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PMC:1359074 / 9261-9490 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4712 227-228 -RRB- denotes )
T4711 226-227 CD denotes 1
T4710 219-225 NN denotes Figure
T4709 218-219 -LRB- denotes (
T4708 214-217 NN denotes dpc
T4707 209-213 CD denotes 18.5
T4706 206-208 IN denotes at
T4705 199-205 NN denotes globin
T4704 196-198 JJ denotes ɛy
T4703 192-195 IN denotes for
T4702 187-191 VB denotes seen
T4701 182-186 IN denotes than
T4700 175-181 NN denotes extent
T4699 168-174 JJ denotes lesser
T4698 163-167 RB denotes much
T4697 161-162 DT denotes a
T4696 158-160 TO denotes to
T4695 154-157 CC denotes but
T4694 152-153 -COMMA- denotes ,
T4693 148-152 NN denotes mice
T4692 145-147 JJ denotes WT
T4691 140-144 IN denotes with
T4690 131-139 VB denotes compared
T4689 129-130 -COMMA- denotes ,
T4688 125-129 NN denotes mice
T4687 114-124 JJ denotes homozygous
T4686 108-113 NN denotes p100H
T4685 105-107 IN denotes in
T4684 98-104 JJ denotes higher
T4683 93-97 RB denotes also
T4682 89-92 VB denotes are
T4681 87-88 -RRB- denotes )
T4680 84-87 NN denotes βh1
T4679 80-83 CC denotes and
T4678 78-79 NN denotes ζ
T4677 77-78 -LRB- denotes (
T4676 71-76 NN denotes genes
T4675 64-70 NN denotes globin
T4674 54-63 JJ denotes embryonic
T4673 50-53 CD denotes two
T4672 44-49 JJ denotes other
T4671 40-43 DT denotes the
T4670 37-39 IN denotes of
T4669 30-36 NN denotes levels
T4668 19-29 NN denotes expression
T4667 15-18 DT denotes the
T4666 13-14 -COMMA- denotes ,
T4665 0-13 RB denotes Interestingly
R3237 T4669 T4667 arg1Of levels,the
R3238 T4669 T4668 arg1Of levels,expression
R3239 T4669 T4670 arg1Of levels,of
R3240 T4669 T4682 arg1Of levels,are
R3241 T4669 T4684 arg1Of levels,higher
R3242 T4676 T4670 arg2Of genes,of
R3243 T4676 T4671 arg1Of genes,the
R3244 T4676 T4672 arg1Of genes,other
R3245 T4676 T4673 arg1Of genes,two
R3246 T4676 T4674 arg1Of genes,embryonic
R3247 T4676 T4675 arg1Of genes,globin
R3248 T4676 T4677 arg1Of genes,(
R3249 T4678 T4679 arg1Of ζ,and
R3250 T4679 T4677 arg2Of and,(
R3251 T4680 T4679 arg2Of βh1,and
R3252 T4681 T4677 arg3Of ),(
R3253 T4682 T4665 arg1Of are,Interestingly
R3254 T4682 T4666 arg1Of are,","
R3255 T4682 T4683 arg1Of are,also
R3256 T4682 T4689 arg1Of are,","
R3257 T4682 T4690 arg1Of are,compared
R3258 T4684 T4682 arg2Of higher,are
R3259 T4684 T4685 arg1Of higher,in
R3260 T4688 T4685 arg2Of mice,in
R3261 T4688 T4686 arg1Of mice,p100H
R3262 T4688 T4687 arg1Of mice,homozygous
R3263 T4691 T4695 arg1Of with,but
R3264 T4693 T4691 arg2Of mice,with
R3265 T4693 T4692 arg1Of mice,WT
R3266 T4695 T4690 arg2Of but,compared
R3267 T4695 T4694 arg1Of but,","
R3268 T4696 T4695 arg2Of to,but
R3269 T4699 T4698 arg1Of lesser,much
R3270 T4700 T4696 arg2Of extent,to
R3271 T4700 T4697 arg1Of extent,a
R3272 T4700 T4699 arg1Of extent,lesser
R3273 T4700 T4701 arg1Of extent,than
R3274 T4702 T4701 arg2Of seen,than
R3275 T4702 T4703 arg1Of seen,for
R3276 T4702 T4706 arg1Of seen,at
R3277 T4705 T4703 arg2Of globin,for
R3278 T4705 T4704 arg1Of globin,ɛy
R3279 T4708 T4706 arg2Of dpc,at
R3280 T4708 T4707 arg1Of dpc,18.5
R3281 T4708 T4709 arg1Of dpc,(
R3282 T4710 T4709 arg2Of Figure,(
R3283 T4710 T4711 arg1Of Figure,1
R3284 T4712 T4709 arg3Of ),(

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4482 196-205 Protein denotes ɛy globin
T4481 84-87 Protein denotes βh1
T4480 78-79 Protein denotes ζ

GO-BP

Id Subject Object Predicate Lexical cue
T4443 199-205 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4442 64-70 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-MF

Id Subject Object Predicate Lexical cue
T4491 199-205 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4490 64-70 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

sentences

Id Subject Object Predicate Lexical cue
T4433 0-229 Sentence denotes Interestingly, the expression levels of the other two embryonic globin genes (ζ and βh1) are also higher in p100H homozygous mice, compared with WT mice, but to a much lesser extent than seen for ɛy globin at 18.5 dpc (Figure 1).
T62 0-229 Sentence denotes Interestingly, the expression levels of the other two embryonic globin genes (ζ and βh1) are also higher in p100H homozygous mice, compared with WT mice, but to a much lesser extent than seen for ɛy globin at 18.5 dpc (Figure 1).

simple1

Id Subject Object Predicate Lexical cue
T4522 196-205 Protein denotes ɛy globin
T4521 84-87 Protein denotes βh1
T4520 78-79 Protein denotes ζ

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T5421 98-104 Positive_regulation denotes higher
T5420 19-29 Gene_expression denotes expression
T5410 84-87 Protein denotes βh1
T5409 78-79 Protein denotes ζ
T5408 196-205 Protein denotes ɛy globin
R3876 T5409 T5421 themeOf ζ,higher
R3877 T5409 T5420 themeOf ζ,expression
R3878 T5410 T5421 themeOf βh1,higher
R3879 T5410 T5420 themeOf βh1,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4898 19-29 Gene_expression denotes expression
T4888 84-87 Protein denotes βh1
T4887 78-79 Protein denotes ζ
T4886 196-205 Protein denotes ɛy globin
R3457 T4887 T4898 themeOf ζ,expression
R3458 T4888 T4898 themeOf βh1,expression

DLUT931

Id Subject Object Predicate Lexical cue
T4937 98-104 Positive_regulation denotes higher
T4936 19-29 Gene_expression denotes expression
T4925 84-87 Protein denotes βh1
T4924 78-79 Protein denotes ζ
T4923 196-205 Protein denotes ɛy globin
R3469 T4924 T4936 themeOf ζ,expression
R3470 T4924 T4937 themeOf ζ,higher
R3471 T4925 T4936 themeOf βh1,expression
R3472 T4925 T4937 themeOf βh1,higher
R3479 T4936 T4937 themeOf expression,higher
R3480 T4936 T4937 themeOf expression,higher

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T5390 140-152 Protein denotes with WT mice
T5379 84-87 Protein denotes βh1
T5377 209-228 Entity denotes 18.5 dpc (Figure 1)
T5376 108-153 Protein denotes p100H homozygous mice, compared with WT mice,
T5356 40-88 Protein denotes the other two embryonic globin genes (ζ and βh1)
T5354 54-63 Protein denotes embryonic
T5352 78-79 Protein denotes ζ
T5351 40-88 Protein denotes the other two embryonic globin genes (ζ and βh1)
T5350 196-205 Protein denotes ɛy globin

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5155 228-229 . denotes .
T5154 227-228 -RRB- denotes )
T5153 226-227 CD denotes 1
T5152 219-225 NN denotes Figure
T5151 218-219 -LRB- denotes (
T5150 214-217 NN denotes dpc
T5149 209-213 CD denotes 18.5
T5148 206-208 IN denotes at
T5147 199-205 NN denotes globin
T5146 196-198 JJ denotes ɛy
T5145 192-195 IN denotes for
T5144 187-191 VBN denotes seen
T5143 182-186 IN denotes than
T5142 175-181 NN denotes extent
T5141 168-174 JJR denotes lesser
T5140 163-167 JJ denotes much
T5139 161-162 DT denotes a
T5138 158-160 TO denotes to
T5137 154-157 CC denotes but
T5136 152-153 , denotes ,
T5135 148-152 NNS denotes mice
T5134 145-147 NNP denotes WT
T5133 140-144 IN denotes with
T5132 131-139 VBN denotes compared
T5131 129-130 , denotes ,
T5130 125-129 NNS denotes mice
T5129 114-124 JJ denotes homozygous
T5128 108-113 JJ denotes p100H
T5127 105-107 IN denotes in
T5126 98-104 JJR denotes higher
T5125 93-97 RB denotes also
T5124 89-92 VBP denotes are
T5123 87-88 -RRB- denotes )
T5122 84-87 CD denotes βh1
T5121 80-83 CC denotes and
T5120 78-79 NN denotes ζ
T5119 77-78 -LRB- denotes (
T5118 71-76 NNS denotes genes
T5117 64-70 NN denotes globin
T5116 54-63 JJ denotes embryonic
T5115 50-53 CD denotes two
T5114 44-49 JJ denotes other
T5113 40-43 DT denotes the
T5112 37-39 IN denotes of
T5111 30-36 NNS denotes levels
T5110 19-29 NN denotes expression
T5109 15-18 DT denotes the
T5108 13-14 , denotes ,
T5107 0-13 RB denotes Interestingly
R3638 T5107 T5124 advmod Interestingly,are
R3639 T5108 T5124 punct ",",are
R3640 T5109 T5111 det the,levels
R3641 T5110 T5111 compound expression,levels
R3642 T5111 T5124 nsubj levels,are
R3643 T5112 T5111 prep of,levels
R3644 T5113 T5118 det the,genes
R3645 T5114 T5118 amod other,genes
R3646 T5115 T5118 nummod two,genes
R3647 T5116 T5118 amod embryonic,genes
R3648 T5117 T5118 compound globin,genes
R3649 T5118 T5112 pobj genes,of
R3650 T5119 T5118 punct (,genes
R3651 T5120 T5118 appos ζ,genes
R3652 T5121 T5120 cc and,ζ
R3653 T5122 T5120 conj βh1,ζ
R3654 T5123 T5118 punct ),genes
R3655 T5124 T5124 ROOT are,are
R3656 T5125 T5124 advmod also,are
R3657 T5126 T5124 acomp higher,are
R3658 T5127 T5126 prep in,higher
R3659 T5128 T5130 amod p100H,mice
R3660 T5129 T5130 amod homozygous,mice
R3661 T5130 T5127 pobj mice,in
R3662 T5131 T5124 punct ",",are
R3663 T5132 T5124 prep compared,are
R3664 T5133 T5132 prep with,compared
R3665 T5134 T5135 compound WT,mice
R3666 T5135 T5133 pobj mice,with
R3667 T5136 T5124 punct ",",are
R3668 T5137 T5124 cc but,are
R3669 T5138 T5144 prep to,seen
R3670 T5139 T5142 det a,extent
R3671 T5140 T5141 advmod much,lesser
R3672 T5141 T5142 amod lesser,extent
R3673 T5142 T5138 pobj extent,to
R3674 T5143 T5144 mark than,seen
R3675 T5144 T5124 conj seen,are
R3676 T5145 T5144 prep for,seen
R3677 T5146 T5147 amod ɛy,globin
R3678 T5147 T5145 pobj globin,for
R3679 T5148 T5144 prep at,seen
R3680 T5149 T5150 nummod 18.5,dpc
R3681 T5150 T5148 pobj dpc,at
R3682 T5151 T5152 punct (,Figure
R3683 T5152 T5144 conj Figure,seen
R3684 T5153 T5152 nummod 1,Figure
R3685 T5154 T5152 punct ),Figure
R3686 T5155 T5124 punct .,are

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T4506 196-205 Protein denotes ɛy globin

testone

Id Subject Object Predicate Lexical cue
T4387 19-29 Gene_expression denotes expression
T4377 196-205 Protein denotes ɛy globin
T4376 84-87 Protein denotes βh1
T4375 78-79 Protein denotes ζ
R3067 T4375 T4387 themeOf ζ,expression
R3068 T4376 T4387 themeOf βh1,expression

test3

Id Subject Object Predicate Lexical cue
T4415 196-205 Protein denotes ɛy globin
T4414 84-87 Protein denotes βh1
T4413 78-79 Protein denotes ζ
T4400 196-205 Protein denotes ɛy globin
T4399 84-87 Protein denotes βh1
T4398 78-79 Protein denotes ζ