7808 | 412-413 | HYPH | denotes | / |
T7807 | 411-412 | SYM | denotes | - |
T7806 | 418-423 | NNS | denotes | cells |
T7805 | 406-411 | NN | denotes | Capn2 |
T7804 | 398-405 | VB | denotes | isolate |
T7803 | 395-397 | TO | denotes | to |
T7802 | 498-507 | VBD | denotes | suggested |
R2229 | T7714 | T7715 | nmod | Capn2,cells |
R2230 | T7715 | T7720 | nsubjpass | cells,subjected |
R2231 | T7716 | T7714 | punct | +,Capn2 |
R2232 | T7717 | T7714 | punct | /,Capn2 |
R2233 | T7718 | T7714 | punct | -,Capn2 |
R2234 | T7719 | T7715 | compound | ES,cells |
R2235 | T7721 | T7720 | auxpass | were,subjected |
R2236 | T7722 | T7720 | prep | to,subjected |
R2237 | T7723 | T7724 | amod | clonal,selection |
R2238 | T7724 | T7722 | pobj | selection,to |
R2239 | T7725 | T7720 | prep | in,subjected |
R2240 | T7726 | T7727 | det | the,presence |
R2241 | T7727 | T7725 | pobj | presence,in |
R2242 | T7728 | T7727 | prep | of,presence |
R2243 | T7729 | T7730 | nummod | 2,mg |
R2244 | T7730 | T7731 | nmod | mg,G418 |
R2245 | T7731 | T7728 | pobj | G418,of |
R2246 | T7732 | T7733 | punct | /,mL |
R2247 | T7733 | T7730 | prep | mL,mg |
R2248 | T7734 | T7727 | prep | in,presence |
R2249 | T7735 | T7734 | pobj | attempts,in |
R2250 | T7736 | T7737 | aux | to,generate |
R2251 | T7737 | T7735 | acl | generate,attempts |
R2252 | T7738 | T7739 | amod | homozygous,cells |
R2253 | T7739 | T7737 | dobj | cells,generate |
R2254 | T7740 | T7739 | compound | mutant,cells |
R2255 | T7741 | T7737 | prep | by,generate |
R2256 | T7742 | T7743 | compound | gene,conversion |
R2257 | T7743 | T7741 | pobj | conversion,by |
R2258 | T7744 | T7720 | punct | .,subjected |
R2259 | T7746 | T7747 | det | This,procedure |
R2260 | T7747 | T7748 | nsubjpass | procedure,applied |
R2261 | T7749 | T7748 | aux | has,applied |
R2262 | T7750 | T7748 | auxpass | been,applied |
R2263 | T7751 | T7748 | advmod | extensively,applied |
R2264 | T7752 | T7748 | prep | to,applied |
R2265 | T7753 | T7754 | amod | targeted,cells |
R2266 | T7754 | T7752 | pobj | cells,to |
R2267 | T7755 | T7754 | compound | ES,cells |
R2268 | T7756 | T7748 | cc | and,applied |
R2269 | T7757 | T7758 | auxpass | was,achieved |
R2270 | T7758 | T7748 | conj | achieved,applied |
R2271 | T7759 | T7758 | advmod | readily,achieved |
R2272 | T7760 | T7758 | prep | in,achieved |
R2273 | T7761 | T7762 | det | the,case |
R2274 | T7762 | T7760 | pobj | case,in |
R2275 | T7763 | T7762 | prep | of,case |
R2276 | T7764 | T7765 | nmod | Capn4,cells |
R2277 | T7765 | T7763 | pobj | cells,of |
R2278 | T7766 | T7764 | punct | +,Capn4 |
R2279 | T7767 | T7764 | punct | /,Capn4 |
R2280 | T7768 | T7764 | punct | -,Capn4 |
R2281 | T7769 | T7765 | compound | ES,cells |
R2282 | T7770 | T7771 | punct | [,31 |
R2283 | T7771 | T7758 | parataxis | 31,achieved |
R2284 | T7772 | T7771 | punct | ],31 |
R2285 | T7773 | T7748 | punct | .,applied |
R2286 | T7775 | T7776 | prep | In,isolated |
R2287 | T7777 | T7778 | det | this,case |
R2288 | T7778 | T7775 | pobj | case,In |
R2289 | T7779 | T7776 | punct | ", ",isolated |
R2290 | T7780 | T7776 | advmod | however,isolated |
R2291 | T7781 | T7776 | punct | ", ",isolated |
R2292 | T7782 | T7783 | det | no,cells |
R2293 | T7783 | T7776 | nsubjpass | cells,isolated |
R2294 | T7784 | T7783 | nmod | Capn2,cells |
R2295 | T7785 | T7784 | punct | -,Capn2 |
R2296 | T7786 | T7784 | punct | /,Capn2 |
R2297 | T7787 | T7784 | punct | -,Capn2 |
R2298 | T7788 | T7783 | compound | ES,cells |
R2299 | T7789 | T7776 | auxpass | were,isolated |
R2300 | T7790 | T7776 | prep | in,isolated |
R2301 | T7791 | T7790 | pobj | screens,in |
R2302 | T7792 | T7791 | prep | of,screens |
R2303 | T7793 | T7794 | nummod | 126,clones |
R2304 | T7794 | T7792 | pobj | clones,of |
R2305 | T7795 | T7796 | npadvmod | drug,resistant |
R2306 | T7796 | T7794 | amod | resistant,clones |
R2307 | T7797 | T7796 | punct | -,resistant |
R2308 | T7798 | T7776 | punct | .,isolated |
R2309 | T7800 | T7801 | det | The,inability |
R2310 | T7801 | T7802 | nsubj | inability,suggested |
R2311 | T7803 | T7804 | aux | to,isolate |
R2312 | T7804 | T7801 | acl | isolate,inability |
R2313 | T7805 | T7806 | nmod | Capn2,cells |
R2314 | T7806 | T7804 | dobj | cells,isolate |
R2315 | T7807 | T7805 | punct | -,Capn2 |
R2316 | T7808 | T7805 | punct | /,Capn2 |
R2317 | T7809 | T7805 | punct | -,Capn2 |
R2318 | T7810 | T7806 | compound | ES,cells |
R2319 | T7811 | T7804 | punct | ", ",isolate |
R2320 | T7812 | T7804 | prep | in,isolate |
R2321 | T7813 | T7812 | pobj | concert,in |
R2322 | T7814 | T7813 | prep | with,concert |
R2323 | T7815 | T7816 | det | the,absence |
R2324 | T7816 | T7814 | pobj | absence,with |
R2325 | T7817 | T7816 | prep | of,absence |
R2326 | T7818 | T7819 | nmod | Capn2,embryos |
R2327 | T7819 | T7817 | pobj | embryos,of |
R2328 | T7820 | T7818 | punct | -,Capn2 |
R2329 | T7821 | T7818 | punct | /,Capn2 |
R2330 | T7822 | T7818 | punct | -,Capn2 |
R2331 | T7823 | T7816 | prep | beyond,absence |
R2332 | T7824 | T7825 | det | the,stage |
R2333 | T7825 | T7823 | pobj | stage,beyond |
R2334 | T7826 | T7827 | nummod | 8,cell |
R2335 | T7827 | T7825 | compound | cell,stage |
R2336 | T7828 | T7827 | punct | -,cell |
R2337 | T7829 | T7802 | punct | ", ",suggested |
R2338 | T7830 | T7831 | mark | that,be |
R2339 | T7831 | T7802 | ccomp | be,suggested |
R2340 | T7832 | T7833 | compound | m,calpain |
R2341 | T7833 | T7835 | compound | calpain,activity |
R2342 | T7834 | T7833 | punct | -,calpain |
R2343 | T7835 | T7831 | nsubj | activity,be |
R2344 | T7836 | T7831 | aux | might,be |
R2345 | T7837 | T7831 | acomp | essential,be |
R2346 | T7838 | T7837 | prep | for,essential |
R2347 | T7839 | T7840 | compound | cell,viability |
R2348 | T7840 | T7838 | pobj | viability,for |
R2349 | T7841 | T7840 | cc | or,viability |
R2350 | T7842 | T7843 | det | the,establishment |
R2351 | T7843 | T7840 | conj | establishment,viability |
R2352 | T7844 | T7843 | prep | of,establishment |
R2353 | T7845 | T7846 | amod | viable,clones |
R2354 | T7846 | T7844 | pobj | clones,of |
R2355 | T7847 | T7846 | compound | ES,clones |
R2356 | T7848 | T7846 | compound | cell,clones |
R2357 | T7849 | T7802 | punct | .,suggested |
craft-ca-core-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7655 | 601-608 | CL:0002322 | denotes | ES cell |
T7654 | 484-496 | UBERON:0019252 | denotes | 8-cell stage |
T7653 | 465-472 | UBERON:0000922 | denotes | embryos |
T7652 | 456-461 | PR:000005015 | denotes | Capn2 |
T7651 | 415-423 | CL:0002322 | denotes | ES cells |
T7650 | 406-411 | PR:000005015 | denotes | Capn2 |
T7649 | 358-362 | CHEBI:23888 | denotes | drug |
T7648 | 317-325 | CL:0002322 | denotes | ES cells |
T7647 | 308-313 | PR:000005015 | denotes | Capn2 |
T7646 | 267-275 | CL:0002322 | denotes | ES cells |
T7645 | 258-263 | PR:000005022 | denotes | Capn4 |
T7644 | 209-217 | CL:0002322 | denotes | ES cells |
T7643 | 136-151 | GO:0035822 | denotes | gene conversion |
T7642 | 136-140 | SO:0000704 | denotes | gene |
T7641 | 80-84 | CHEBI:42768 | denotes | G418 |
T7640 | 9-17 | CL:0002322 | denotes | ES cells |
T7639 | 0-5 | PR:000005015 | denotes | Capn2 |
craft-ca-core-ex-dev
Below, discontinuous spans are shown in the chain model. You can change it to the bag model.
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T7703 | 609-615 | SO_EXT:sequence_cloned_entity | denotes | clones |
T7702 | 604-608 | CL_GO_EXT:cell | denotes | cell |
T7701 | 601-608 | CL:0002322 | denotes | ES cell |
T7700 | 555-559 | CL_GO_EXT:cell | denotes | cell |
T7699 | 513-522 | GO_PR_EXT:calpain_2_complex | denotes | m-calpain |
T7698 | 486-490 | CL_GO_EXT:cell | denotes | cell |
T7697 | 484-496 | UBERON:0019252 | denotes | 8-cell stage |
T7696 | 465-472 | UBERON:0000922 | denotes | embryos |
T7695 | 463-464 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T7694 | 461-462 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T7693 | 456-461 | PR_EXT:000005015 | denotes | Capn2 |
T7692 | 418-423 | CL_GO_EXT:cell | denotes | cells |
T7691 | 415-423 | CL:0002322 | denotes | ES cells |
T7690 | 413-414 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T7689 | 411-412 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T7688 | 406-411 | PR_EXT:000005015 | denotes | Capn2 |
T7687 | 373-379 | SO_EXT:sequence_cloned_entity | denotes | clones |
T7686 | 358-362 | CHEBI_EXT:23888 | denotes | drug |
T7685 | 320-325 | CL_GO_EXT:cell | denotes | cells |
T7684 | 317-325 | CL:0002322 | denotes | ES cells |
T7683 | 315-316 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T7682 | 313-314 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T7681 | 308-313 | PR_EXT:000005015 | denotes | Capn2 |
T7680 | 270-275 | CL_GO_EXT:cell | denotes | cells |
T7679 | 267-275 | CL:0002322 | denotes | ES cells |
T7678 | 265-266 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T7677 | 263-264 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
T7676 | 258-263 | PR_EXT:000005022 | denotes | Capn4 |
T7675 | 212-217 | CL_GO_EXT:cell | denotes | cells |
T7674 | 209-217 | CL:0002322 | denotes | ES cells |
T7673 | 136-151 | GO:0035822 | denotes | gene conversion |
T7672 | 136-140 | SO_EXT:0000704 | denotes | gene |
T7671 | 127-132 | CL_GO_EXT:cell | denotes | cells |
T7670 | 120-126 | SO_EXT:sequence_altered_entity_or_alteration_process | denotes | mutant |
T7669 | 80-84 | CHEBI:42768 | denotes | G418 |
T7668 | 36-42 | SO_EXT:sequence_cloned_entity | denotes | clonal |
T7667 | 12-17 | CL_GO_EXT:cell | denotes | cells |
T7666 | 9-17 | CL:0002322 | denotes | ES cells |
T7665 | 7-8 | SO_EXT:sequence_nullness_or_absence | denotes | - |
T7664 | 5-6 | SO_EXT:normal_or_wild_type_or_present | denotes | + |
T7663 | 0-5 | PR_EXT:000005015 | denotes | Capn2 |