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PMC:1359074 / 9057-9426 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4697 365-366 DT denotes a
T4696 362-364 TO denotes to
T4695 358-361 CC denotes but
T4694 356-357 -COMMA- denotes ,
T4693 352-356 NN denotes mice
T4692 349-351 JJ denotes WT
T4691 344-348 IN denotes with
T4690 335-343 VB denotes compared
T4689 333-334 -COMMA- denotes ,
T4688 329-333 NN denotes mice
T4687 318-328 JJ denotes homozygous
T4686 312-317 NN denotes p100H
T4685 309-311 IN denotes in
T4684 302-308 JJ denotes higher
T4683 297-301 RB denotes also
T4682 293-296 VB denotes are
T4681 291-292 -RRB- denotes )
T4680 288-291 NN denotes βh1
T4679 284-287 CC denotes and
T4678 282-283 NN denotes ζ
T4677 281-282 -LRB- denotes (
T4676 275-280 NN denotes genes
T4675 268-274 NN denotes globin
T4674 258-267 JJ denotes embryonic
T4673 254-257 CD denotes two
T4672 248-253 JJ denotes other
T4671 244-247 DT denotes the
T4670 241-243 IN denotes of
T4669 234-240 NN denotes levels
T4668 223-233 NN denotes expression
T4667 219-222 DT denotes the
T4666 217-218 -COMMA- denotes ,
T4665 204-217 RB denotes Interestingly
T4664 201-202 -RRB- denotes )
T4663 197-201 NN denotes data
T4662 185-196 JJ denotes unpublished
T4661 184-185 -LRB- denotes (
T4660 179-183 NN denotes mice
T4659 166-178 JJ denotes heterozygous
T4658 162-165 CC denotes and
T4657 159-161 NN denotes WT
T4656 151-158 IN denotes between
T4655 146-150 VB denotes seen
T4654 142-145 VB denotes was
T4653 131-141 NN denotes difference
T4652 128-130 DT denotes No
T4651 122-126 NN denotes mice
T4650 119-121 JJ denotes WT
T4649 116-118 IN denotes in
T4648 107-115 VB denotes observed
T4647 96-106 NN denotes expression
T4646 93-95 IN denotes in
T4645 85-92 NN denotes decline
T4644 81-84 DT denotes the
T4643 78-80 TO denotes to
T4642 69-77 NN denotes contrast
T4641 66-68 IN denotes in
T4640 64-65 -COMMA- denotes ,
T4639 60-64 NN denotes mice
T4638 53-59 JJ denotes mutant
T4637 50-52 IN denotes in
T4636 43-49 NN denotes points
T4635 38-42 NN denotes time
T4634 33-37 DT denotes both
T4633 30-32 IN denotes at
T4632 23-29 NN denotes levels
T4631 18-22 JJ denotes high
T4630 15-17 IN denotes at
T4629 5-14 VB denotes expressed
T4628 2-4 VB denotes is
R3200 T4629 T4628 arg2Of expressed,is
R3201 T4629 T4630 arg1Of expressed,at
R3202 T4629 T4633 arg1Of expressed,at
R3203 T4629 T4637 arg1Of expressed,in
R3204 T4629 T4640 arg1Of expressed,","
R3205 T4629 T4641 arg1Of expressed,in
R3206 T4632 T4630 arg2Of levels,at
R3207 T4632 T4631 arg1Of levels,high
R3208 T4636 T4633 arg2Of points,at
R3209 T4636 T4634 arg1Of points,both
R3210 T4636 T4635 arg1Of points,time
R3211 T4639 T4637 arg2Of mice,in
R3212 T4639 T4638 arg1Of mice,mutant
R3213 T4641 T4643 arg1Of in,to
R3214 T4642 T4641 arg2Of contrast,in
R3215 T4645 T4641 arg3Of decline,in
R3216 T4645 T4644 arg1Of decline,the
R3217 T4645 T4646 arg1Of decline,in
R3218 T4647 T4646 arg2Of expression,in
R3219 T4647 T4648 arg2Of expression,observed
R3220 T4648 T4649 arg1Of observed,in
R3221 T4651 T4649 arg2Of mice,in
R3222 T4651 T4650 arg1Of mice,WT
R3223 T4653 T4652 arg1Of difference,No
R3224 T4653 T4654 arg1Of difference,was
R3225 T4653 T4655 arg2Of difference,seen
R3226 T4655 T4654 arg2Of seen,was
R3227 T4655 T4656 arg1Of seen,between
R3228 T4657 T4658 arg1Of WT,and
R3229 T4659 T4658 arg2Of heterozygous,and
R3230 T4660 T4656 arg2Of mice,between
R3231 T4660 T4657 arg1Of mice,WT
R3232 T4660 T4659 arg1Of mice,heterozygous
R3233 T4660 T4661 arg1Of mice,(
R3234 T4663 T4661 arg2Of data,(
R3235 T4663 T4662 arg1Of data,unpublished
R3236 T4664 T4661 arg3Of ),(
R3237 T4669 T4667 arg1Of levels,the
R3238 T4669 T4668 arg1Of levels,expression
R3239 T4669 T4670 arg1Of levels,of
R3240 T4669 T4682 arg1Of levels,are
R3241 T4669 T4684 arg1Of levels,higher
R3242 T4676 T4670 arg2Of genes,of
R3243 T4676 T4671 arg1Of genes,the
R3244 T4676 T4672 arg1Of genes,other
R3245 T4676 T4673 arg1Of genes,two
R3246 T4676 T4674 arg1Of genes,embryonic
R3247 T4676 T4675 arg1Of genes,globin
R3248 T4676 T4677 arg1Of genes,(
R3249 T4678 T4679 arg1Of ζ,and
R3250 T4679 T4677 arg2Of and,(
R3251 T4680 T4679 arg2Of βh1,and
R3252 T4681 T4677 arg3Of ),(
R3253 T4682 T4665 arg1Of are,Interestingly
R3254 T4682 T4666 arg1Of are,","
R3255 T4682 T4683 arg1Of are,also
R3256 T4682 T4689 arg1Of are,","
R3257 T4682 T4690 arg1Of are,compared
R3258 T4684 T4682 arg2Of higher,are
R3259 T4684 T4685 arg1Of higher,in
R3260 T4688 T4685 arg2Of mice,in
R3261 T4688 T4686 arg1Of mice,p100H
R3262 T4688 T4687 arg1Of mice,homozygous
R3263 T4691 T4695 arg1Of with,but
R3264 T4693 T4691 arg2Of mice,with
R3265 T4693 T4692 arg1Of mice,WT
R3266 T4695 T4690 arg2Of but,compared
R3267 T4695 T4694 arg1Of but,","
R3268 T4696 T4695 arg2Of to,but

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4481 288-291 Protein denotes βh1
T4480 282-283 Protein denotes ζ

GO-BP

Id Subject Object Predicate Lexical cue
T4442 268-274 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-MF

Id Subject Object Predicate Lexical cue
T4490 268-274 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

sentences

Id Subject Object Predicate Lexical cue
T4432 128-203 Sentence denotes No difference was seen between WT and heterozygous mice (unpublished data).
T61 128-203 Sentence denotes No difference was seen between WT and heterozygous mice (unpublished data).

simple1

Id Subject Object Predicate Lexical cue
T4521 288-291 Protein denotes βh1
T4520 282-283 Protein denotes ζ

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T5421 302-308 Positive_regulation denotes higher
T5420 223-233 Gene_expression denotes expression
T5419 5-14 Gene_expression denotes expressed
T5410 288-291 Protein denotes βh1
T5409 282-283 Protein denotes ζ
R3876 T5409 T5421 themeOf ζ,higher
R3877 T5409 T5420 themeOf ζ,expression
R3878 T5410 T5421 themeOf βh1,higher
R3879 T5410 T5420 themeOf βh1,expression

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4898 223-233 Gene_expression denotes expression
T4897 96-106 Gene_expression denotes expression
T4896 5-14 Gene_expression denotes expressed
T4888 288-291 Protein denotes βh1
T4887 282-283 Protein denotes ζ
R3457 T4887 T4898 themeOf ζ,expression
R3458 T4888 T4898 themeOf βh1,expression

DLUT931

Id Subject Object Predicate Lexical cue
T4937 302-308 Positive_regulation denotes higher
T4936 223-233 Gene_expression denotes expression
T4935 96-106 Gene_expression denotes expression
T4934 5-14 Gene_expression denotes expressed
T4925 288-291 Protein denotes βh1
T4924 282-283 Protein denotes ζ
R3469 T4924 T4936 themeOf ζ,expression
R3470 T4924 T4937 themeOf ζ,higher
R3471 T4925 T4936 themeOf βh1,expression
R3472 T4925 T4937 themeOf βh1,higher
R3479 T4936 T4937 themeOf expression,higher
R3480 T4936 T4937 themeOf expression,higher

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T5345 119-126 Protein denotes WT mice
T5398 81-126 Regulation denotes the decline in expression observed in WT mice
T5390 344-356 Protein denotes with WT mice
T5379 288-291 Protein denotes βh1
T5376 312-357 Protein denotes p100H homozygous mice, compared with WT mice,
T5366 166-202 Protein denotes heterozygous mice (unpublished data)
T5356 244-292 Protein denotes the other two embryonic globin genes (ζ and βh1)
T5355 53-64 Protein denotes mutant mice
T5354 258-267 Protein denotes embryonic
T5352 282-283 Protein denotes ζ
T5351 244-292 Protein denotes the other two embryonic globin genes (ζ and βh1)

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5139 365-366 DT denotes a
T5138 362-364 TO denotes to
T5137 358-361 CC denotes but
T5136 356-357 , denotes ,
T5135 352-356 NNS denotes mice
T5134 349-351 NNP denotes WT
T5133 344-348 IN denotes with
T5132 335-343 VBN denotes compared
T5131 333-334 , denotes ,
T5130 329-333 NNS denotes mice
T5129 318-328 JJ denotes homozygous
T5128 312-317 JJ denotes p100H
T5127 309-311 IN denotes in
T5126 302-308 JJR denotes higher
T5125 297-301 RB denotes also
T5124 293-296 VBP denotes are
T5123 291-292 -RRB- denotes )
T5122 288-291 CD denotes βh1
T5121 284-287 CC denotes and
T5120 282-283 NN denotes ζ
T5119 281-282 -LRB- denotes (
T5118 275-280 NNS denotes genes
T5117 268-274 NN denotes globin
T5116 258-267 JJ denotes embryonic
T5115 254-257 CD denotes two
T5114 248-253 JJ denotes other
T5113 244-247 DT denotes the
T5112 241-243 IN denotes of
T5111 234-240 NNS denotes levels
T5110 223-233 NN denotes expression
T5109 219-222 DT denotes the
T5108 217-218 , denotes ,
T5107 204-217 RB denotes Interestingly
T5106 202-203 . denotes .
T5105 201-202 -RRB- denotes )
T5104 197-201 NNS denotes data
T5103 185-196 JJ denotes unpublished
T5102 184-185 -LRB- denotes (
T5101 179-183 NNS denotes mice
T5100 166-178 JJ denotes heterozygous
T5099 162-165 CC denotes and
T5098 159-161 NNP denotes WT
T5097 151-158 IN denotes between
T5096 146-150 VBN denotes seen
T5095 142-145 VBD denotes was
T5094 131-141 NN denotes difference
T5093 128-130 DT denotes No
T5092 126-127 . denotes .
T5091 122-126 NNS denotes mice
T5090 119-121 NNP denotes WT
T5089 116-118 IN denotes in
T5088 107-115 VBN denotes observed
T5087 96-106 NN denotes expression
T5086 93-95 IN denotes in
T5085 85-92 NN denotes decline
T5084 81-84 DT denotes the
T5083 78-80 TO denotes to
T5082 69-77 NN denotes contrast
T5081 66-68 IN denotes in
T5080 64-65 , denotes ,
T5079 60-64 NNS denotes mice
T5078 53-59 JJ denotes mutant
T5077 50-52 IN denotes in
T5076 43-49 NNS denotes points
T5075 38-42 NN denotes time
T5074 33-37 DT denotes both
T5073 30-32 IN denotes at
T5072 23-29 NNS denotes levels
T5071 18-22 JJ denotes high
T5070 15-17 IN denotes at
T5069 5-14 VBN denotes expressed
T5068 2-4 VBZ denotes is
R3599 T5068 T5069 auxpass is,expressed
R3600 T5069 T5069 ROOT expressed,expressed
R3601 T5070 T5069 prep at,expressed
R3602 T5071 T5072 amod high,levels
R3603 T5072 T5070 pobj levels,at
R3604 T5073 T5072 prep at,levels
R3605 T5074 T5075 det both,time
R3606 T5075 T5076 compound time,points
R3607 T5076 T5073 pobj points,at
R3608 T5077 T5072 prep in,levels
R3609 T5078 T5079 amod mutant,mice
R3610 T5079 T5077 pobj mice,in
R3611 T5080 T5069 punct ",",expressed
R3612 T5081 T5069 prep in,expressed
R3613 T5082 T5081 pobj contrast,in
R3614 T5083 T5082 prep to,contrast
R3615 T5084 T5085 det the,decline
R3616 T5085 T5083 pobj decline,to
R3617 T5086 T5085 prep in,decline
R3618 T5087 T5086 pobj expression,in
R3619 T5088 T5085 acl observed,decline
R3620 T5089 T5088 prep in,observed
R3621 T5090 T5091 compound WT,mice
R3622 T5091 T5089 pobj mice,in
R3623 T5092 T5069 punct .,expressed
R3624 T5093 T5094 det No,difference
R3625 T5094 T5096 nsubjpass difference,seen
R3626 T5095 T5096 auxpass was,seen
R3627 T5096 T5096 ROOT seen,seen
R3628 T5097 T5096 prep between,seen
R3629 T5098 T5101 nmod WT,mice
R3630 T5099 T5098 cc and,WT
R3631 T5100 T5098 conj heterozygous,WT
R3632 T5101 T5097 pobj mice,between
R3633 T5102 T5104 punct (,data
R3634 T5103 T5104 amod unpublished,data
R3635 T5104 T5101 appos data,mice
R3636 T5105 T5101 punct ),mice
R3637 T5106 T5096 punct .,seen
R3638 T5107 T5124 advmod Interestingly,are
R3639 T5108 T5124 punct ",",are
R3640 T5109 T5111 det the,levels
R3641 T5110 T5111 compound expression,levels
R3642 T5111 T5124 nsubj levels,are
R3643 T5112 T5111 prep of,levels
R3644 T5113 T5118 det the,genes
R3645 T5114 T5118 amod other,genes
R3646 T5115 T5118 nummod two,genes
R3647 T5116 T5118 amod embryonic,genes
R3648 T5117 T5118 compound globin,genes
R3649 T5118 T5112 pobj genes,of
R3650 T5119 T5118 punct (,genes
R3651 T5120 T5118 appos ζ,genes
R3652 T5121 T5120 cc and,ζ
R3653 T5122 T5120 conj βh1,ζ
R3654 T5123 T5118 punct ),genes
R3655 T5124 T5124 ROOT are,are
R3656 T5125 T5124 advmod also,are
R3657 T5126 T5124 acomp higher,are
R3658 T5127 T5126 prep in,higher
R3659 T5128 T5130 amod p100H,mice
R3660 T5129 T5130 amod homozygous,mice
R3661 T5130 T5127 pobj mice,in
R3662 T5131 T5124 punct ",",are
R3663 T5132 T5124 prep compared,are
R3664 T5133 T5132 prep with,compared
R3665 T5134 T5135 compound WT,mice
R3666 T5135 T5133 pobj mice,with
R3667 T5136 T5124 punct ",",are
R3668 T5137 T5124 cc but,are

testone

Id Subject Object Predicate Lexical cue
T4387 223-233 Gene_expression denotes expression
T4386 96-106 Gene_expression denotes expression
T4385 5-14 Gene_expression denotes expressed
T4376 288-291 Protein denotes βh1
T4375 282-283 Protein denotes ζ
R3067 T4375 T4387 themeOf ζ,expression
R3068 T4376 T4387 themeOf βh1,expression

test3

Id Subject Object Predicate Lexical cue
T4414 288-291 Protein denotes βh1
T4413 282-283 Protein denotes ζ
T4399 288-291 Protein denotes βh1
T4398 282-283 Protein denotes ζ