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PMC:1359074 / 864-987 JSONTXT

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pmc-enju-pas

Id Subject Object Predicate Lexical cue
T403 115-120 NN denotes liver
T402 109-114 JJ denotes fetal
T401 99-108 JJ denotes wild-type
T400 96-98 IN denotes in
T399 91-95 NN denotes Sox6
T398 88-90 IN denotes of
T397 77-87 NN denotes expression
T396 70-76 JJ denotes normal
T395 66-69 DT denotes The
T394 56-64 NN denotes promoter
T393 53-55 JJ denotes ɛy
T392 49-52 DT denotes the
T391 46-48 TO denotes to
T390 38-45 VB denotes binding
T389 29-37 RB denotes directly
T388 26-28 IN denotes by
T387 16-25 NN denotes repressor
T386 14-15 DT denotes a
T385 11-13 IN denotes as
T384 6-10 VB denotes acts
T383 1-5 NN denotes Sox6
R174 T383 T384 arg1Of Sox6,acts
R177 T384 T385 arg1Of acts,as
R178 T384 T388 arg1Of acts,by
R179 T387 T385 arg2Of repressor,as
R180 T387 T386 arg1Of repressor,a
R181 T390 T388 arg2Of binding,by
R182 T390 T389 arg1Of binding,directly
R183 T390 T391 arg1Of binding,to
R184 T394 T391 arg2Of promoter,to
R185 T394 T392 arg1Of promoter,the
R186 T394 T393 arg1Of promoter,ɛy
R187 T397 T395 arg1Of expression,The
R188 T397 T396 arg1Of expression,normal
R189 T397 T398 arg1Of expression,of
R190 T397 T400 arg1Of expression,in
R192 T399 T398 arg2Of Sox6,of
R193 T403 T400 arg2Of liver,in
R194 T403 T401 arg1Of liver,wild-type
R195 T403 T402 arg1Of liver,fetal

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T155 1-5 Protein denotes Sox6
T156 53-55 Protein denotes ɛy
T157 91-95 Protein denotes Sox6

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T478 1-5 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T479 91-95 http://www.uniprot.org/uniprot/P35712 denotes Sox6

UBERON-AE

Id Subject Object Predicate Lexical cue
T90 115-120 http://purl.obolibrary.org/obo/UBERON_0002107 denotes liver

GO-MF

Id Subject Object Predicate Lexical cue
T172 38-45 http://purl.obolibrary.org/obo/GO_0005488 denotes binding

simple1

Id Subject Object Predicate Lexical cue
T242 91-95 Protein denotes Sox6
T241 53-55 Protein denotes ɛy
T240 1-5 Protein denotes Sox6

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T885 1-5 Protein denotes Sox6
T886 53-55 Protein denotes ɛy
T887 91-95 Protein denotes Sox6
T899 38-45 Binding denotes binding
T901 77-87 Gene_expression denotes expression
R589 T885 T899 themeOf Sox6,binding
R591 T887 T901 themeOf Sox6,expression
R590 T886 T899 themeOf ɛy,binding

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T493 1-5 Protein denotes Sox6
T494 53-55 Protein denotes ɛy
T495 91-95 Protein denotes Sox6
T509 38-45 Binding denotes binding
T511 77-87 Gene_expression denotes expression
R450 T493 T509 themeOf Sox6,binding
R451 T494 T509 themeOf ɛy,binding
R452 T495 T511 themeOf Sox6,expression

DLUT931

Id Subject Object Predicate Lexical cue
T539 77-87 Gene_expression denotes expression
T524 1-5 Protein denotes Sox6
T525 53-55 Protein denotes ɛy
T526 91-95 Protein denotes Sox6
T538 38-45 Binding denotes binding
R465 T524 T538 themeOf Sox6,binding
R466 T525 T538 themeOf ɛy,binding
R467 T526 T539 themeOf Sox6,expression

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T867 29-64 Binding denotes directly binding to the ɛy promoter
T840 46-64 Entity denotes to the ɛy promoter
T852 88-95 Protein denotes of Sox6
T858 53-55 Protein denotes ɛy
T862 1-5 Protein denotes Sox6
R573 T840 T858 partOf to the ɛy promoter,ɛy
R574 T840 T867 themeOf to the ɛy promoter,directly binding to the ɛy promoter

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T719 46-48 TO denotes to
T718 38-45 JJ denotes binding
T717 29-37 RB denotes directly
T716 26-28 IN denotes by
T715 16-25 NN denotes repressor
T714 14-15 DT denotes a
T713 11-13 IN denotes as
T712 6-10 NNS denotes acts
T711 1-5 JJ denotes Sox6
T720 49-52 DT denotes the
T721 53-55 JJ denotes ɛy
T722 56-64 NN denotes promoter
T723 64-65 . denotes .
T724 66-69 DT denotes The
T725 70-76 JJ denotes normal
T726 77-87 NN denotes expression
T727 88-90 IN denotes of
T728 91-95 NNP denotes Sox6
T729 96-98 IN denotes in
T730 99-108 JJ denotes wild-type
T731 109-114 JJ denotes fetal
T732 115-120 NN denotes liver
R407 T711 T712 amod Sox6,acts
R408 T712 T718 nsubj acts,binding
R409 T713 T712 prep as,acts
R410 T714 T715 det a,repressor
R411 T715 T713 pobj repressor,as
R412 T716 T712 prep by,acts
R413 T717 T718 advmod directly,binding
R415 T719 T718 prep to,binding
R488 T720 T722 det the,promoter
R489 T721 T722 amod ɛy,promoter
R490 T722 T719 pobj promoter,to
R492 T724 T726 det The,expression
R493 T725 T726 amod normal,expression
R495 T727 T726 prep of,expression
R496 T728 T727 pobj Sox6,of
R497 T729 T726 prep in,expression
R498 T730 T732 amod wild-type,liver
R499 T731 T732 amod fetal,liver
R500 T732 T729 pobj liver,in

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T222 77-87 Gene_expression denotes expression
T219 91-95 Protein denotes Sox6
T218 38-45 Binding denotes binding
T217 56-64 Entity denotes promoter
T216 1-5 Protein denotes Sox6
R36 T216 T218 themeOf Sox6,binding
R37 T217 T218 Site promoter,binding
R38 T219 T222 themeOf Sox6,expression

testone

Id Subject Object Predicate Lexical cue
T29 1-5 Protein denotes Sox6
T30 53-55 Protein denotes ɛy
T31 91-95 Protein denotes Sox6
T42 38-45 Binding denotes binding
T43 56-64 Entity denotes promoter
R7 T43 T30 partOf promoter,ɛy
R8 T43 T42 themeOf promoter,binding
R4 T29 T42 themeOf Sox6,binding

test3

Id Subject Object Predicate Lexical cue
T54 1-5 Protein denotes Sox6
T55 53-55 Protein denotes ɛy
T56 91-95 Protein denotes Sox6
T75 1-5 Protein denotes Sox6
T76 38-45 Binding denotes binding
T77 53-55 Protein denotes ɛy
T78 91-95 Protein denotes Sox6
R14 T75 T76 themeOf Sox6,binding
R15 T77 T76 themeOf ɛy,binding