PMC:1359074 / 960-1190
Annnotations
pmc-enju-pas
{"project":"pmc-enju-pas","denotations":[{"id":"T435","span":{"begin":225,"end":227},"obj":"IN"},{"id":"T434","span":{"begin":218,"end":224},"obj":"NN"},{"id":"T433","span":{"begin":215,"end":217},"obj":"JJ"},{"id":"T429","span":{"begin":189,"end":197},"obj":"VB"},{"id":"T428","span":{"begin":186,"end":188},"obj":"VB"},{"id":"T427","span":{"begin":181,"end":185},"obj":"NN"},{"id":"T426","span":{"begin":176,"end":180},"obj":"IN"},{"id":"T425","span":{"begin":170,"end":175},"obj":"VB"},{"id":"T424","span":{"begin":164,"end":169},"obj":"NN"},{"id":"T423","span":{"begin":156,"end":163},"obj":"JJ"},{"id":"T422","span":{"begin":152,"end":155},"obj":"DT"},{"id":"T421","span":{"begin":136,"end":150},"obj":"NN"},{"id":"T420","span":{"begin":125,"end":135},"obj":"JJ"},{"id":"T419","span":{"begin":122,"end":124},"obj":"IN"},{"id":"T418","span":{"begin":112,"end":121},"obj":"NN"},{"id":"T417","span":{"begin":107,"end":111},"obj":"NN"},{"id":"T416","span":{"begin":102,"end":106},"obj":"IN"},{"id":"T415","span":{"begin":90,"end":101},"obj":"VB"},{"id":"T414","span":{"begin":84,"end":89},"obj":"NN"},{"id":"T413","span":{"begin":78,"end":83},"obj":"JJ"},{"id":"T412","span":{"begin":67,"end":77},"obj":"JJ"},{"id":"T411","span":{"begin":61,"end":66},"obj":"NN"},{"id":"T410","span":{"begin":58,"end":60},"obj":"IN"},{"id":"T409","span":{"begin":55,"end":57},"obj":"NN"},{"id":"T408","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T407","span":{"begin":41,"end":51},"obj":"NN"},{"id":"T406","span":{"begin":33,"end":40},"obj":"JJ"},{"id":"T405","span":{"begin":29,"end":32},"obj":"DT"},{"id":"T404","span":{"begin":25,"end":28},"obj":"CC"},{"id":"T403","span":{"begin":19,"end":24},"obj":"NN"},{"id":"T402","span":{"begin":13,"end":18},"obj":"JJ"},{"id":"T401","span":{"begin":3,"end":12},"obj":"JJ"},{"id":"T400","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T431","span":{"begin":202,"end":211},"obj":"NN"},{"id":"T430","span":{"begin":198,"end":201},"obj":"IN"},{"id":"T432","span":{"begin":212,"end":214},"obj":"IN"}],"relations":[{"id":"R193","pred":"arg2Of","subj":"T403","obj":"T400"},{"id":"R194","pred":"arg1Of","subj":"T403","obj":"T401"},{"id":"R195","pred":"arg1Of","subj":"T403","obj":"T402"},{"id":"R196","pred":"arg1Of","subj":"T404","obj":"T415"},{"id":"R197","pred":"arg2Of","subj":"T407","obj":"T404"},{"id":"R198","pred":"arg1Of","subj":"T407","obj":"T405"},{"id":"R199","pred":"arg1Of","subj":"T407","obj":"T406"},{"id":"R200","pred":"arg1Of","subj":"T407","obj":"T408"},{"id":"R201","pred":"arg1Of","subj":"T407","obj":"T410"},{"id":"R202","pred":"arg2Of","subj":"T409","obj":"T408"},{"id":"R203","pred":"arg2Of","subj":"T414","obj":"T410"},{"id":"R204","pred":"arg1Of","subj":"T414","obj":"T411"},{"id":"R205","pred":"arg1Of","subj":"T414","obj":"T412"},{"id":"R206","pred":"arg1Of","subj":"T414","obj":"T413"},{"id":"R207","pred":"arg1Of","subj":"T415","obj":"T419"},{"id":"R208","pred":"arg2Of","subj":"T418","obj":"T415"},{"id":"R209","pred":"arg1Of","subj":"T418","obj":"T416"},{"id":"R210","pred":"arg1Of","subj":"T418","obj":"T417"},{"id":"R211","pred":"arg2Of","subj":"T421","obj":"T419"},{"id":"R212","pred":"arg1Of","subj":"T421","obj":"T420"},{"id":"R213","pred":"arg1Of","subj":"T424","obj":"T422"},{"id":"R214","pred":"arg1Of","subj":"T424","obj":"T423"},{"id":"R215","pred":"arg1Of","subj":"T424","obj":"T425"},{"id":"R216","pred":"arg1Of","subj":"T427","obj":"T428"},{"id":"R217","pred":"arg2Of","subj":"T427","obj":"T429"},{"id":"R219","pred":"arg2Of","subj":"T429","obj":"T428"},{"id":"R220","pred":"arg1Of","subj":"T429","obj":"T430"},{"id":"R222","pred":"arg2Of","subj":"T431","obj":"T430"},{"id":"R223","pred":"arg1Of","subj":"T431","obj":"T432"},{"id":"R224","pred":"arg1Of","subj":"T431","obj":"T435"},{"id":"R225","pred":"arg2Of","subj":"T434","obj":"T432"},{"id":"R226","pred":"arg1Of","subj":"T434","obj":"T433"}],"namespaces":[{"prefix":"_base","uri":"http://kmcs.nii.ac.jp/enju/"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T158","span":{"begin":55,"end":57},"obj":"Protein"},{"id":"T159","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T160","span":{"begin":181,"end":185},"obj":"Protein"},{"id":"T161","span":{"begin":215,"end":224},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
bionlp-st-ge-2016-uniprot
{"project":"bionlp-st-ge-2016-uniprot","denotations":[{"id":"T480","span":{"begin":107,"end":111},"obj":"http://www.uniprot.org/uniprot/P35712"},{"id":"T481","span":{"begin":181,"end":185},"obj":"http://www.uniprot.org/uniprot/P35712"}],"namespaces":[{"prefix":"_base","uri":"http://www.uniprot.org/uniprot/"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
UBERON-AE
{"project":"UBERON-AE","denotations":[{"id":"T90","span":{"begin":19,"end":24},"obj":"http://purl.obolibrary.org/obo/UBERON_0002107"},{"id":"T91","span":{"begin":84,"end":89},"obj":"http://purl.obolibrary.org/obo/UBERON_0002107"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T108","span":{"begin":136,"end":150},"obj":"http://purl.obolibrary.org/obo/GO_0030218"},{"id":"T105","span":{"begin":125,"end":150},"obj":"http://purl.obolibrary.org/obo/GO_0060318"},{"id":"T102","span":{"begin":218,"end":224},"obj":"http://purl.obolibrary.org/obo/GO_0005344"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T167","span":{"begin":218,"end":224},"obj":"http://purl.obolibrary.org/obo/GO_0005344"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
simple1
{"project":"simple1","denotations":[{"id":"T246","span":{"begin":215,"end":224},"obj":"Protein"},{"id":"T245","span":{"begin":181,"end":185},"obj":"Protein"},{"id":"T244","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T243","span":{"begin":55,"end":57},"obj":"Protein"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T888","span":{"begin":55,"end":57},"obj":"Protein"},{"id":"T889","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T890","span":{"begin":181,"end":185},"obj":"Protein"},{"id":"T891","span":{"begin":215,"end":224},"obj":"Protein"},{"id":"T900","span":{"begin":41,"end":51},"obj":"Gene_expression"},{"id":"T902","span":{"begin":189,"end":197},"obj":"Positive_regulation"},{"id":"T903","span":{"begin":202,"end":211},"obj":"Negative_regulation"}],"relations":[{"id":"R592","pred":"themeOf","subj":"T888","obj":"T900"},{"id":"R593","pred":"themeOf","subj":"T891","obj":"T903"},{"id":"R596","pred":"themeOf","subj":"T903","obj":"T902"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T496","span":{"begin":55,"end":57},"obj":"Protein"},{"id":"T497","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T498","span":{"begin":181,"end":185},"obj":"Protein"},{"id":"T499","span":{"begin":215,"end":224},"obj":"Protein"},{"id":"T510","span":{"begin":41,"end":51},"obj":"Gene_expression"},{"id":"T512","span":{"begin":202,"end":211},"obj":"Negative_regulation"},{"id":"T513","span":{"begin":189,"end":197},"obj":"Positive_regulation"}],"relations":[{"id":"R453","pred":"themeOf","subj":"T496","obj":"T510"},{"id":"R454","pred":"causeOf","subj":"T498","obj":"T513"},{"id":"R455","pred":"themeOf","subj":"T499","obj":"T512"},{"id":"R460","pred":"themeOf","subj":"T512","obj":"T513"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T543","span":{"begin":189,"end":197},"obj":"Positive_regulation"},{"id":"T542","span":{"begin":202,"end":211},"obj":"Negative_regulation"},{"id":"T541","span":{"begin":33,"end":40},"obj":"Negative_regulation"},{"id":"T540","span":{"begin":41,"end":51},"obj":"Gene_expression"},{"id":"T527","span":{"begin":55,"end":57},"obj":"Protein"},{"id":"T528","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T529","span":{"begin":181,"end":185},"obj":"Protein"},{"id":"T530","span":{"begin":215,"end":224},"obj":"Protein"}],"relations":[{"id":"R265","pred":"themeOf","subj":"T540","obj":"T541"},{"id":"R266","pred":"themeOf","subj":"T542","obj":"T543"},{"id":"R468","pred":"themeOf","subj":"T527","obj":"T540"},{"id":"R469","pred":"causeOf","subj":"T529","obj":"T543"},{"id":"R470","pred":"themeOf","subj":"T530","obj":"T542"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T869","span":{"begin":29,"end":66},"obj":"Gene_expression"},{"id":"T845","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T842","span":{"begin":181,"end":185},"obj":"Protein"},{"id":"T849","span":{"begin":52,"end":57},"obj":"Protein"},{"id":"T854","span":{"begin":61,"end":66},"obj":"Entity"},{"id":"T857","span":{"begin":212,"end":224},"obj":"Protein"}],"relations":[{"id":"R578","pred":"themeOf","subj":"T849","obj":"T869"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T729","span":{"begin":0,"end":2},"obj":"IN"},{"id":"T730","span":{"begin":3,"end":12},"obj":"JJ"},{"id":"T731","span":{"begin":13,"end":18},"obj":"JJ"},{"id":"T732","span":{"begin":19,"end":24},"obj":"NN"},{"id":"T733","span":{"begin":25,"end":28},"obj":"CC"},{"id":"T734","span":{"begin":29,"end":32},"obj":"DT"},{"id":"T735","span":{"begin":33,"end":40},"obj":"JJ"},{"id":"T736","span":{"begin":41,"end":51},"obj":"NN"},{"id":"T737","span":{"begin":52,"end":54},"obj":"IN"},{"id":"T738","span":{"begin":55,"end":57},"obj":"NN"},{"id":"T739","span":{"begin":58,"end":60},"obj":"IN"},{"id":"T740","span":{"begin":61,"end":66},"obj":"JJ"},{"id":"T741","span":{"begin":67,"end":77},"obj":"JJ"},{"id":"T742","span":{"begin":78,"end":83},"obj":"JJ"},{"id":"T743","span":{"begin":84,"end":89},"obj":"NN"},{"id":"T744","span":{"begin":90,"end":101},"obj":"VBP"},{"id":"T745","span":{"begin":102,"end":106},"obj":"IN"},{"id":"T746","span":{"begin":107,"end":111},"obj":"JJ"},{"id":"T747","span":{"begin":112,"end":121},"obj":"NNS"},{"id":"T748","span":{"begin":122,"end":124},"obj":"IN"},{"id":"T749","span":{"begin":125,"end":135},"obj":"JJ"},{"id":"T750","span":{"begin":136,"end":150},"obj":"NNS"},{"id":"T751","span":{"begin":150,"end":151},"obj":"."},{"id":"T752","span":{"begin":152,"end":155},"obj":"DT"},{"id":"T753","span":{"begin":156,"end":163},"obj":"JJ"},{"id":"T754","span":{"begin":164,"end":169},"obj":"NN"},{"id":"T755","span":{"begin":170,"end":175},"obj":"VBZ"},{"id":"T756","span":{"begin":176,"end":180},"obj":"IN"},{"id":"T757","span":{"begin":181,"end":185},"obj":"NNP"},{"id":"T758","span":{"begin":186,"end":188},"obj":"VBZ"},{"id":"T759","span":{"begin":189,"end":197},"obj":"VBN"},{"id":"T760","span":{"begin":198,"end":201},"obj":"IN"},{"id":"T761","span":{"begin":202,"end":211},"obj":"VBG"},{"id":"T762","span":{"begin":212,"end":214},"obj":"IN"},{"id":"T763","span":{"begin":215,"end":217},"obj":"JJ"},{"id":"T764","span":{"begin":218,"end":224},"obj":"NN"},{"id":"T765","span":{"begin":225,"end":227},"obj":"IN"}],"relations":[{"id":"R498","pred":"amod","subj":"T730","obj":"T732"},{"id":"R499","pred":"amod","subj":"T731","obj":"T732"},{"id":"R500","pred":"pobj","subj":"T732","obj":"T729"},{"id":"R501","pred":"cc","subj":"T733","obj":"T732"},{"id":"R502","pred":"det","subj":"T734","obj":"T736"},{"id":"R503","pred":"amod","subj":"T735","obj":"T736"},{"id":"R504","pred":"conj","subj":"T736","obj":"T732"},{"id":"R505","pred":"prep","subj":"T737","obj":"T736"},{"id":"R506","pred":"pobj","subj":"T738","obj":"T737"},{"id":"R507","pred":"prep","subj":"T739","obj":"T738"},{"id":"R508","pred":"amod","subj":"T740","obj":"T743"},{"id":"R509","pred":"amod","subj":"T741","obj":"T743"},{"id":"R510","pred":"amod","subj":"T742","obj":"T743"},{"id":"R511","pred":"pobj","subj":"T743","obj":"T739"},{"id":"R512","pred":"ROOT","subj":"T744","obj":"T744"},{"id":"R513","pred":"dobj","subj":"T745","obj":"T744"},{"id":"R514","pred":"amod","subj":"T746","obj":"T747"},{"id":"R515","pred":"conj","subj":"T747","obj":"T745"},{"id":"R516","pred":"prep","subj":"T748","obj":"T747"},{"id":"R517","pred":"amod","subj":"T749","obj":"T750"},{"id":"R518","pred":"pobj","subj":"T750","obj":"T748"},{"id":"R519","pred":"punct","subj":"T751","obj":"T744"},{"id":"R520","pred":"det","subj":"T752","obj":"T754"},{"id":"R521","pred":"amod","subj":"T753","obj":"T754"},{"id":"R522","pred":"nsubj","subj":"T754","obj":"T755"},{"id":"R523","pred":"ROOT","subj":"T755","obj":"T755"},{"id":"R524","pred":"mark","subj":"T756","obj":"T759"},{"id":"R525","pred":"nsubjpass","subj":"T757","obj":"T759"},{"id":"R526","pred":"auxpass","subj":"T758","obj":"T759"},{"id":"R527","pred":"ccomp","subj":"T759","obj":"T755"},{"id":"R528","pred":"prep","subj":"T760","obj":"T759"},{"id":"R529","pred":"pcomp","subj":"T761","obj":"T760"},{"id":"R530","pred":"prep","subj":"T762","obj":"T761"},{"id":"R531","pred":"amod","subj":"T763","obj":"T764"},{"id":"R532","pred":"pobj","subj":"T764","obj":"T762"},{"id":"R533","pred":"prep","subj":"T765","obj":"T761"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T227","span":{"begin":189,"end":197},"obj":"Positive_regulation"},{"id":"T224","span":{"begin":218,"end":224},"obj":"Protein"},{"id":"T223","span":{"begin":181,"end":185},"obj":"Protein"},{"id":"T221","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T220","span":{"begin":61,"end":66},"obj":"Protein"},{"id":"T226","span":{"begin":202,"end":211},"obj":"Negative_regulation"}],"relations":[{"id":"R39","pred":"causeOf","subj":"T223","obj":"T227"},{"id":"R40","pred":"themeOf","subj":"T224","obj":"T226"},{"id":"R445","pred":"themeOf","subj":"T226","obj":"T227"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
testone
{"project":"testone","denotations":[{"id":"T32","span":{"begin":55,"end":57},"obj":"Protein"},{"id":"T33","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T34","span":{"begin":181,"end":185},"obj":"Protein"},{"id":"T35","span":{"begin":215,"end":224},"obj":"Protein"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}
test3
{"project":"test3","denotations":[{"id":"T82","span":{"begin":215,"end":224},"obj":"Protein"},{"id":"T57","span":{"begin":55,"end":57},"obj":"Protein"},{"id":"T58","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T59","span":{"begin":181,"end":185},"obj":"Protein"},{"id":"T60","span":{"begin":215,"end":224},"obj":"Protein"},{"id":"T79","span":{"begin":55,"end":57},"obj":"Protein"},{"id":"T80","span":{"begin":107,"end":111},"obj":"Protein"},{"id":"T81","span":{"begin":181,"end":185},"obj":"Protein"}],"relations":[{"id":"R16","pred":"themeOf","subj":"T82","obj":"T81"}],"text":"in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis. The present study shows that Sox6 is required for silencing of ɛy globin in de"}