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PMC:1382200 / 12101-12308 JSONTXT

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craft-sa-dev

Id Subject Object Predicate Lexical cue
T21933 206-207 . denotes .
T21932 190-199 NN denotes targeting
T21931 200-206 NN denotes vector
T21930 186-189 DT denotes the
T21929 183-185 IN denotes of
T21928 177-178 -RRB- denotes )
T21927 169-177 JJ denotes upstream
T21926 168-169 -LRB- denotes (
T21925 162-167 JJ denotes short
T21924 179-182 NN denotes arm
T21923 158-161 DT denotes the
T21922 155-157 IN denotes of
T21921 149-150 SYM denotes '
T21920 148-149 CD denotes 3
T21919 151-154 NN denotes end
T21918 144-147 DT denotes the
T21917 135-143 VBG denotes spanning
T21916 130-134 DT denotes both
T21915 128-130 , denotes ,
T21914 115-121 NN denotes mutant
T21913 122-128 NN denotes allele
T21912 111-114 DT denotes the
T21911 106-110 IN denotes from
T21910 95-97 NN denotes bp
T21909 91-94 CD denotes 389
T21908 98-105 NN denotes segment
T21907 89-90 DT denotes a
T21906 85-88 CC denotes and
T21905 72-73 HYPH denotes -
T21904 73-77 NN denotes type
T21903 68-72 JJ denotes wild
T21902 78-84 NN denotes allele
T21901 64-67 DT denotes the
T21900 59-63 IN denotes from
T21899 47-49 NN denotes bp
T21898 43-46 CD denotes 429
T21897 50-58 NN denotes fragment
T21896 41-42 DT denotes a
T21895 33-40 VB denotes amplify
T21894 30-32 TO denotes to
T21893 20-24 VBD denotes were
T21892 25-29 VBN denotes used
T21891 10-19 NNS denotes reactions
T21890 1-9 JJ denotes Separate
T21889 0-207 sentence denotes Separate reactions were used to amplify a 429 bp fragment from the wild-type allele and a 389 bp segment from the mutant allele, both spanning the 3' end of the short (upstream) arm of the targeting vector.
R6499 T21890 T21891 amod Separate,reactions
R6500 T21891 T21892 nsubjpass reactions,used
R6501 T21893 T21892 auxpass were,used
R6502 T21894 T21895 aux to,amplify
R6503 T21895 T21892 advcl amplify,used
R6504 T21896 T21897 det a,fragment
R6505 T21897 T21895 dobj fragment,amplify
R6506 T21898 T21899 nummod 429,bp
R6507 T21899 T21897 compound bp,fragment
R6508 T21900 T21897 prep from,fragment
R6509 T21901 T21902 det the,allele
R6510 T21902 T21900 pobj allele,from
R6511 T21903 T21904 amod wild,type
R6512 T21904 T21902 compound type,allele
R6513 T21905 T21904 punct -,type
R6514 T21906 T21897 cc and,fragment
R6515 T21907 T21908 det a,segment
R6516 T21908 T21897 conj segment,fragment
R6517 T21909 T21910 nummod 389,bp
R6518 T21910 T21908 compound bp,segment
R6519 T21911 T21908 prep from,segment
R6520 T21912 T21913 det the,allele
R6521 T21913 T21911 pobj allele,from
R6522 T21914 T21913 compound mutant,allele
R6523 T21915 T21897 punct ", ",fragment
R6524 T21916 T21897 appos both,fragment
R6525 T21917 T21916 acl spanning,both
R6526 T21918 T21919 det the,end
R6527 T21919 T21917 dobj end,spanning
R6528 T21920 T21919 nummod 3,end
R6529 T21921 T21920 punct ',3
R6530 T21922 T21919 prep of,end
R6531 T21923 T21924 det the,arm
R6532 T21924 T21922 pobj arm,of
R6533 T21925 T21924 amod short,arm
R6534 T21926 T21927 punct (,upstream
R6535 T21927 T21924 parataxis upstream,arm
R6536 T21928 T21927 punct ),upstream
R6537 T21929 T21924 prep of,arm
R6538 T21930 T21931 det the,vector
R6539 T21931 T21929 pobj vector,of
R6540 T21932 T21931 compound targeting,vector
R6541 T21933 T21892 punct .,used

craft-ca-core-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21811 190-206 SO:0001644 denotes targeting vector
T21810 122-128 SO:0001023 denotes allele
T21809 95-97 SO:0000028 denotes bp
T21808 78-84 SO:0001023 denotes allele
T21807 47-49 SO:0000028 denotes bp

craft-ca-core-ex-dev

Below, discontinuous spans are shown in the chain model. You can change it to the bag model.

Id Subject Object Predicate Lexical cue
T21834 169-177 SO_EXT:sequence_upstreamness denotes upstream
T21833 122-128 SO_EXT:0001023 denotes allele
T21832 115-121 SO_EXT:sequence_altered_entity_or_alteration_process denotes mutant
T21831 95-97 SO_EXT:0000028 denotes bp
T21830 78-84 SO_EXT:0001023 denotes allele
T21829 68-77 SO_EXT:wild_type_entity_or_quality denotes wild-type
T21828 47-49 SO_EXT:0000028 denotes bp
T21835 190-206 SO_EXT:0001644 denotes targeting vector