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PMC:1359074 / 930-1111 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T421 166-180 NN denotes erythropoiesis
T420 155-165 JJ denotes definitive
T419 152-154 IN denotes in
T418 142-151 NN denotes functions
T417 137-141 NN denotes Sox6
T416 132-136 IN denotes that
T415 120-131 VB denotes demonstrate
T414 114-119 NN denotes liver
T413 108-113 JJ denotes fetal
T412 97-107 JJ denotes homozygous
T411 91-96 NN denotes p100H
T410 88-90 IN denotes in
T409 85-87 NN denotes ɛy
T408 82-84 IN denotes of
T407 71-81 NN denotes expression
T406 63-70 JJ denotes ectopic
T405 59-62 DT denotes the
T404 55-58 CC denotes and
T403 49-54 NN denotes liver
T402 43-48 JJ denotes fetal
T401 33-42 JJ denotes wild-type
T400 30-32 IN denotes in
T399 25-29 NN denotes Sox6
T398 22-24 IN denotes of
T397 11-21 NN denotes expression
T396 4-10 JJ denotes normal
T395 0-3 DT denotes The
R187 T397 T395 arg1Of expression,The
R188 T397 T396 arg1Of expression,normal
R189 T397 T398 arg1Of expression,of
R190 T397 T400 arg1Of expression,in
R191 T397 T404 arg1Of expression,and
R192 T399 T398 arg2Of Sox6,of
R193 T403 T400 arg2Of liver,in
R194 T403 T401 arg1Of liver,wild-type
R195 T403 T402 arg1Of liver,fetal
R196 T404 T415 arg1Of and,demonstrate
R197 T407 T404 arg2Of expression,and
R198 T407 T405 arg1Of expression,the
R199 T407 T406 arg1Of expression,ectopic
R200 T407 T408 arg1Of expression,of
R201 T407 T410 arg1Of expression,in
R202 T409 T408 arg2Of ɛy,of
R203 T414 T410 arg2Of liver,in
R204 T414 T411 arg1Of liver,p100H
R205 T414 T412 arg1Of liver,homozygous
R206 T414 T413 arg1Of liver,fetal
R207 T415 T419 arg1Of demonstrate,in
R208 T418 T415 arg2Of functions,demonstrate
R209 T418 T416 arg1Of functions,that
R210 T418 T417 arg1Of functions,Sox6
R211 T421 T419 arg2Of erythropoiesis,in
R212 T421 T420 arg1Of erythropoiesis,definitive

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T157 25-29 Protein denotes Sox6
T158 85-87 Protein denotes ɛy
T159 137-141 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T479 25-29 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T480 137-141 http://www.uniprot.org/uniprot/P35712 denotes Sox6

UBERON-AE

Id Subject Object Predicate Lexical cue
T90 49-54 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver
T91 114-119 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver

GO-BP

Id Subject Object Predicate Lexical cue
T108 166-180 http://purl.obolibrary.org/obo/GO_0030218 denotes erythropoiesis
T105 155-180 http://purl.obolibrary.org/obo/GO_0060318 denotes definitive erythropoiesis

sentences

Id Subject Object Predicate Lexical cue
T97 0-181 Sentence denotes The normal expression of Sox6 in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis.
T9 0-181 Sentence denotes The normal expression of Sox6 in wild-type fetal liver and the ectopic expression of ɛy in p100H homozygous fetal liver demonstrate that Sox6 functions in definitive erythropoiesis.

simple1

Id Subject Object Predicate Lexical cue
T244 137-141 Protein denotes Sox6
T243 85-87 Protein denotes ɛy
T242 25-29 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T887 25-29 Protein denotes Sox6
T888 85-87 Protein denotes ɛy
T889 137-141 Protein denotes Sox6
T900 71-81 Gene_expression denotes expression
T901 11-21 Gene_expression denotes expression
R591 T887 T901 themeOf Sox6,expression
R592 T888 T900 themeOf ɛy,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T495 25-29 Protein denotes Sox6
T496 85-87 Protein denotes ɛy
T497 137-141 Protein denotes Sox6
T510 71-81 Gene_expression denotes expression
T511 11-21 Gene_expression denotes expression
R452 T495 T511 themeOf Sox6,expression
R453 T496 T510 themeOf ɛy,expression

DLUT931

Id Subject Object Predicate Lexical cue
T541 63-70 Negative_regulation denotes ectopic
T540 71-81 Gene_expression denotes expression
T539 11-21 Gene_expression denotes expression
T526 25-29 Protein denotes Sox6
T527 85-87 Protein denotes ɛy
T528 137-141 Protein denotes Sox6
R265 T540 T541 themeOf expression,ectopic
R467 T526 T539 themeOf Sox6,expression
R468 T527 T540 themeOf ɛy,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T872 0-96 Gene_expression denotes The normal expression of Sox6 in wild-type fetal liver and the ectopic expression of ɛy in p100H
T869 59-96 Gene_expression denotes the ectopic expression of ɛy in p100H
T845 137-141 Protein denotes Sox6
T849 82-87 Protein denotes of ɛy
T852 22-29 Protein denotes of Sox6
T854 91-96 Entity denotes p100H
R578 T849 T869 themeOf of ɛy,the ectopic expression of ɛy in p100H
R579 T852 T872 themeOf of Sox6,The normal expression of Sox6 in wild-type fetal liver and the ectopic expression of ɛy in p100H

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T724 0-3 DT denotes The
T725 4-10 JJ denotes normal
T726 11-21 NN denotes expression
T727 22-24 IN denotes of
T728 25-29 NNP denotes Sox6
T729 30-32 IN denotes in
T730 33-42 JJ denotes wild-type
T731 43-48 JJ denotes fetal
T732 49-54 NN denotes liver
T733 55-58 CC denotes and
T734 59-62 DT denotes the
T735 63-70 JJ denotes ectopic
T736 71-81 NN denotes expression
T737 82-84 IN denotes of
T738 85-87 NN denotes ɛy
T739 88-90 IN denotes in
T740 91-96 JJ denotes p100H
T741 97-107 JJ denotes homozygous
T742 108-113 JJ denotes fetal
T743 114-119 NN denotes liver
T744 120-131 VBP denotes demonstrate
T745 132-136 IN denotes that
T746 137-141 JJ denotes Sox6
T747 142-151 NNS denotes functions
T748 152-154 IN denotes in
T749 155-165 JJ denotes definitive
T750 166-180 NNS denotes erythropoiesis
T751 180-181 . denotes .
R492 T724 T726 det The,expression
R493 T725 T726 amod normal,expression
R494 T726 T744 nsubj expression,demonstrate
R495 T727 T726 prep of,expression
R496 T728 T727 pobj Sox6,of
R497 T729 T726 prep in,expression
R498 T730 T732 amod wild-type,liver
R499 T731 T732 amod fetal,liver
R500 T732 T729 pobj liver,in
R501 T733 T732 cc and,liver
R502 T734 T736 det the,expression
R503 T735 T736 amod ectopic,expression
R504 T736 T732 conj expression,liver
R505 T737 T736 prep of,expression
R506 T738 T737 pobj ɛy,of
R507 T739 T738 prep in,ɛy
R508 T740 T743 amod p100H,liver
R509 T741 T743 amod homozygous,liver
R510 T742 T743 amod fetal,liver
R511 T743 T739 pobj liver,in
R512 T744 T744 ROOT demonstrate,demonstrate
R513 T745 T744 dobj that,demonstrate
R514 T746 T747 amod Sox6,functions
R515 T747 T745 conj functions,that
R516 T748 T747 prep in,functions
R517 T749 T750 amod definitive,erythropoiesis
R518 T750 T748 pobj erythropoiesis,in
R519 T751 T744 punct .,demonstrate

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T222 11-21 Gene_expression denotes expression
T221 137-141 Protein denotes Sox6
T220 91-96 Protein denotes p100H
T219 25-29 Protein denotes Sox6
R38 T219 T222 themeOf Sox6,expression

testone

Id Subject Object Predicate Lexical cue
T31 25-29 Protein denotes Sox6
T32 85-87 Protein denotes ɛy
T33 137-141 Protein denotes Sox6

test3

Id Subject Object Predicate Lexical cue
T56 25-29 Protein denotes Sox6
T57 85-87 Protein denotes ɛy
T58 137-141 Protein denotes Sox6
T78 25-29 Protein denotes Sox6
T79 85-87 Protein denotes ɛy
T80 137-141 Protein denotes Sox6