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2_test

Id Subject Object Predicate Lexical cue
16462943-11702786-85760988 245-247 11702786 denotes 13
16462943-10760285-85760989 1160-1162 10760285 denotes 14
16462943-1701019-85760990 1614-1616 1701019 denotes 29
T32068 245-247 11702786 denotes 13
T50025 1160-1162 10760285 denotes 14
T75422 1614-1616 1701019 denotes 29

pmc-enju-pas

Id Subject Object Predicate Lexical cue
T4754 1162-1163 -RRB- denotes ]
T4753 1160-1162 CD denotes 14
T4752 1159-1160 -LRB- denotes [
T4751 1152-1158 NN denotes defect
T4750 1146-1151 NN denotes heart
T4749 1142-1145 DT denotes the
T4748 1137-1141 IN denotes from
T4747 1126-1136 RB denotes presumably
T4746 1125-1126 -LRB- denotes (
T4745 1120-1124 NN denotes mice
T4744 1113-1119 JJ denotes mutant
T4743 1110-1112 IN denotes of
T4742 1100-1109 NN denotes lethality
T4741 1090-1099 JJ denotes Perinatal
T4740 1087-1088 -RRB- denotes )
T4739 1086-1087 CD denotes 1
T4738 1079-1085 NN denotes Figure
T4737 1078-1079 -LRB- denotes (
T4736 1074-1077 NN denotes dpc
T4735 1069-1073 CD denotes 18.5
T4734 1066-1068 IN denotes at
T4733 1061-1065 NN denotes mice
T4732 1058-1060 JJ denotes WT
T4731 1055-1057 IN denotes in
T4730 1050-1054 IN denotes than
T4729 1045-1049 NN denotes mice
T4728 1034-1044 JJ denotes homozygous
T4727 1028-1033 NN denotes p100H
T4726 1025-1027 IN denotes in
T4725 1018-1024 JJ denotes higher
T4724 1009-1017 RB denotes somewhat
T4723 1004-1008 RB denotes also
T4722 1001-1003 VB denotes is
T4721 994-1000 NN denotes globin
T4720 992-993 NN denotes β
T4719 986-991 JJ denotes adult
T4718 983-985 IN denotes of
T4717 977-982 NN denotes level
T4716 966-976 NN denotes expression
T4715 962-965 DT denotes the
T4714 960-961 -COMMA- denotes ,
T4713 952-960 RB denotes Moreover
T4712 949-950 -RRB- denotes )
T4711 948-949 CD denotes 1
T4710 941-947 NN denotes Figure
T4709 940-941 -LRB- denotes (
T4708 936-939 NN denotes dpc
T4707 931-935 CD denotes 18.5
T4706 928-930 IN denotes at
T4705 921-927 NN denotes globin
T4704 918-920 JJ denotes ɛy
T4703 914-917 IN denotes for
T4702 909-913 VB denotes seen
T4701 904-908 IN denotes than
T4700 897-903 NN denotes extent
T4699 890-896 JJ denotes lesser
T4698 885-889 RB denotes much
T4697 883-884 DT denotes a
T4696 880-882 TO denotes to
T4695 876-879 CC denotes but
T4694 874-875 -COMMA- denotes ,
T4693 870-874 NN denotes mice
T4692 867-869 JJ denotes WT
T4691 862-866 IN denotes with
T4690 853-861 VB denotes compared
T4689 851-852 -COMMA- denotes ,
T4688 847-851 NN denotes mice
T4687 836-846 JJ denotes homozygous
T4686 830-835 NN denotes p100H
T4685 827-829 IN denotes in
T4684 820-826 JJ denotes higher
T4683 815-819 RB denotes also
T4682 811-814 VB denotes are
T4681 809-810 -RRB- denotes )
T4680 806-809 NN denotes βh1
T4679 802-805 CC denotes and
T4678 800-801 NN denotes ζ
T4677 799-800 -LRB- denotes (
T4676 793-798 NN denotes genes
T4675 786-792 NN denotes globin
T4674 776-785 JJ denotes embryonic
T4673 772-775 CD denotes two
T4672 766-771 JJ denotes other
T4671 762-765 DT denotes the
T4670 759-761 IN denotes of
T4669 752-758 NN denotes levels
T4668 741-751 NN denotes expression
T4667 737-740 DT denotes the
T4666 735-736 -COMMA- denotes ,
T4665 722-735 RB denotes Interestingly
T4664 719-720 -RRB- denotes )
T4663 715-719 NN denotes data
T4662 703-714 JJ denotes unpublished
T4661 702-703 -LRB- denotes (
T4660 697-701 NN denotes mice
T4659 684-696 JJ denotes heterozygous
T4658 680-683 CC denotes and
T4657 677-679 NN denotes WT
T4656 669-676 IN denotes between
T4655 664-668 VB denotes seen
T4654 660-663 VB denotes was
T4653 649-659 NN denotes difference
T4652 646-648 DT denotes No
T4651 640-644 NN denotes mice
T4650 637-639 JJ denotes WT
T4649 634-636 IN denotes in
T4648 625-633 VB denotes observed
T4647 614-624 NN denotes expression
T4646 611-613 IN denotes in
T4645 603-610 NN denotes decline
T4644 599-602 DT denotes the
T4643 596-598 TO denotes to
T4642 587-595 NN denotes contrast
T4641 584-586 IN denotes in
T4640 582-583 -COMMA- denotes ,
T4639 578-582 NN denotes mice
T4638 571-577 JJ denotes mutant
T4637 568-570 IN denotes in
T4636 561-567 NN denotes points
T4635 556-560 NN denotes time
T4634 551-555 DT denotes both
T4633 548-550 IN denotes at
T4632 541-547 NN denotes levels
T4631 536-540 JJ denotes high
T4630 533-535 IN denotes at
T4629 523-532 VB denotes expressed
T4628 520-522 VB denotes is
T4627 515-519 NN denotes gene
T4626 512-514 JJ denotes ɛy
T4625 508-511 DT denotes the
T4624 506-507 -COMMA- denotes ,
T4623 505-506 CD denotes 1
T4622 498-504 NN denotes Figure
T4621 495-497 IN denotes in
T4620 489-494 VB denotes shown
T4619 486-488 IN denotes As
T4618 481-484 NN denotes dpc
T4617 476-480 CD denotes 18.5
T4616 472-475 CC denotes and
T4615 468-471 NN denotes dpc
T4614 463-467 CD denotes 15.5
T4613 461-462 -COMMA- denotes ,
T4612 455-461 NN denotes stages
T4611 441-454 JJ denotes developmental
T4610 437-440 CD denotes two
T4609 434-436 IN denotes at
T4608 427-433 NN denotes livers
T4607 421-426 NN denotes mouse
T4606 418-420 JJ denotes WT
T4605 414-417 CC denotes and
T4604 407-413 NN denotes mutant
T4603 401-406 NN denotes p100H
T4602 398-400 IN denotes in
T4601 392-397 NN denotes genes
T4600 385-391 NN denotes globin
T4599 379-384 JJ denotes other
T4598 376-378 IN denotes of
T4597 369-375 NN denotes levels
T4596 358-368 NN denotes expression
T4595 354-357 DT denotes the
T4594 343-353 VB denotes quantitate
T4593 340-342 TO denotes to
T4592 335-339 VB denotes used
T4591 331-334 VB denotes was
T4590 327-330 NN denotes PCR
T4589 317-326 JJ denotes Real-time
T4588 314-315 -RRB- denotes )
T4587 310-314 NN denotes data
T4586 298-309 JJ denotes unpublished
T4585 297-298 -LRB- denotes (
T4584 295-296 -RRB- denotes )
T4583 292-295 NN denotes PCR
T4582 291-292 -LRB- denotes (
T4581 282-290 NN denotes reaction
T4580 276-281 NN denotes chain
T4579 265-275 NN denotes polymerase
T4578 255-264 JJ denotes real-time
T4577 249-254 VB denotes using
T4576 247-248 -RRB- denotes ]
T4575 245-247 CD denotes 13
T4574 244-245 -LRB- denotes [
T4573 239-243 NN denotes Sox6
T4572 236-238 IN denotes of
T4571 229-235 NN denotes allele
T4570 219-228 JJ denotes knock-out
T4569 207-218 JJ denotes independent
T4568 204-206 DT denotes an
T4567 201-203 IN denotes in
T4566 191-200 VB denotes confirmed
T4565 187-190 VB denotes was
T4564 175-186 NN denotes observation
T4563 167-174 JJ denotes initial
T4562 162-166 DT denotes This
T4561 153-160 NN denotes targets
T4560 142-152 JJ denotes downstream
T4559 137-141 NN denotes Sox6
T4558 128-136 VB denotes identify
T4557 125-127 TO denotes to
T4556 111-124 NN denotes hybridization
T4555 99-110 JJ denotes subtractive
T4554 93-98 VB denotes using
T4553 87-92 NN denotes mouse
T4552 80-86 NN denotes p 100H
T4551 76-79 DT denotes the
T4550 73-75 IN denotes in
T4549 62-72 NN denotes transcript
T4548 50-61 VB denotes upregulated
T4547 47-49 DT denotes an
T4546 44-46 IN denotes as
T4545 33-43 VB denotes identified
T4544 23-32 RB denotes initially
T4543 19-22 VB denotes was
T4542 14-18 NN denotes gene
T4541 7-13 NN denotes globin
T4540 4-6 JJ denotes ɛy
T4539 0-3 DT denotes The
T4875 1838-1842 NN denotes mice
T4874 1835-1837 JJ denotes WT
T4873 1824-1834 JJ denotes homozygous
T4872 1820-1823 NN denotes dpc
T4871 1815-1819 CD denotes 18.5
T4870 1811-1814 CC denotes and
T4869 1807-1810 NN denotes dpc
T4868 1802-1806 CD denotes 15.5
T4867 1799-1801 IN denotes of
T4866 1792-1798 NN denotes livers
T4865 1788-1791 DT denotes the
T4864 1785-1787 IN denotes in
T4863 1774-1784 NN denotes expression
T4862 1765-1773 NN denotes βmaj/min
T4861 1762-1764 IN denotes of
T4860 1756-1761 NN denotes level
T4859 1752-1755 DT denotes the
T4858 1749-1751 TO denotes to
T4857 1738-1748 JJ denotes equivalent
T4856 1724-1737 RB denotes statistically
T4855 1721-1723 VB denotes is
T4854 1716-1720 NN denotes mice
T4853 1709-1715 JJ denotes mutant
T4852 1698-1708 JJ denotes homozygous
T4851 1694-1697 NN denotes dpc
T4850 1689-1693 CD denotes 18.5
T4849 1685-1688 CC denotes and
T4848 1681-1684 NN denotes dpc
T4847 1676-1680 CD denotes 15.5
T4846 1673-1675 IN denotes of
T4845 1666-1672 NN denotes livers
T4844 1662-1665 DT denotes the
T4843 1659-1661 IN denotes in
T4842 1648-1658 NN denotes expression
T4841 1645-1647 JJ denotes ɛy
T4840 1642-1644 IN denotes of
T4839 1636-1641 NN denotes level
T4838 1632-1635 DT denotes the
T4837 1627-1631 IN denotes that
T4836 1622-1626 VB denotes note
T4835 1619-1621 PRP denotes We
T4834 1616-1617 -RRB- denotes ]
T4833 1614-1616 CD denotes 29
T4832 1613-1614 -LRB- denotes [
T4831 1608-1612 NN denotes mice
T4830 1602-1607 JJ denotes fetal
T4829 1599-1601 JJ denotes WT
T4828 1595-1598 IN denotes for
T4827 1587-1594 NN denotes results
T4826 1577-1586 VB denotes published
T4825 1566-1576 RB denotes previously
T4824 1561-1565 IN denotes with
T4823 1551-1560 NN denotes agreement
T4822 1548-1550 IN denotes in
T4821 1544-1547 VB denotes are
T4820 1540-1543 CC denotes and
T4819 1532-1539 NN denotes samples
T4818 1528-1531 DT denotes all
T4817 1521-1527 IN denotes across
T4816 1510-1520 JJ denotes comparable
T4815 1505-1509 RB denotes thus
T4814 1501-1504 VB denotes are
T4813 1497-1500 CC denotes and
T4812 1490-1496 NN denotes levels
T4811 1481-1489 JJ denotes relative
T4810 1477-1480 VB denotes are
T4809 1471-1476 VB denotes shown
T4808 1464-1470 NN denotes levels
T4807 1460-1463 DT denotes the
T4806 1458-1459 -COMMA- denotes ,
T4805 1451-1458 NN denotes control
T4804 1442-1450 JJ denotes internal
T4803 1437-1441 JJ denotes same
T4802 1433-1436 DT denotes the
T4801 1428-1432 IN denotes with
T4800 1423-1427 NN denotes time
T4799 1418-1422 JJ denotes same
T4798 1414-1417 DT denotes the
T4797 1411-1413 IN denotes at
T4796 1401-1410 VB denotes performed
T4795 1396-1400 VB denotes were
T4794 1389-1395 NN denotes assays
T4793 1385-1388 DT denotes the
T4792 1382-1384 IN denotes of
T4791 1378-1381 DT denotes all
T4790 1370-1377 IN denotes Because
T4789 1367-1368 -RRB- denotes )
T4788 1363-1367 NN denotes bars
T4787 1357-1362 NN denotes error
T4786 1354-1356 IN denotes by
T4785 1348-1353 VB denotes shown
T4784 1345-1347 VB denotes is
T4783 1340-1344 NN denotes data
T4782 1336-1339 DT denotes the
T4781 1333-1335 IN denotes of
T4780 1323-1332 NN denotes deviation
T4779 1314-1322 JJ denotes standard
T4778 1313-1314 -LRB- denotes (
T4777 1302-1312 NN denotes triplicate
T4776 1299-1301 IN denotes in
T4775 1289-1298 VB denotes performed
T4774 1284-1288 VB denotes were
T4773 1279-1283 WDT denotes that
T4772 1271-1278 NN denotes results
T4771 1267-1270 NN denotes PCR
T4770 1262-1266 NN denotes time
T4769 1257-1261 JJ denotes real
T4768 1246-1256 NN denotes illustrate
T4767 1244-1245 CD denotes 1
T4766 1237-1243 NN denotes Figure
T4765 1234-1236 IN denotes in
T4764 1227-1233 NN denotes graphs
T4763 1223-1226 DT denotes The
T4762 1211-1221 NN denotes expression
T4761 1204-1210 NN denotes globin
T4760 1194-1203 JJ denotes postnatal
T4759 1183-1193 VB denotes evaluating
T4758 1178-1182 IN denotes from
T4757 1175-1177 PRP denotes us
T4756 1165-1174 VB denotes precludes
T4755 1163-1164 -RRB- denotes )
R3110 T4542 T4539 arg1Of gene,The
R3111 T4542 T4540 arg1Of gene,ɛy
R3112 T4542 T4541 arg1Of gene,globin
R3113 T4542 T4543 arg1Of gene,was
R3114 T4542 T4545 arg2Of gene,identified
R3115 T4545 T4543 arg2Of identified,was
R3116 T4545 T4544 arg1Of identified,initially
R3117 T4545 T4546 arg1Of identified,as
R3118 T4549 T4546 arg2Of transcript,as
R3119 T4549 T4547 arg1Of transcript,an
R3120 T4549 T4548 arg2Of transcript,upregulated
R3121 T4549 T4550 arg1Of transcript,in
R3122 T4553 T4550 arg2Of mouse,in
R3123 T4553 T4551 arg1Of mouse,the
R3124 T4553 T4552 arg1Of mouse,p 100H
R3125 T4553 T4554 arg1Of mouse,using
R3126 T4554 T4557 modOf using,to
R3127 T4556 T4554 arg2Of hybridization,using
R3128 T4556 T4555 arg1Of hybridization,subtractive
R3129 T4558 T4557 arg1Of identify,to
R3130 T4561 T4558 arg2Of targets,identify
R3131 T4561 T4559 arg1Of targets,Sox6
R3132 T4561 T4560 arg1Of targets,downstream
R3133 T4564 T4562 arg1Of observation,This
R3134 T4564 T4563 arg1Of observation,initial
R3135 T4564 T4565 arg1Of observation,was
R3136 T4564 T4566 arg2Of observation,confirmed
R3137 T4566 T4565 arg2Of confirmed,was
R3138 T4566 T4567 arg1Of confirmed,in
R3139 T4566 T4574 arg1Of confirmed,[
R3140 T4571 T4567 arg2Of allele,in
R3141 T4571 T4568 arg1Of allele,an
R3142 T4571 T4569 arg1Of allele,independent
R3143 T4571 T4570 arg1Of allele,knock-out
R3144 T4571 T4572 arg1Of allele,of
R3145 T4573 T4572 arg2Of Sox6,of
R3146 T4575 T4574 arg2Of 13,[
R3147 T4576 T4574 arg3Of ],[
R3148 T4577 T4566 arg3Of using,confirmed
R3149 T4581 T4577 arg2Of reaction,using
R3150 T4581 T4578 arg1Of reaction,real-time
R3151 T4581 T4579 arg1Of reaction,polymerase
R3152 T4581 T4580 arg1Of reaction,chain
R3153 T4581 T4582 arg1Of reaction,(
R3154 T4581 T4585 arg1Of reaction,(
R3155 T4583 T4582 arg2Of PCR,(
R3156 T4584 T4582 arg3Of ),(
R3157 T4587 T4585 arg2Of data,(
R3158 T4587 T4586 arg1Of data,unpublished
R3159 T4588 T4585 arg3Of ),(
R3160 T4590 T4589 arg1Of PCR,Real-time
R3161 T4590 T4591 arg1Of PCR,was
R3162 T4590 T4592 arg2Of PCR,used
R3163 T4592 T4591 arg2Of used,was
R3164 T4594 T4592 arg3Of quantitate,used
R3165 T4594 T4593 arg1Of quantitate,to
R3166 T4594 T4609 arg1Of quantitate,at
R3167 T4597 T4594 arg2Of levels,quantitate
R3168 T4597 T4595 arg1Of levels,the
R3169 T4597 T4596 arg1Of levels,expression
R3170 T4597 T4598 arg1Of levels,of
R3171 T4601 T4598 arg2Of genes,of
R3172 T4601 T4599 arg1Of genes,other
R3173 T4601 T4600 arg1Of genes,globin
R3174 T4601 T4602 arg1Of genes,in
R3175 T4604 T4603 arg1Of mutant,p100H
R3176 T4604 T4605 arg1Of mutant,and
R3177 T4605 T4602 arg2Of and,in
R3178 T4608 T4605 arg2Of livers,and
R3179 T4608 T4606 arg1Of livers,WT
R3180 T4608 T4607 arg1Of livers,mouse
R3181 T4612 T4610 arg1Of stages,two
R3182 T4612 T4611 arg1Of stages,developmental
R3183 T4612 T4613 arg1Of stages,","
R3184 T4613 T4616 arg1Of ",",and
R3185 T4615 T4613 arg2Of dpc,","
R3186 T4615 T4614 arg1Of dpc,15.5
R3187 T4616 T4609 arg2Of and,at
R3188 T4618 T4616 arg2Of dpc,and
R3189 T4618 T4617 arg1Of dpc,18.5
R3190 T4620 T4619 arg2Of shown,As
R3191 T4620 T4621 arg1Of shown,in
R3192 T4622 T4621 arg2Of Figure,in
R3193 T4622 T4623 arg1Of Figure,1
R3194 T4627 T4625 arg1Of gene,the
R3195 T4627 T4626 arg1Of gene,ɛy
R3196 T4627 T4628 arg1Of gene,is
R3197 T4627 T4629 arg2Of gene,expressed
R3198 T4629 T4619 arg1Of expressed,As
R3199 T4629 T4624 arg1Of expressed,","
R3200 T4629 T4628 arg2Of expressed,is
R3201 T4629 T4630 arg1Of expressed,at
R3202 T4629 T4633 arg1Of expressed,at
R3203 T4629 T4637 arg1Of expressed,in
R3204 T4629 T4640 arg1Of expressed,","
R3205 T4629 T4641 arg1Of expressed,in
R3206 T4632 T4630 arg2Of levels,at
R3207 T4632 T4631 arg1Of levels,high
R3208 T4636 T4633 arg2Of points,at
R3209 T4636 T4634 arg1Of points,both
R3210 T4636 T4635 arg1Of points,time
R3211 T4639 T4637 arg2Of mice,in
R3212 T4639 T4638 arg1Of mice,mutant
R3213 T4641 T4643 arg1Of in,to
R3214 T4642 T4641 arg2Of contrast,in
R3215 T4645 T4641 arg3Of decline,in
R3216 T4645 T4644 arg1Of decline,the
R3217 T4645 T4646 arg1Of decline,in
R3218 T4647 T4646 arg2Of expression,in
R3219 T4647 T4648 arg2Of expression,observed
R3220 T4648 T4649 arg1Of observed,in
R3221 T4651 T4649 arg2Of mice,in
R3222 T4651 T4650 arg1Of mice,WT
R3223 T4653 T4652 arg1Of difference,No
R3224 T4653 T4654 arg1Of difference,was
R3225 T4653 T4655 arg2Of difference,seen
R3226 T4655 T4654 arg2Of seen,was
R3227 T4655 T4656 arg1Of seen,between
R3228 T4657 T4658 arg1Of WT,and
R3229 T4659 T4658 arg2Of heterozygous,and
R3230 T4660 T4656 arg2Of mice,between
R3231 T4660 T4657 arg1Of mice,WT
R3232 T4660 T4659 arg1Of mice,heterozygous
R3233 T4660 T4661 arg1Of mice,(
R3234 T4663 T4661 arg2Of data,(
R3235 T4663 T4662 arg1Of data,unpublished
R3236 T4664 T4661 arg3Of ),(
R3237 T4669 T4667 arg1Of levels,the
R3238 T4669 T4668 arg1Of levels,expression
R3239 T4669 T4670 arg1Of levels,of
R3240 T4669 T4682 arg1Of levels,are
R3241 T4669 T4684 arg1Of levels,higher
R3242 T4676 T4670 arg2Of genes,of
R3243 T4676 T4671 arg1Of genes,the
R3244 T4676 T4672 arg1Of genes,other
R3245 T4676 T4673 arg1Of genes,two
R3246 T4676 T4674 arg1Of genes,embryonic
R3247 T4676 T4675 arg1Of genes,globin
R3248 T4676 T4677 arg1Of genes,(
R3249 T4678 T4679 arg1Of ζ,and
R3250 T4679 T4677 arg2Of and,(
R3251 T4680 T4679 arg2Of βh1,and
R3252 T4681 T4677 arg3Of ),(
R3253 T4682 T4665 arg1Of are,Interestingly
R3254 T4682 T4666 arg1Of are,","
R3255 T4682 T4683 arg1Of are,also
R3256 T4682 T4689 arg1Of are,","
R3257 T4682 T4690 arg1Of are,compared
R3258 T4684 T4682 arg2Of higher,are
R3259 T4684 T4685 arg1Of higher,in
R3260 T4688 T4685 arg2Of mice,in
R3261 T4688 T4686 arg1Of mice,p100H
R3262 T4688 T4687 arg1Of mice,homozygous
R3263 T4691 T4695 arg1Of with,but
R3264 T4693 T4691 arg2Of mice,with
R3265 T4693 T4692 arg1Of mice,WT
R3266 T4695 T4690 arg2Of but,compared
R3267 T4695 T4694 arg1Of but,","
R3268 T4696 T4695 arg2Of to,but
R3269 T4699 T4698 arg1Of lesser,much
R3270 T4700 T4696 arg2Of extent,to
R3271 T4700 T4697 arg1Of extent,a
R3272 T4700 T4699 arg1Of extent,lesser
R3273 T4700 T4701 arg1Of extent,than
R3274 T4702 T4701 arg2Of seen,than
R3275 T4702 T4703 arg1Of seen,for
R3276 T4702 T4706 arg1Of seen,at
R3277 T4705 T4703 arg2Of globin,for
R3278 T4705 T4704 arg1Of globin,ɛy
R3279 T4708 T4706 arg2Of dpc,at
R3280 T4708 T4707 arg1Of dpc,18.5
R3281 T4708 T4709 arg1Of dpc,(
R3282 T4710 T4709 arg2Of Figure,(
R3283 T4710 T4711 arg1Of Figure,1
R3284 T4712 T4709 arg3Of ),(
R3285 T4717 T4715 arg1Of level,the
R3286 T4717 T4716 arg1Of level,expression
R3287 T4717 T4718 arg1Of level,of
R3288 T4717 T4722 arg1Of level,is
R3289 T4717 T4725 arg1Of level,higher
R3290 T4721 T4718 arg2Of globin,of
R3291 T4721 T4719 arg1Of globin,adult
R3292 T4721 T4720 arg1Of globin,β
R3293 T4722 T4713 arg1Of is,Moreover
R3294 T4722 T4714 arg1Of is,","
R3295 T4722 T4723 arg1Of is,also
R3296 T4722 T4734 arg1Of is,at
R3297 T4725 T4722 arg2Of higher,is
R3298 T4725 T4724 arg1Of higher,somewhat
R3299 T4725 T4726 arg1Of higher,in
R3300 T4725 T4730 arg1Of higher,than
R3301 T4729 T4726 arg2Of mice,in
R3302 T4729 T4727 arg1Of mice,p100H
R3303 T4729 T4728 arg1Of mice,homozygous
R3304 T4731 T4730 arg2Of in,than
R3305 T4733 T4731 arg2Of mice,in
R3306 T4733 T4732 arg1Of mice,WT
R3307 T4736 T4734 arg2Of dpc,at
R3308 T4736 T4735 arg1Of dpc,18.5
R3309 T4736 T4737 arg1Of dpc,(
R3310 T4738 T4737 arg2Of Figure,(
R3311 T4738 T4739 arg1Of Figure,1
R3312 T4740 T4737 arg3Of ),(
R3313 T4742 T4741 arg1Of lethality,Perinatal
R3314 T4742 T4743 arg1Of lethality,of
R3315 T4742 T4746 arg1Of lethality,(
R3316 T4742 T4756 arg1Of lethality,precludes
R3317 T4745 T4743 arg2Of mice,of
R3318 T4745 T4744 arg1Of mice,mutant
R3319 T4748 T4746 arg2Of from,(
R3320 T4748 T4747 arg1Of from,presumably
R3321 T4751 T4748 arg2Of defect,from
R3322 T4751 T4749 arg1Of defect,the
R3323 T4751 T4750 arg1Of defect,heart
R3324 T4751 T4752 arg1Of defect,[
R3325 T4753 T4752 arg2Of 14,[
R3326 T4754 T4752 arg3Of ],[
R3327 T4755 T4746 arg3Of ),(
R3328 T4756 T4758 arg1Of precludes,from
R3329 T4757 T4756 arg2Of us,precludes
R3330 T4759 T4758 arg2Of evaluating,from
R3331 T4762 T4759 arg2Of expression,evaluating
R3332 T4762 T4760 arg1Of expression,postnatal
R3333 T4762 T4761 arg1Of expression,globin
R3334 T4764 T4763 arg1Of graphs,The
R3335 T4764 T4765 arg1Of graphs,in
R3336 T4764 T4773 arg1Of graphs,that
R3337 T4764 T4774 arg1Of graphs,were
R3338 T4764 T4775 arg2Of graphs,performed
R3339 T4772 T4765 arg2Of results,in
R3340 T4772 T4766 arg1Of results,Figure
R3341 T4772 T4767 arg1Of results,1
R3342 T4772 T4768 arg1Of results,illustrate
R3343 T4772 T4769 arg1Of results,real
R3344 T4772 T4770 arg1Of results,time
R3345 T4772 T4771 arg1Of results,PCR
R3346 T4775 T4774 arg2Of performed,were
R3347 T4775 T4776 arg1Of performed,in
R3348 T4777 T4776 arg2Of triplicate,in
R3349 T4777 T4778 arg1Of triplicate,(
R3350 T4780 T4779 arg1Of deviation,standard
R3351 T4780 T4781 arg1Of deviation,of
R3352 T4780 T4784 arg1Of deviation,is
R3353 T4780 T4785 arg2Of deviation,shown
R3354 T4783 T4781 arg2Of data,of
R3355 T4783 T4782 arg1Of data,the
R3356 T4785 T4778 arg2Of shown,(
R3357 T4785 T4784 arg2Of shown,is
R3358 T4788 T4785 arg1Of bars,shown
R3359 T4788 T4786 arg2Of bars,by
R3360 T4788 T4787 arg1Of bars,error
R3361 T4789 T4778 arg3Of ),(
R3362 T4791 T4792 arg1Of all,of
R3363 T4791 T4795 arg1Of all,were
R3364 T4791 T4796 arg2Of all,performed
R3365 T4794 T4792 arg2Of assays,of
R3366 T4794 T4793 arg1Of assays,the
R3367 T4796 T4790 arg2Of performed,Because
R3368 T4796 T4795 arg2Of performed,were
R3369 T4796 T4797 arg1Of performed,at
R3370 T4800 T4797 arg2Of time,at
R3371 T4800 T4798 arg1Of time,the
R3372 T4800 T4799 arg1Of time,same
R3373 T4800 T4801 arg1Of time,with
R3374 T4805 T4801 arg2Of control,with
R3375 T4805 T4802 arg1Of control,the
R3376 T4805 T4803 arg1Of control,same
R3377 T4805 T4804 arg1Of control,internal
R3378 T4808 T4807 arg1Of levels,the
R3379 T4808 T4809 arg2Of levels,shown
R3380 T4808 T4810 arg1Of levels,are
R3381 T4808 T4814 arg1Of levels,are
R3382 T4808 T4816 arg1Of levels,comparable
R3383 T4808 T4821 arg1Of levels,are
R3384 T4808 T4822 arg1Of levels,in
R3385 T4810 T4813 arg1Of are,and
R3386 T4812 T4810 arg2Of levels,are
R3387 T4812 T4811 arg1Of levels,relative
R3388 T4813 T4790 arg1Of and,Because
R3389 T4813 T4806 arg1Of and,","
R3390 T4814 T4815 arg1Of are,thus
R3391 T4814 T4817 arg1Of are,across
R3392 T4814 T4820 arg1Of are,and
R3393 T4816 T4814 arg2Of comparable,are
R3394 T4819 T4817 arg2Of samples,across
R3395 T4819 T4818 arg1Of samples,all
R3396 T4820 T4813 arg2Of and,and
R3397 T4821 T4820 arg2Of are,and
R3398 T4822 T4821 arg2Of in,are
R3399 T4823 T4822 arg2Of agreement,in
R3400 T4823 T4824 arg1Of agreement,with
R3401 T4826 T4825 arg1Of published,previously
R3402 T4827 T4824 arg2Of results,with
R3403 T4827 T4826 arg1Of results,published
R3404 T4827 T4828 arg1Of results,for
R3405 T4831 T4828 arg2Of mice,for
R3406 T4831 T4829 arg1Of mice,WT
R3407 T4831 T4830 arg1Of mice,fetal
R3408 T4831 T4832 arg1Of mice,[
R3409 T4833 T4832 arg2Of 29,[
R3410 T4834 T4832 arg3Of ],[
R3411 T4835 T4836 arg1Of We,note
R3412 T4839 T4838 arg1Of level,the
R3413 T4839 T4840 arg1Of level,of
R3414 T4839 T4855 arg1Of level,is
R3415 T4839 T4857 arg1Of level,equivalent
R3416 T4842 T4840 arg2Of expression,of
R3417 T4842 T4841 arg1Of expression,ɛy
R3418 T4842 T4843 arg1Of expression,in
R3419 T4845 T4843 arg2Of livers,in
R3420 T4845 T4844 arg1Of livers,the
R3421 T4845 T4846 arg1Of livers,of
R3422 T4848 T4847 arg1Of dpc,15.5
R3423 T4848 T4849 arg1Of dpc,and
R3424 T4849 T4846 arg2Of and,of
R3425 T4854 T4849 arg2Of mice,and
R3426 T4854 T4850 arg1Of mice,18.5
R3427 T4854 T4851 arg1Of mice,dpc
R3428 T4854 T4852 arg1Of mice,homozygous
R3429 T4854 T4853 arg1Of mice,mutant
R3430 T4855 T4836 arg2Of is,note
R3431 T4855 T4837 arg1Of is,that
R3432 T4857 T4855 arg2Of equivalent,is
R3433 T4857 T4856 arg1Of equivalent,statistically
R3434 T4857 T4858 arg1Of equivalent,to
R3435 T4860 T4858 arg2Of level,to
R3436 T4860 T4859 arg1Of level,the
R3437 T4860 T4861 arg1Of level,of
R3438 T4863 T4861 arg2Of expression,of
R3439 T4863 T4862 arg1Of expression,βmaj/min
R3440 T4863 T4864 arg1Of expression,in
R3441 T4866 T4864 arg2Of livers,in
R3442 T4866 T4865 arg1Of livers,the
R3443 T4866 T4867 arg1Of livers,of
R3444 T4869 T4868 arg1Of dpc,15.5
R3445 T4869 T4870 arg1Of dpc,and
R3446 T4870 T4867 arg2Of and,of
R3447 T4875 T4870 arg2Of mice,and
R3448 T4875 T4871 arg1Of mice,18.5
R3449 T4875 T4872 arg1Of mice,dpc
R3450 T4875 T4873 arg1Of mice,homozygous
R3451 T4875 T4874 arg1Of mice,WT

bionlp-st-ge-2016-test-proteins

Id Subject Object Predicate Lexical cue
T4486 1770-1773 Protein denotes min
T4485 1765-1769 Protein denotes βmaj
T4484 1645-1647 Protein denotes ɛy
T4483 992-1000 Protein denotes β globin
T4482 918-927 Protein denotes ɛy globin
T4481 806-809 Protein denotes βh1
T4480 800-801 Protein denotes ζ
T4479 512-514 Protein denotes ɛy
T4478 239-243 Protein denotes Sox6
T4477 137-141 Protein denotes Sox6
T4476 4-13 Protein denotes ɛy globin

bionlp-st-ge-2016-uniprot

Id Subject Object Predicate Lexical cue
T4878 239-243 http://www.uniprot.org/uniprot/P35712 denotes Sox6
T4877 137-141 http://www.uniprot.org/uniprot/P35712 denotes Sox6

UBERON-AE

Id Subject Object Predicate Lexical cue
T4426 1146-1151 http://purl.obolibrary.org/obo/UBERON_0000948 denotes heart
T4425 1792-1798 http://purl.obolibrary.org/obo/UBERON_0002107 denotes livers
T4424 1666-1672 http://purl.obolibrary.org/obo/UBERON_0002107 denotes livers
T4423 427-433 http://purl.obolibrary.org/obo/UBERON_0002107 denotes livers

GO-BP

Id Subject Object Predicate Lexical cue
T4445 1204-1210 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4444 994-1000 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4443 921-927 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4442 786-792 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4441 385-391 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4440 7-13 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

GO-MF

Id Subject Object Predicate Lexical cue
T4493 1204-1210 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4492 994-1000 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4491 921-927 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4490 786-792 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4489 385-391 http://purl.obolibrary.org/obo/GO_0005344 denotes globin
T4488 7-13 http://purl.obolibrary.org/obo/GO_0005344 denotes globin

sentences

Id Subject Object Predicate Lexical cue
T4438 1619-1843 Sentence denotes We note that the level of ɛy expression in the livers of 15.5 dpc and 18.5 dpc homozygous mutant mice is statistically equivalent to the level of βmaj/min expression in the livers of 15.5 dpc and 18.5 dpc homozygous WT mice.
T4437 1370-1618 Sentence denotes Because all of the assays were performed at the same time with the same internal control, the levels shown are relative levels and are thus comparable across all samples and are in agreement with previously published results for WT fetal mice [29].
T4436 1223-1369 Sentence denotes The graphs in Figure 1 illustrate real time PCR results that were performed in triplicate (standard deviation of the data is shown by error bars).
T4435 1090-1222 Sentence denotes Perinatal lethality of mutant mice (presumably from the heart defect [14]) precludes us from evaluating postnatal globin expression.
T4434 952-1089 Sentence denotes Moreover, the expression level of adult β globin is also somewhat higher in p100H homozygous mice than in WT mice at 18.5 dpc (Figure 1).
T4433 722-951 Sentence denotes Interestingly, the expression levels of the other two embryonic globin genes (ζ and βh1) are also higher in p100H homozygous mice, compared with WT mice, but to a much lesser extent than seen for ɛy globin at 18.5 dpc (Figure 1).
T4432 646-721 Sentence denotes No difference was seen between WT and heterozygous mice (unpublished data).
T4431 486-645 Sentence denotes As shown in Figure 1, the ɛy gene is expressed at high levels at both time points in mutant mice, in contrast to the decline in expression observed in WT mice.
T4430 317-485 Sentence denotes Real-time PCR was used to quantitate the expression levels of other globin genes in p100H mutant and WT mouse livers at two developmental stages, 15.5 dpc and 18.5 dpc.
T4429 162-316 Sentence denotes This initial observation was confirmed in an independent knock-out allele of Sox6 [13] using real-time polymerase chain reaction (PCR) (unpublished data).
T4428 0-161 Sentence denotes The ɛy globin gene was initially identified as an upregulated transcript in the p 100H mouse using subtractive hybridization to identify Sox6 downstream targets.
T57 0-161 Sentence denotes The ɛy globin gene was initially identified as an upregulated transcript in the p 100H mouse using subtractive hybridization to identify Sox6 downstream targets.
T58 162-316 Sentence denotes This initial observation was confirmed in an independent knock-out allele of Sox6 [13] using real-time polymerase chain reaction (PCR) (unpublished data).
T59 317-485 Sentence denotes Real-time PCR was used to quantitate the expression levels of other globin genes in p100H mutant and WT mouse livers at two developmental stages, 15.5 dpc and 18.5 dpc.
T60 486-645 Sentence denotes As shown in Figure 1, the ɛy gene is expressed at high levels at both time points in mutant mice, in contrast to the decline in expression observed in WT mice.
T61 646-721 Sentence denotes No difference was seen between WT and heterozygous mice (unpublished data).
T62 722-951 Sentence denotes Interestingly, the expression levels of the other two embryonic globin genes (ζ and βh1) are also higher in p100H homozygous mice, compared with WT mice, but to a much lesser extent than seen for ɛy globin at 18.5 dpc (Figure 1).
T63 952-1089 Sentence denotes Moreover, the expression level of adult β globin is also somewhat higher in p100H homozygous mice than in WT mice at 18.5 dpc (Figure 1).
T64 1090-1222 Sentence denotes Perinatal lethality of mutant mice (presumably from the heart defect [14]) precludes us from evaluating postnatal globin expression.
T65 1223-1369 Sentence denotes The graphs in Figure 1 illustrate real time PCR results that were performed in triplicate (standard deviation of the data is shown by error bars).
T66 1370-1618 Sentence denotes Because all of the assays were performed at the same time with the same internal control, the levels shown are relative levels and are thus comparable across all samples and are in agreement with previously published results for WT fetal mice [29].
T67 1619-1843 Sentence denotes We note that the level of ɛy expression in the livers of 15.5 dpc and 18.5 dpc homozygous mutant mice is statistically equivalent to the level of βmaj/min expression in the livers of 15.5 dpc and 18.5 dpc homozygous WT mice.

simple1

Id Subject Object Predicate Lexical cue
T4526 1770-1773 Protein denotes min
T4525 1765-1769 Protein denotes βmaj
T4524 1645-1647 Protein denotes ɛy
T4523 992-1000 Protein denotes β globin
T4522 918-927 Protein denotes ɛy globin
T4521 806-809 Protein denotes βh1
T4520 800-801 Protein denotes ζ
T4519 512-514 Protein denotes ɛy
T4518 239-243 Protein denotes Sox6
T4517 137-141 Protein denotes Sox6
T4516 4-13 Protein denotes ɛy globin

BioNLP16_DUT

Id Subject Object Predicate Lexical cue
T5425 1648-1658 Gene_expression denotes expression
T5424 1636-1641 Negative_regulation denotes level
T5423 1774-1784 Gene_expression denotes expression
T5422 966-976 Gene_expression denotes expression
T5421 820-826 Positive_regulation denotes higher
T5420 741-751 Gene_expression denotes expression
T5419 523-532 Gene_expression denotes expressed
T5418 50-61 Positive_regulation denotes upregulated
T5417 153-160 Regulation denotes targets
T5414 1770-1773 Protein denotes min
T5413 1765-1769 Protein denotes βmaj
T5412 1645-1647 Protein denotes ɛy
T5411 992-1000 Protein denotes β globin
T5410 806-809 Protein denotes βh1
T5409 800-801 Protein denotes ζ
T5408 918-927 Protein denotes ɛy globin
T5407 512-514 Protein denotes ɛy
T5406 239-243 Protein denotes Sox6
T5405 137-141 Protein denotes Sox6
T5404 4-13 Protein denotes ɛy globin
R3873 T5404 T5418 themeOf ɛy globin,upregulated
R3874 T5405 T5417 themeOf Sox6,targets
R3875 T5407 T5419 themeOf ɛy,expressed
R3876 T5409 T5421 themeOf ζ,higher
R3877 T5409 T5420 themeOf ζ,expression
R3878 T5410 T5421 themeOf βh1,higher
R3879 T5410 T5420 themeOf βh1,expression
R3880 T5411 T5422 themeOf β globin,expression
R3881 T5412 T5425 themeOf ɛy,expression
R3882 T5413 T5423 themeOf βmaj,expression
R3883 T5414 T5423 themeOf min,expression
R3884 T5425 T5424 themeOf expression,level

BioNLP16_Messiy

Id Subject Object Predicate Lexical cue
T4901 1774-1784 Gene_expression denotes expression
T4900 1648-1658 Gene_expression denotes expression
T4899 966-976 Gene_expression denotes expression
T4898 741-751 Gene_expression denotes expression
T4897 614-624 Gene_expression denotes expression
T4896 523-532 Gene_expression denotes expressed
T4895 153-160 Regulation denotes targets
T4892 1770-1773 Protein denotes min
T4891 1765-1769 Protein denotes βmaj
T4890 1645-1647 Protein denotes ɛy
T4889 992-1000 Protein denotes β globin
T4888 806-809 Protein denotes βh1
T4887 800-801 Protein denotes ζ
T4886 918-927 Protein denotes ɛy globin
T4885 512-514 Protein denotes ɛy
T4884 239-243 Protein denotes Sox6
T4883 137-141 Protein denotes Sox6
T4882 4-13 Protein denotes ɛy globin
R3454 T4883 T4895 themeOf Sox6,targets
R3455 T4885 T4896 themeOf ɛy,expressed
R3456 T4885 T4897 themeOf ɛy,expression
R3457 T4887 T4898 themeOf ζ,expression
R3458 T4888 T4898 themeOf βh1,expression
R3459 T4889 T4899 themeOf β globin,expression
R3460 T4890 T4900 themeOf ɛy,expression
R3461 T4891 T4901 themeOf βmaj,expression
R3462 T4892 T4901 themeOf min,expression

DLUT931

Id Subject Object Predicate Lexical cue
T4943 1738-1748 Positive_regulation denotes equivalent
T4942 1636-1641 Negative_regulation denotes level
T4941 1774-1784 Gene_expression denotes expression
T4940 1648-1658 Gene_expression denotes expression
T4939 1018-1024 Positive_regulation denotes higher
T4938 966-976 Gene_expression denotes expression
T4937 820-826 Positive_regulation denotes higher
T4936 741-751 Gene_expression denotes expression
T4935 614-624 Gene_expression denotes expression
T4934 523-532 Gene_expression denotes expressed
T4933 153-160 Regulation denotes targets
T4929 1770-1773 Protein denotes min
T4928 1765-1769 Protein denotes βmaj
T4927 1645-1647 Protein denotes ɛy
T4926 992-1000 Protein denotes β globin
T4925 806-809 Protein denotes βh1
T4924 800-801 Protein denotes ζ
T4923 918-927 Protein denotes ɛy globin
T4922 512-514 Protein denotes ɛy
T4921 239-243 Protein denotes Sox6
T4920 137-141 Protein denotes Sox6
T4919 4-13 Protein denotes ɛy globin
R3466 T4920 T4933 themeOf Sox6,targets
R3467 T4922 T4934 themeOf ɛy,expressed
R3468 T4922 T4935 themeOf ɛy,expression
R3469 T4924 T4936 themeOf ζ,expression
R3470 T4924 T4937 themeOf ζ,higher
R3471 T4925 T4936 themeOf βh1,expression
R3472 T4925 T4937 themeOf βh1,higher
R3473 T4926 T4938 themeOf β globin,expression
R3474 T4927 T4940 themeOf ɛy,expression
R3475 T4928 T4941 themeOf βmaj,expression
R3476 T4929 T4941 themeOf min,expression
R3479 T4936 T4937 themeOf expression,higher
R3480 T4936 T4937 themeOf expression,higher
R3481 T4938 T4939 themeOf expression,higher
R3482 T4940 T4942 themeOf expression,level
R3483 T4941 T4943 themeOf expression,equivalent
R3484 T4941 T4943 themeOf expression,equivalent

bionlp-st-ge-2016-test-ihmc

Id Subject Object Predicate Lexical cue
T5345 637-644 Protein denotes WT mice
T5400 47-160 Positive_regulation denotes an upregulated transcript in the p 100H mouse using subtractive hybridization to identify Sox6 downstream targets
T5399 1645-1720 Gene_expression denotes ɛy expression in the livers of 15.5 dpc and 18.5 dpc homozygous mutant mice
T5398 599-644 Regulation denotes the decline in expression observed in WT mice
T5397 1175-1221 Gene_expression denotes us from evaluating postnatal globin expression
T5396 495-547 Gene_expression denotes in Figure 1, the ɛy gene is expressed at high levels
T5394 0-18 Protein denotes The ɛy globin gene
T5393 1267-1270 Protein denotes PCR
T5392 1802-1810 Entity denotes 15.5 dpc
T5391 1765-1773 Protein denotes βmaj/min
T5390 862-874 Protein denotes with WT mice
T5389 476-484 Entity denotes 18.5 dpc
T5388 1599-1617 Protein denotes WT fetal mice [29]
T5387 1204-1210 Protein denotes globin
T5386 239-243 Protein denotes Sox6
T5385 1645-1647 Protein denotes ɛy
T5384 986-1000 Protein denotes adult β globin
T5383 463-471 Entity denotes 15.5 dpc
T5382 1676-1684 Entity denotes 15.5 dpc
T5381 317-330 Protein denotes Real-time PCR
T5380 1110-1124 Protein denotes of mutant mice
T5379 806-809 Protein denotes βh1
T5377 931-950 Entity denotes 18.5 dpc (Figure 1)
T5376 830-875 Protein denotes p100H homozygous mice, compared with WT mice,
T5374 1765-1773 Protein denotes βmaj/min
T5373 1069-1088 Entity denotes 18.5 dpc (Figure 1)
T5372 1058-1088 Protein denotes WT mice at 18.5 dpc (Figure 1)
T5371 508-519 Protein denotes the ɛy gene
T5370 1694-1697 Entity denotes dpc
T5369 385-391 Protein denotes globin
T5368 7-13 Protein denotes globin
T5367 512-514 Protein denotes ɛy
T5366 684-720 Protein denotes heterozygous mice (unpublished data)
T5365 1689-1720 Protein denotes 18.5 dpc homozygous mutant mice
T5364 1815-1842 Protein denotes 18.5 dpc homozygous WT mice
T5363 204-248 Protein denotes an independent knock-out allele of Sox6 [13]
T5362 1770-1773 Protein denotes min
T5361 1820-1823 Entity denotes dpc
T5359 292-295 Protein denotes PCR
T5357 0-18 Protein denotes The ɛy globin gene
T5356 762-810 Protein denotes the other two embryonic globin genes (ζ and βh1)
T5355 571-582 Protein denotes mutant mice
T5354 776-785 Protein denotes embryonic
T5353 379-397 Protein denotes other globin genes
T5352 800-801 Protein denotes ζ
T5351 762-810 Protein denotes the other two embryonic globin genes (ζ and βh1)
T5350 918-927 Protein denotes ɛy globin
T5348 137-152 Protein denotes Sox6 downstream
T5347 47-160 Protein denotes an upregulated transcript in the p 100H mouse using subtractive hybridization to identify Sox6 downstream targets
T5346 1028-1049 Protein denotes p100H homozygous mice
R3865 T5347 T5400 themeOf an upregulated transcript in the p 100H mouse using subtractive hybridization to identify Sox6 downstream targets,an upregulated transcript in the p 100H mouse using subtractive hybridization to identify Sox6 downstream targets
R3867 T5371 T5396 themeOf the ɛy gene,"in Figure 1, the ɛy gene is expressed at high levels"
R3868 T5385 T5399 themeOf ɛy,ɛy expression in the livers of 15.5 dpc and 18.5 dpc homozygous mutant mice
R3869 T5387 T5397 themeOf globin,us from evaluating postnatal globin expression

bionlp-st-ge-2016-spacy-parsed

Id Subject Object Predicate Lexical cue
T5325 1842-1843 . denotes .
T5324 1838-1842 NNS denotes mice
T5323 1835-1837 NNP denotes WT
T5322 1824-1834 JJ denotes homozygous
T5321 1820-1823 NN denotes dpc
T5320 1815-1819 CD denotes 18.5
T5319 1811-1814 CC denotes and
T5318 1807-1810 NN denotes dpc
T5317 1802-1806 CD denotes 15.5
T5316 1799-1801 IN denotes of
T5315 1792-1798 NNS denotes livers
T5314 1788-1791 DT denotes the
T5313 1785-1787 IN denotes in
T5312 1774-1784 NN denotes expression
T5311 1770-1773 NN denotes min
T5310 1769-1770 NN denotes /
T5309 1765-1769 NN denotes βmaj
T5308 1762-1764 IN denotes of
T5307 1756-1761 NN denotes level
T5306 1752-1755 DT denotes the
T5305 1749-1751 TO denotes to
T5304 1738-1748 JJ denotes equivalent
T5303 1724-1737 RB denotes statistically
T5302 1721-1723 VBZ denotes is
T5301 1716-1720 NNS denotes mice
T5300 1709-1715 JJ denotes mutant
T5299 1698-1708 JJ denotes homozygous
T5298 1694-1697 NN denotes dpc
T5297 1689-1693 CD denotes 18.5
T5296 1685-1688 CC denotes and
T5295 1681-1684 NN denotes dpc
T5294 1676-1680 CD denotes 15.5
T5293 1673-1675 IN denotes of
T5292 1666-1672 NNS denotes livers
T5291 1662-1665 DT denotes the
T5290 1659-1661 IN denotes in
T5289 1648-1658 NN denotes expression
T5288 1645-1647 JJ denotes ɛy
T5287 1642-1644 IN denotes of
T5286 1636-1641 NN denotes level
T5285 1632-1635 DT denotes the
T5284 1627-1631 IN denotes that
T5283 1622-1626 VBP denotes note
T5282 1619-1621 PRP denotes We
T5281 1617-1618 . denotes .
T5280 1616-1617 NNP denotes ]
T5279 1614-1616 CD denotes 29
T5278 1613-1614 NNP denotes [
T5277 1608-1612 NNS denotes mice
T5276 1602-1607 JJ denotes fetal
T5275 1599-1601 NNP denotes WT
T5274 1595-1598 IN denotes for
T5273 1587-1594 NNS denotes results
T5272 1577-1586 VBN denotes published
T5271 1566-1576 RB denotes previously
T5270 1561-1565 IN denotes with
T5269 1551-1560 NN denotes agreement
T5268 1548-1550 IN denotes in
T5267 1544-1547 VBP denotes are
T5266 1540-1543 CC denotes and
T5265 1532-1539 NNS denotes samples
T5264 1528-1531 DT denotes all
T5263 1521-1527 IN denotes across
T5262 1510-1520 JJ denotes comparable
T5261 1505-1509 RB denotes thus
T5260 1501-1504 VBP denotes are
T5259 1497-1500 CC denotes and
T5258 1490-1496 NNS denotes levels
T5257 1481-1489 JJ denotes relative
T5256 1477-1480 VBP denotes are
T5255 1471-1476 VBN denotes shown
T5254 1464-1470 NNS denotes levels
T5253 1460-1463 DT denotes the
T5252 1458-1459 , denotes ,
T5251 1451-1458 NN denotes control
T5250 1442-1450 JJ denotes internal
T5249 1437-1441 JJ denotes same
T5248 1433-1436 DT denotes the
T5247 1428-1432 IN denotes with
T5246 1423-1427 NN denotes time
T5245 1418-1422 JJ denotes same
T5244 1414-1417 DT denotes the
T5243 1411-1413 IN denotes at
T5242 1401-1410 VBN denotes performed
T5241 1396-1400 VBD denotes were
T5240 1389-1395 NNS denotes assays
T5239 1385-1388 DT denotes the
T5238 1382-1384 IN denotes of
T5237 1378-1381 DT denotes all
T5236 1370-1377 IN denotes Because
T5235 1368-1369 . denotes .
T5234 1367-1368 -RRB- denotes )
T5233 1363-1367 NNS denotes bars
T5232 1357-1362 NN denotes error
T5231 1354-1356 IN denotes by
T5230 1348-1353 VBN denotes shown
T5229 1345-1347 VBZ denotes is
T5228 1340-1344 NN denotes data
T5227 1336-1339 DT denotes the
T5226 1333-1335 IN denotes of
T5225 1323-1332 NN denotes deviation
T5224 1314-1322 JJ denotes standard
T5223 1313-1314 -LRB- denotes (
T5222 1302-1312 NN denotes triplicate
T5221 1299-1301 IN denotes in
T5220 1289-1298 VBN denotes performed
T5219 1284-1288 VBD denotes were
T5218 1279-1283 WDT denotes that
T5217 1271-1278 NNS denotes results
T5216 1267-1270 NNP denotes PCR
T5215 1262-1266 NN denotes time
T5214 1257-1261 JJ denotes real
T5213 1246-1256 VBP denotes illustrate
T5212 1244-1245 CD denotes 1
T5211 1237-1243 NN denotes Figure
T5210 1234-1236 IN denotes in
T5209 1227-1233 NNS denotes graphs
T5208 1223-1226 DT denotes The
T5207 1221-1222 . denotes .
T5206 1211-1221 NN denotes expression
T5205 1204-1210 NN denotes globin
T5204 1194-1203 JJ denotes postnatal
T5203 1183-1193 VBG denotes evaluating
T5202 1178-1182 IN denotes from
T5201 1175-1177 PRP denotes us
T5200 1165-1174 VBZ denotes precludes
T5199 1163-1164 -RRB- denotes )
T5198 1162-1163 NNP denotes ]
T5197 1160-1162 CD denotes 14
T5196 1159-1160 NNP denotes [
T5195 1152-1158 NN denotes defect
T5194 1146-1151 NN denotes heart
T5193 1142-1145 DT denotes the
T5192 1137-1141 IN denotes from
T5191 1126-1136 RB denotes presumably
T5190 1125-1126 -LRB- denotes (
T5189 1120-1124 NNS denotes mice
T5188 1113-1119 JJ denotes mutant
T5187 1110-1112 IN denotes of
T5186 1100-1109 NN denotes lethality
T5185 1090-1099 JJ denotes Perinatal
T5184 1088-1089 . denotes .
T5183 1087-1088 -RRB- denotes )
T5182 1086-1087 CD denotes 1
T5181 1079-1085 NN denotes Figure
T5180 1078-1079 -LRB- denotes (
T5179 1074-1077 NN denotes dpc
T5178 1069-1073 CD denotes 18.5
T5177 1066-1068 IN denotes at
T5176 1061-1065 NNS denotes mice
T5175 1058-1060 NNP denotes WT
T5174 1055-1057 IN denotes in
T5173 1050-1054 IN denotes than
T5172 1045-1049 NNS denotes mice
T5171 1034-1044 JJ denotes homozygous
T5170 1028-1033 JJ denotes p100H
T5169 1025-1027 IN denotes in
T5168 1018-1024 JJR denotes higher
T5167 1009-1017 RB denotes somewhat
T5166 1004-1008 RB denotes also
T5165 1001-1003 VBZ denotes is
T5164 994-1000 NN denotes globin
T5163 992-993 NN denotes β
T5162 986-991 NN denotes adult
T5161 983-985 IN denotes of
T5160 977-982 NN denotes level
T5159 966-976 NN denotes expression
T5158 962-965 DT denotes the
T5157 960-961 , denotes ,
T5156 952-960 RB denotes Moreover
T5155 950-951 . denotes .
T5154 949-950 -RRB- denotes )
T5153 948-949 CD denotes 1
T5152 941-947 NN denotes Figure
T5151 940-941 -LRB- denotes (
T5150 936-939 NN denotes dpc
T5149 931-935 CD denotes 18.5
T5148 928-930 IN denotes at
T5147 921-927 NN denotes globin
T5146 918-920 JJ denotes ɛy
T5145 914-917 IN denotes for
T5144 909-913 VBN denotes seen
T5143 904-908 IN denotes than
T5142 897-903 NN denotes extent
T5141 890-896 JJR denotes lesser
T5140 885-889 JJ denotes much
T5139 883-884 DT denotes a
T5138 880-882 TO denotes to
T5137 876-879 CC denotes but
T5136 874-875 , denotes ,
T5135 870-874 NNS denotes mice
T5134 867-869 NNP denotes WT
T5133 862-866 IN denotes with
T5132 853-861 VBN denotes compared
T5131 851-852 , denotes ,
T5130 847-851 NNS denotes mice
T5129 836-846 JJ denotes homozygous
T5128 830-835 JJ denotes p100H
T5127 827-829 IN denotes in
T5126 820-826 JJR denotes higher
T5125 815-819 RB denotes also
T5124 811-814 VBP denotes are
T5123 809-810 -RRB- denotes )
T5122 806-809 CD denotes βh1
T5121 802-805 CC denotes and
T5120 800-801 NN denotes ζ
T5119 799-800 -LRB- denotes (
T5118 793-798 NNS denotes genes
T5117 786-792 NN denotes globin
T5116 776-785 JJ denotes embryonic
T5115 772-775 CD denotes two
T5114 766-771 JJ denotes other
T5113 762-765 DT denotes the
T5112 759-761 IN denotes of
T5111 752-758 NNS denotes levels
T5110 741-751 NN denotes expression
T5109 737-740 DT denotes the
T5108 735-736 , denotes ,
T5107 722-735 RB denotes Interestingly
T5106 720-721 . denotes .
T5105 719-720 -RRB- denotes )
T5104 715-719 NNS denotes data
T5103 703-714 JJ denotes unpublished
T5102 702-703 -LRB- denotes (
T5101 697-701 NNS denotes mice
T5100 684-696 JJ denotes heterozygous
T5099 680-683 CC denotes and
T5098 677-679 NNP denotes WT
T5097 669-676 IN denotes between
T5096 664-668 VBN denotes seen
T5095 660-663 VBD denotes was
T5094 649-659 NN denotes difference
T5093 646-648 DT denotes No
T5092 644-645 . denotes .
T5091 640-644 NNS denotes mice
T5090 637-639 NNP denotes WT
T5089 634-636 IN denotes in
T5088 625-633 VBN denotes observed
T5087 614-624 NN denotes expression
T5086 611-613 IN denotes in
T5085 603-610 NN denotes decline
T5084 599-602 DT denotes the
T5083 596-598 TO denotes to
T5082 587-595 NN denotes contrast
T5081 584-586 IN denotes in
T5080 582-583 , denotes ,
T5079 578-582 NNS denotes mice
T5078 571-577 JJ denotes mutant
T5077 568-570 IN denotes in
T5076 561-567 NNS denotes points
T5075 556-560 NN denotes time
T5074 551-555 DT denotes both
T5073 548-550 IN denotes at
T5072 541-547 NNS denotes levels
T5071 536-540 JJ denotes high
T5070 533-535 IN denotes at
T5069 523-532 VBN denotes expressed
T5068 520-522 VBZ denotes is
T5067 515-519 NN denotes gene
T5066 512-514 JJ denotes ɛy
T5065 508-511 DT denotes the
T5064 506-507 , denotes ,
T5063 505-506 CD denotes 1
T5062 498-504 NN denotes Figure
T5061 495-497 IN denotes in
T5060 489-494 VBN denotes shown
T5059 486-488 IN denotes As
T5058 484-485 . denotes .
T5057 481-484 NN denotes dpc
T5056 476-480 CD denotes 18.5
T5055 472-475 CC denotes and
T5054 468-471 NN denotes dpc
T5053 463-467 CD denotes 15.5
T5052 461-462 , denotes ,
T5051 455-461 NNS denotes stages
T5050 441-454 JJ denotes developmental
T5049 437-440 CD denotes two
T5048 434-436 IN denotes at
T5047 427-433 NNS denotes livers
T5046 421-426 NN denotes mouse
T5045 418-420 NNP denotes WT
T5044 414-417 CC denotes and
T5043 407-413 JJ denotes mutant
T5042 401-406 JJ denotes p100H
T5041 398-400 IN denotes in
T5040 392-397 NNS denotes genes
T5039 385-391 NN denotes globin
T5038 379-384 JJ denotes other
T5037 376-378 IN denotes of
T5036 369-375 NNS denotes levels
T5035 358-368 NN denotes expression
T5034 354-357 DT denotes the
T5033 343-353 VB denotes quantitate
T5032 340-342 TO denotes to
T5031 335-339 VBN denotes used
T5030 331-334 VBD denotes was
T5029 327-330 NNP denotes PCR
T5028 317-326 JJ denotes Real-time
T5027 315-316 . denotes .
T5026 314-315 -RRB- denotes )
T5025 310-314 NNS denotes data
T5024 298-309 JJ denotes unpublished
T5023 297-298 -LRB- denotes (
T5022 295-296 -RRB- denotes )
T5021 292-295 NNP denotes PCR
T5020 291-292 -LRB- denotes (
T5019 282-290 NN denotes reaction
T5018 276-281 NN denotes chain
T5017 265-275 NN denotes polymerase
T5016 255-264 JJ denotes real-time
T5015 249-254 VBG denotes using
T5014 247-248 NNP denotes ]
T5013 245-247 CD denotes 13
T5012 244-245 NNP denotes [
T5011 239-243 NNP denotes Sox6
T5010 236-238 IN denotes of
T5009 229-235 NN denotes allele
T5008 219-228 JJ denotes knock-out
T5007 207-218 JJ denotes independent
T5006 204-206 DT denotes an
T5005 201-203 IN denotes in
T5004 191-200 VBN denotes confirmed
T5003 187-190 VBD denotes was
T5002 175-186 NN denotes observation
T5001 167-174 JJ denotes initial
T5000 162-166 DT denotes This
T4999 160-161 . denotes .
T4998 153-160 NNS denotes targets
T4997 142-152 JJ denotes downstream
T4996 137-141 JJ denotes Sox6
T4995 128-136 VB denotes identify
T4994 125-127 TO denotes to
T4993 111-124 NN denotes hybridization
T4992 99-110 JJ denotes subtractive
T4991 93-98 VBG denotes using
T4990 87-92 NN denotes mouse
T4989 80-86 JJ denotes p 100H
T4988 76-79 DT denotes the
T4987 73-75 IN denotes in
T4986 62-72 NN denotes transcript
T4985 50-61 JJ denotes upregulated
T4984 47-49 DT denotes an
T4983 44-46 IN denotes as
T4982 33-43 VBN denotes identified
T4981 23-32 RB denotes initially
T4980 19-22 VBD denotes was
T4979 14-18 NN denotes gene
T4978 7-13 NN denotes globin
T4977 4-6 JJ denotes ɛy
T4976 0-3 DT denotes The
R3507 T4976 T4979 det The,gene
R3508 T4977 T4979 amod ɛy,gene
R3509 T4978 T4979 compound globin,gene
R3510 T4979 T4982 nsubjpass gene,identified
R3511 T4980 T4982 auxpass was,identified
R3512 T4981 T4982 advmod initially,identified
R3513 T4982 T4982 ROOT identified,identified
R3514 T4983 T4982 prep as,identified
R3515 T4984 T4986 det an,transcript
R3516 T4985 T4986 amod upregulated,transcript
R3517 T4986 T4983 pobj transcript,as
R3518 T4987 T4986 prep in,transcript
R3519 T4988 T4990 det the,mouse
R3520 T4989 T4990 amod p 100H,mouse
R3521 T4990 T4987 pobj mouse,in
R3522 T4991 T4986 acl using,transcript
R3523 T4992 T4993 amod subtractive,hybridization
R3524 T4993 T4991 dobj hybridization,using
R3525 T4994 T4995 aux to,identify
R3526 T4995 T4991 xcomp identify,using
R3527 T4996 T4998 amod Sox6,targets
R3528 T4997 T4998 amod downstream,targets
R3529 T4998 T4995 dobj targets,identify
R3530 T4999 T4982 punct .,identified
R3531 T5000 T5002 det This,observation
R3532 T5001 T5002 amod initial,observation
R3533 T5002 T5004 nsubjpass observation,confirmed
R3534 T5003 T5004 auxpass was,confirmed
R3535 T5004 T5004 ROOT confirmed,confirmed
R3536 T5005 T5004 prep in,confirmed
R3537 T5006 T5009 det an,allele
R3538 T5007 T5009 amod independent,allele
R3539 T5008 T5009 amod knock-out,allele
R3540 T5009 T5005 pobj allele,in
R3541 T5010 T5009 prep of,allele
R3542 T5011 T5012 compound Sox6,[
R3543 T5012 T5010 pobj [,of
R3544 T5013 T5014 nummod 13,]
R3545 T5014 T5009 appos ],allele
R3546 T5015 T5004 advcl using,confirmed
R3547 T5016 T5019 amod real-time,reaction
R3548 T5017 T5019 compound polymerase,reaction
R3549 T5018 T5019 compound chain,reaction
R3550 T5019 T5015 dobj reaction,using
R3551 T5020 T5019 punct (,reaction
R3552 T5021 T5019 appos PCR,reaction
R3553 T5022 T5019 punct ),reaction
R3554 T5023 T5019 punct (,reaction
R3555 T5024 T5025 amod unpublished,data
R3556 T5025 T5019 appos data,reaction
R3557 T5026 T5019 punct ),reaction
R3558 T5027 T5004 punct .,confirmed
R3559 T5028 T5029 compound Real-time,PCR
R3560 T5029 T5031 nsubjpass PCR,used
R3561 T5030 T5031 auxpass was,used
R3562 T5031 T5031 ROOT used,used
R3563 T5032 T5033 aux to,quantitate
R3564 T5033 T5031 xcomp quantitate,used
R3565 T5034 T5036 det the,levels
R3566 T5035 T5036 compound expression,levels
R3567 T5036 T5033 dobj levels,quantitate
R3568 T5037 T5036 prep of,levels
R3569 T5038 T5040 amod other,genes
R3570 T5039 T5040 compound globin,genes
R3571 T5040 T5037 pobj genes,of
R3572 T5041 T5040 prep in,genes
R3573 T5042 T5043 amod p100H,mutant
R3574 T5043 T5047 amod mutant,livers
R3575 T5044 T5043 cc and,mutant
R3576 T5045 T5047 compound WT,livers
R3577 T5046 T5047 compound mouse,livers
R3578 T5047 T5041 pobj livers,in
R3579 T5048 T5033 prep at,quantitate
R3580 T5049 T5051 nummod two,stages
R3581 T5050 T5051 amod developmental,stages
R3582 T5051 T5048 pobj stages,at
R3583 T5052 T5051 punct ",",stages
R3584 T5053 T5057 nummod 15.5,dpc
R3585 T5054 T5057 nmod dpc,dpc
R3586 T5055 T5054 cc and,dpc
R3587 T5056 T5057 nummod 18.5,dpc
R3588 T5057 T5051 appos dpc,stages
R3589 T5058 T5031 punct .,used
R3590 T5059 T5060 mark As,shown
R3591 T5060 T5069 advcl shown,expressed
R3592 T5061 T5060 prep in,shown
R3593 T5062 T5061 pobj Figure,in
R3594 T5063 T5062 nummod 1,Figure
R3595 T5064 T5069 punct ",",expressed
R3596 T5065 T5067 det the,gene
R3597 T5066 T5067 amod ɛy,gene
R3598 T5067 T5069 nsubjpass gene,expressed
R3599 T5068 T5069 auxpass is,expressed
R3600 T5069 T5069 ROOT expressed,expressed
R3601 T5070 T5069 prep at,expressed
R3602 T5071 T5072 amod high,levels
R3603 T5072 T5070 pobj levels,at
R3604 T5073 T5072 prep at,levels
R3605 T5074 T5075 det both,time
R3606 T5075 T5076 compound time,points
R3607 T5076 T5073 pobj points,at
R3608 T5077 T5072 prep in,levels
R3609 T5078 T5079 amod mutant,mice
R3610 T5079 T5077 pobj mice,in
R3611 T5080 T5069 punct ",",expressed
R3612 T5081 T5069 prep in,expressed
R3613 T5082 T5081 pobj contrast,in
R3614 T5083 T5082 prep to,contrast
R3615 T5084 T5085 det the,decline
R3616 T5085 T5083 pobj decline,to
R3617 T5086 T5085 prep in,decline
R3618 T5087 T5086 pobj expression,in
R3619 T5088 T5085 acl observed,decline
R3620 T5089 T5088 prep in,observed
R3621 T5090 T5091 compound WT,mice
R3622 T5091 T5089 pobj mice,in
R3623 T5092 T5069 punct .,expressed
R3624 T5093 T5094 det No,difference
R3625 T5094 T5096 nsubjpass difference,seen
R3626 T5095 T5096 auxpass was,seen
R3627 T5096 T5096 ROOT seen,seen
R3628 T5097 T5096 prep between,seen
R3629 T5098 T5101 nmod WT,mice
R3630 T5099 T5098 cc and,WT
R3631 T5100 T5098 conj heterozygous,WT
R3632 T5101 T5097 pobj mice,between
R3633 T5102 T5104 punct (,data
R3634 T5103 T5104 amod unpublished,data
R3635 T5104 T5101 appos data,mice
R3636 T5105 T5101 punct ),mice
R3637 T5106 T5096 punct .,seen
R3638 T5107 T5124 advmod Interestingly,are
R3639 T5108 T5124 punct ",",are
R3640 T5109 T5111 det the,levels
R3641 T5110 T5111 compound expression,levels
R3642 T5111 T5124 nsubj levels,are
R3643 T5112 T5111 prep of,levels
R3644 T5113 T5118 det the,genes
R3645 T5114 T5118 amod other,genes
R3646 T5115 T5118 nummod two,genes
R3647 T5116 T5118 amod embryonic,genes
R3648 T5117 T5118 compound globin,genes
R3649 T5118 T5112 pobj genes,of
R3650 T5119 T5118 punct (,genes
R3651 T5120 T5118 appos ζ,genes
R3652 T5121 T5120 cc and,ζ
R3653 T5122 T5120 conj βh1,ζ
R3654 T5123 T5118 punct ),genes
R3655 T5124 T5124 ROOT are,are
R3656 T5125 T5124 advmod also,are
R3657 T5126 T5124 acomp higher,are
R3658 T5127 T5126 prep in,higher
R3659 T5128 T5130 amod p100H,mice
R3660 T5129 T5130 amod homozygous,mice
R3661 T5130 T5127 pobj mice,in
R3662 T5131 T5124 punct ",",are
R3663 T5132 T5124 prep compared,are
R3664 T5133 T5132 prep with,compared
R3665 T5134 T5135 compound WT,mice
R3666 T5135 T5133 pobj mice,with
R3667 T5136 T5124 punct ",",are
R3668 T5137 T5124 cc but,are
R3669 T5138 T5144 prep to,seen
R3670 T5139 T5142 det a,extent
R3671 T5140 T5141 advmod much,lesser
R3672 T5141 T5142 amod lesser,extent
R3673 T5142 T5138 pobj extent,to
R3674 T5143 T5144 mark than,seen
R3675 T5144 T5124 conj seen,are
R3676 T5145 T5144 prep for,seen
R3677 T5146 T5147 amod ɛy,globin
R3678 T5147 T5145 pobj globin,for
R3679 T5148 T5144 prep at,seen
R3680 T5149 T5150 nummod 18.5,dpc
R3681 T5150 T5148 pobj dpc,at
R3682 T5151 T5152 punct (,Figure
R3683 T5152 T5144 conj Figure,seen
R3684 T5153 T5152 nummod 1,Figure
R3685 T5154 T5152 punct ),Figure
R3686 T5155 T5124 punct .,are
R3687 T5156 T5165 advmod Moreover,is
R3688 T5157 T5165 punct ",",is
R3689 T5158 T5160 det the,level
R3690 T5159 T5160 compound expression,level
R3691 T5160 T5165 nsubj level,is
R3692 T5161 T5160 prep of,level
R3693 T5162 T5164 amod adult,globin
R3694 T5163 T5164 compound β,globin
R3695 T5164 T5161 pobj globin,of
R3696 T5165 T5165 ROOT is,is
R3697 T5166 T5165 advmod also,is
R3698 T5167 T5168 advmod somewhat,higher
R3699 T5168 T5165 acomp higher,is
R3700 T5169 T5168 prep in,higher
R3701 T5170 T5172 amod p100H,mice
R3702 T5171 T5172 amod homozygous,mice
R3703 T5172 T5169 pobj mice,in
R3704 T5173 T5168 prep than,higher
R3705 T5174 T5173 prep in,than
R3706 T5175 T5176 compound WT,mice
R3707 T5176 T5174 pobj mice,in
R3708 T5177 T5165 prep at,is
R3709 T5178 T5179 nummod 18.5,dpc
R3710 T5179 T5177 pobj dpc,at
R3711 T5180 T5181 punct (,Figure
R3712 T5181 T5165 npadvmod Figure,is
R3713 T5182 T5181 nummod 1,Figure
R3714 T5183 T5181 punct ),Figure
R3715 T5184 T5165 punct .,is
R3716 T5185 T5186 amod Perinatal,lethality
R3717 T5186 T5200 nsubj lethality,precludes
R3718 T5187 T5186 prep of,lethality
R3719 T5188 T5189 amod mutant,mice
R3720 T5189 T5187 pobj mice,of
R3721 T5190 T5192 punct (,from
R3722 T5191 T5192 advmod presumably,from
R3723 T5192 T5186 prep from,lethality
R3724 T5193 T5195 det the,defect
R3725 T5194 T5195 compound heart,defect
R3726 T5195 T5192 pobj defect,from
R3727 T5196 T5200 nsubj [,precludes
R3728 T5197 T5198 nummod 14,]
R3729 T5198 T5196 appos ],[
R3730 T5199 T5196 punct ),[
R3731 T5200 T5200 ROOT precludes,precludes
R3732 T5201 T5200 dobj us,precludes
R3733 T5202 T5200 prep from,precludes
R3734 T5203 T5202 pcomp evaluating,from
R3735 T5204 T5206 amod postnatal,expression
R3736 T5205 T5206 compound globin,expression
R3737 T5206 T5203 dobj expression,evaluating
R3738 T5207 T5200 punct .,precludes
R3739 T5208 T5209 det The,graphs
R3740 T5209 T5213 nsubj graphs,illustrate
R3741 T5210 T5209 prep in,graphs
R3742 T5211 T5210 pobj Figure,in
R3743 T5212 T5211 nummod 1,Figure
R3744 T5213 T5213 ROOT illustrate,illustrate
R3745 T5214 T5215 amod real,time
R3746 T5215 T5217 compound time,results
R3747 T5216 T5217 compound PCR,results
R3748 T5217 T5213 dobj results,illustrate
R3749 T5218 T5220 nsubjpass that,performed
R3750 T5219 T5220 auxpass were,performed
R3751 T5220 T5217 relcl performed,results
R3752 T5221 T5220 prep in,performed
R3753 T5222 T5221 pobj triplicate,in
R3754 T5223 T5222 punct (,triplicate
R3755 T5224 T5225 amod standard,deviation
R3756 T5225 T5230 nsubjpass deviation,shown
R3757 T5226 T5225 prep of,deviation
R3758 T5227 T5228 det the,data
R3759 T5228 T5226 pobj data,of
R3760 T5229 T5230 auxpass is,shown
R3761 T5230 T5213 ccomp shown,illustrate
R3762 T5231 T5230 agent by,shown
R3763 T5232 T5233 compound error,bars
R3764 T5233 T5231 pobj bars,by
R3765 T5234 T5230 punct ),shown
R3766 T5235 T5213 punct .,illustrate
R3767 T5236 T5242 mark Because,performed
R3768 T5237 T5242 nsubjpass all,performed
R3769 T5238 T5237 prep of,all
R3770 T5239 T5240 det the,assays
R3771 T5240 T5238 pobj assays,of
R3772 T5241 T5242 auxpass were,performed
R3773 T5242 T5256 advcl performed,are
R3774 T5243 T5242 prep at,performed
R3775 T5244 T5246 det the,time
R3776 T5245 T5246 amod same,time
R3777 T5246 T5243 pobj time,at
R3778 T5247 T5242 prep with,performed
R3779 T5248 T5251 det the,control
R3780 T5249 T5251 amod same,control
R3781 T5250 T5251 amod internal,control
R3782 T5251 T5247 pobj control,with
R3783 T5252 T5256 punct ",",are
R3784 T5253 T5254 det the,levels
R3785 T5254 T5256 nsubj levels,are
R3786 T5255 T5254 acl shown,levels
R3787 T5256 T5256 ROOT are,are
R3788 T5257 T5258 amod relative,levels
R3789 T5258 T5256 attr levels,are
R3790 T5259 T5256 cc and,are
R3791 T5260 T5256 conj are,are
R3792 T5261 T5262 advmod thus,comparable
R3793 T5262 T5260 acomp comparable,are
R3794 T5263 T5260 prep across,are
R3795 T5264 T5265 det all,samples
R3796 T5265 T5263 pobj samples,across
R3797 T5266 T5260 cc and,are
R3798 T5267 T5260 conj are,are
R3799 T5268 T5267 prep in,are
R3800 T5269 T5268 pobj agreement,in
R3801 T5270 T5269 prep with,agreement
R3802 T5271 T5272 advmod previously,published
R3803 T5272 T5273 amod published,results
R3804 T5273 T5270 pobj results,with
R3805 T5274 T5273 prep for,results
R3806 T5275 T5277 nmod WT,mice
R3807 T5276 T5277 amod fetal,mice
R3808 T5277 T5274 pobj mice,for
R3809 T5278 T5280 nmod [,]
R3810 T5279 T5280 nummod 29,]
R3811 T5280 T5277 appos ],mice
R3812 T5281 T5256 punct .,are
R3813 T5282 T5283 nsubj We,note
R3814 T5283 T5283 ROOT note,note
R3815 T5284 T5302 mark that,is
R3816 T5285 T5286 det the,level
R3817 T5286 T5302 nsubj level,is
R3818 T5287 T5286 prep of,level
R3819 T5288 T5289 amod ɛy,expression
R3820 T5289 T5287 pobj expression,of
R3821 T5290 T5286 prep in,level
R3822 T5291 T5292 det the,livers
R3823 T5292 T5290 pobj livers,in
R3824 T5293 T5292 prep of,livers
R3825 T5294 T5301 nummod 15.5,mice
R3826 T5295 T5301 nmod dpc,mice
R3827 T5296 T5295 cc and,dpc
R3828 T5297 T5298 nummod 18.5,dpc
R3829 T5298 T5301 nmod dpc,mice
R3830 T5299 T5301 amod homozygous,mice
R3831 T5300 T5301 amod mutant,mice
R3832 T5301 T5293 pobj mice,of
R3833 T5302 T5283 ccomp is,note
R3834 T5303 T5304 advmod statistically,equivalent
R3835 T5304 T5302 acomp equivalent,is
R3836 T5305 T5304 prep to,equivalent
R3837 T5306 T5307 det the,level
R3838 T5307 T5305 pobj level,to
R3839 T5308 T5307 prep of,level
R3840 T5309 T5312 compound βmaj,expression
R3841 T5310 T5312 compound /,expression
R3842 T5311 T5312 compound min,expression
R3843 T5312 T5308 pobj expression,of
R3844 T5313 T5307 prep in,level
R3845 T5314 T5315 det the,livers
R3846 T5315 T5313 pobj livers,in
R3847 T5316 T5315 prep of,livers
R3848 T5317 T5324 nummod 15.5,mice
R3849 T5318 T5324 nmod dpc,mice
R3850 T5319 T5318 cc and,dpc
R3851 T5320 T5321 nummod 18.5,dpc
R3852 T5321 T5324 nmod dpc,mice
R3853 T5322 T5324 amod homozygous,mice
R3854 T5323 T5324 compound WT,mice
R3855 T5324 T5316 pobj mice,of
R3856 T5325 T5283 punct .,note

bionlp-st-ge-2016-test-tees

Id Subject Object Predicate Lexical cue
T4512 1774-1784 Gene_expression denotes expression
T4511 1835-1842 Protein denotes WT mice
T4510 1211-1221 Gene_expression denotes expression
T4509 1204-1210 Protein denotes globin
T4508 966-976 Gene_expression denotes expression
T4507 986-1000 Protein denotes adult β globin
T4506 918-927 Protein denotes ɛy globin
T4505 358-368 Gene_expression denotes expression
T4504 358-368 Gene_expression denotes expression
T4503 401-406 Protein denotes p100H
T4502 385-397 Protein denotes globin genes
T4501 239-243 Protein denotes Sox6
T4500 50-61 Positive_regulation denotes upregulated
T4499 137-160 Protein denotes Sox6 downstream targets
T4498 7-18 Protein denotes globin gene
R3093 T4498 T4500 themeOf globin gene,upregulated
R3094 T4502 T4504 themeOf globin genes,expression
R3095 T4503 T4505 themeOf p100H,expression
R3096 T4507 T4508 themeOf adult β globin,expression
R3097 T4509 T4510 themeOf globin,expression
R3098 T4511 T4512 themeOf WT mice,expression

testone

Id Subject Object Predicate Lexical cue
T4390 1774-1784 Gene_expression denotes expression
T4389 1648-1658 Gene_expression denotes expression
T4388 966-976 Gene_expression denotes expression
T4387 741-751 Gene_expression denotes expression
T4386 614-624 Gene_expression denotes expression
T4385 523-532 Gene_expression denotes expressed
T4384 358-368 Gene_expression denotes expression
T4381 1770-1773 Protein denotes min
T4380 1765-1769 Protein denotes βmaj
T4379 1645-1647 Protein denotes ɛy
T4378 992-1000 Protein denotes β globin
T4377 918-927 Protein denotes ɛy globin
T4376 806-809 Protein denotes βh1
T4375 800-801 Protein denotes ζ
T4374 512-514 Protein denotes ɛy
T4373 239-243 Protein denotes Sox6
T4372 137-141 Protein denotes Sox6
T4371 4-13 Protein denotes ɛy globin
R3065 T4374 T4386 themeOf ɛy,expression
R3066 T4374 T4385 themeOf ɛy,expressed
R3067 T4375 T4387 themeOf ζ,expression
R3068 T4376 T4387 themeOf βh1,expression
R3069 T4378 T4388 themeOf β globin,expression
R3070 T4379 T4389 themeOf ɛy,expression
R3071 T4380 T4390 themeOf βmaj,expression
R3072 T4381 T4390 themeOf min,expression

test3

Id Subject Object Predicate Lexical cue
T4422 1774-1784 Gene_expression denotes expression
T4421 1770-1773 Protein denotes min
T4420 1765-1769 Protein denotes βmaj
T4419 1648-1658 Gene_expression denotes expression
T4418 1645-1647 Protein denotes ɛy
T4417 992-1000 Protein denotes β globin
T4416 966-976 Gene_expression denotes expression
T4415 918-927 Protein denotes ɛy globin
T4414 806-809 Protein denotes βh1
T4413 800-801 Protein denotes ζ
T4412 512-514 Protein denotes ɛy
T4411 239-243 Protein denotes Sox6
T4410 137-141 Protein denotes Sox6
T4409 4-13 Protein denotes ɛy globin
T4404 1770-1773 Protein denotes min
T4403 1765-1769 Protein denotes βmaj
T4402 1645-1647 Protein denotes ɛy
T4401 992-1000 Protein denotes β globin
T4400 918-927 Protein denotes ɛy globin
T4399 806-809 Protein denotes βh1
T4398 800-801 Protein denotes ζ
T4397 512-514 Protein denotes ɛy
T4396 239-243 Protein denotes Sox6
T4395 137-141 Protein denotes Sox6
T4394 4-13 Protein denotes ɛy globin
R3074 T4417 T4416 themeOf β globin,expression
R3075 T4418 T4419 themeOf ɛy,expression
R3076 T4420 T4422 themeOf βmaj,expression
R3077 T4421 T4422 themeOf min,expression