PMC:1359074 / 8312-8454
Annnotations
pmc-enju-pas
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2683 | 127-141 | NN | denotes | erythropoiesis |
T2682 | 116-126 | JJ | denotes | definitive |
T2681 | 113-115 | IN | denotes | in |
T2680 | 103-112 | NN | denotes | functions |
T2679 | 98-102 | NN | denotes | Sox6 |
T2678 | 93-97 | IN | denotes | that |
T2677 | 79-92 | VB | denotes | demonstrating |
T2676 | 77-78 | -COMMA- | denotes | , |
T2675 | 72-77 | NN | denotes | liver |
T2674 | 66-71 | JJ | denotes | fetal |
T2673 | 62-65 | DT | denotes | the |
T2672 | 59-61 | IN | denotes | in |
T2671 | 49-58 | VB | denotes | expressed |
T2670 | 37-48 | RB | denotes | ectopically |
T2669 | 34-36 | VB | denotes | is |
T2668 | 27-33 | NN | denotes | globin |
T2667 | 24-26 | JJ | denotes | ɛy |
T2666 | 22-23 | -COMMA- | denotes | , |
T2665 | 18-22 | NN | denotes | Sox6 |
T2664 | 15-17 | IN | denotes | of |
T2663 | 7-14 | NN | denotes | absence |
T2662 | 3-6 | DT | denotes | the |
T2661 | 0-2 | IN | denotes | In |
R1733 | T2661 | T2662 | arg1Of | In,the |
R1734 | T2661 | T2664 | arg1Of | In,of |
R1736 | T2663 | T2661 | arg2Of | absence,In |
R1738 | T2665 | T2661 | arg3Of | Sox6,In |
R1739 | T2668 | T2667 | arg1Of | globin,ɛy |
R1740 | T2668 | T2669 | arg1Of | globin,is |
R1741 | T2668 | T2671 | arg2Of | globin,expressed |
R1742 | T2671 | T2661 | arg1Of | expressed,In |
R1744 | T2671 | T2666 | arg1Of | expressed,"," |
R1745 | T2671 | T2669 | arg2Of | expressed,is |
R1746 | T2671 | T2670 | arg1Of | expressed,ectopically |
R1747 | T2671 | T2672 | arg1Of | expressed,in |
R1748 | T2671 | T2676 | arg1Of | expressed,"," |
R1749 | T2671 | T2677 | modOf | expressed,demonstrating |
R1752 | T2675 | T2672 | arg2Of | liver,in |
R1753 | T2675 | T2673 | arg1Of | liver,the |
R1754 | T2675 | T2674 | arg1Of | liver,fetal |
R1757 | T2680 | T2677 | arg2Of | functions,demonstrating |
R1758 | T2680 | T2678 | arg1Of | functions,that |
R1759 | T2680 | T2679 | arg1Of | functions,Sox6 |
R1760 | T2680 | T2681 | arg1Of | functions,in |
R1761 | T2683 | T2681 | arg2Of | erythropoiesis,in |
R1762 | T2683 | T2682 | arg1Of | erythropoiesis,definitive |
bionlp-st-ge-2016-test-proteins
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1468 | 98-102 | Protein | denotes | Sox6 |
T1467 | 24-33 | Protein | denotes | ɛy globin |
T1466 | 18-22 | Protein | denotes | Sox6 |
GO-BP
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1287 | 116-141 | http://purl.obolibrary.org/obo/GO_0060318 | denotes | definitive erythropoiesis |
T1284 | 127-141 | http://purl.obolibrary.org/obo/GO_0030218 | denotes | erythropoiesis |
T1276 | 27-33 | http://purl.obolibrary.org/obo/GO_0005344 | denotes | globin |
GO-MF
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1482 | 27-33 | http://purl.obolibrary.org/obo/GO_0005344 | denotes | globin |
sentences
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1234 | 0-142 | Sentence | denotes | In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis. |
T54 | 0-142 | Sentence | denotes | In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis. |
simple1
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1695 | 98-102 | Protein | denotes | Sox6 |
T1694 | 24-33 | Protein | denotes | ɛy globin |
T1693 | 18-22 | Protein | denotes | Sox6 |
BioNLP16_DUT
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4299 | 49-58 | Gene_expression | denotes | expressed |
T4298 | 7-14 | Negative_regulation | denotes | absence |
T4273 | 98-102 | Protein | denotes | Sox6 |
T4272 | 24-33 | Protein | denotes | ɛy globin |
T4271 | 18-22 | Protein | denotes | Sox6 |
R3056 | T4271 | T4298 | themeOf | Sox6,absence |
R3057 | T4272 | T4299 | themeOf | ɛy globin,expressed |
R3058 | T4272 | T4298 | themeOf | ɛy globin,absence |
BioNLP16_Messiy
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2737 | 98-102 | Protein | denotes | Sox6 |
T2736 | 24-33 | Protein | denotes | ɛy globin |
T2735 | 18-22 | Protein | denotes | Sox6 |
T2761 | 7-14 | Negative_regulation | denotes | absence |
R1847 | T2735 | T2761 | themeOf | Sox6,absence |
DLUT931
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T2844 | 7-14 | Negative_regulation | denotes | absence |
T2815 | 98-102 | Protein | denotes | Sox6 |
T2814 | 24-33 | Protein | denotes | ɛy globin |
T2813 | 18-22 | Protein | denotes | Sox6 |
R1881 | T2814 | T2844 | themeOf | ɛy globin,absence |
bionlp-st-ge-2016-test-ihmc
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T4101 | 24-33 | Protein | denotes | ɛy globin |
T4205 | 0-141 | Gene_expression | denotes | In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis |
T4178 | 15-22 | Protein | denotes | of Sox6 |
T4159 | 98-102 | Protein | denotes | Sox6 |
R3016 | T4101 | T4205 | themeOf | ɛy globin,"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis" |
bionlp-st-ge-2016-spacy-parsed
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T3941 | 141-142 | . | denotes | . |
T3940 | 127-141 | NNS | denotes | erythropoiesis |
T3939 | 116-126 | JJ | denotes | definitive |
T3938 | 113-115 | IN | denotes | in |
T3937 | 103-112 | NNS | denotes | functions |
T3936 | 98-102 | JJ | denotes | Sox6 |
T3935 | 93-97 | IN | denotes | that |
T3934 | 79-92 | VBG | denotes | demonstrating |
T3933 | 77-78 | , | denotes | , |
T3932 | 72-77 | NN | denotes | liver |
T3931 | 66-71 | JJ | denotes | fetal |
T3930 | 62-65 | DT | denotes | the |
T3929 | 59-61 | IN | denotes | in |
T3928 | 49-58 | VBN | denotes | expressed |
T3927 | 37-48 | RB | denotes | ectopically |
T3926 | 34-36 | VBZ | denotes | is |
T3925 | 27-33 | NN | denotes | globin |
T3924 | 24-26 | JJ | denotes | ɛy |
T3923 | 22-23 | , | denotes | , |
T3922 | 18-22 | NNP | denotes | Sox6 |
T3921 | 15-17 | IN | denotes | of |
T3920 | 7-14 | NN | denotes | absence |
T3919 | 3-6 | DT | denotes | the |
T3918 | 0-2 | IN | denotes | In |
R2891 | T3918 | T3928 | prep | In,expressed |
R2893 | T3919 | T3920 | det | the,absence |
R2894 | T3920 | T3918 | pobj | absence,In |
R2895 | T3921 | T3920 | prep | of,absence |
R2897 | T3922 | T3921 | pobj | Sox6,of |
R2898 | T3923 | T3928 | punct | ",",expressed |
R2899 | T3924 | T3925 | amod | ɛy,globin |
R2901 | T3925 | T3928 | nsubjpass | globin,expressed |
R2902 | T3926 | T3928 | auxpass | is,expressed |
R2904 | T3927 | T3928 | advmod | ectopically,expressed |
R2905 | T3928 | T3928 | ROOT | expressed,expressed |
R2906 | T3929 | T3928 | prep | in,expressed |
R2908 | T3930 | T3932 | det | the,liver |
R2909 | T3931 | T3932 | amod | fetal,liver |
R2910 | T3932 | T3929 | pobj | liver,in |
R2912 | T3933 | T3928 | punct | ",",expressed |
R2913 | T3934 | T3928 | advcl | demonstrating,expressed |
R2914 | T3935 | T3934 | dobj | that,demonstrating |
R2916 | T3936 | T3937 | amod | Sox6,functions |
R2917 | T3937 | T3935 | nsubj | functions,that |
R2919 | T3938 | T3937 | prep | in,functions |
R2920 | T3939 | T3940 | amod | definitive,erythropoiesis |
R2921 | T3940 | T3938 | pobj | erythropoiesis,in |
R2922 | T3941 | T3928 | punct | .,expressed |
bionlp-st-ge-2016-test-tees
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1587 | 7-14 | Negative_regulation | denotes | absence |
T1586 | 98-102 | Protein | denotes | Sox6 |
T1585 | 24-33 | Protein | denotes | ɛy globin |
T1584 | 18-22 | Protein | denotes | Sox6 |
R799 | T1585 | T1587 | themeOf | ɛy globin,absence |
testone
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1065 | 49-58 | Gene_expression | denotes | expressed |
T1064 | 7-14 | Negative_regulation | denotes | absence |
T1031 | 98-102 | Protein | denotes | Sox6 |
T1030 | 24-33 | Protein | denotes | ɛy globin |
T1029 | 18-22 | Protein | denotes | Sox6 |
R630 | T1029 | T1064 | themeOf | Sox6,absence |
R631 | T1029 | T1065 | themeOf | Sox6,expressed |
R632 | T1030 | T1065 | themeOf | ɛy globin,expressed |
R633 | T1030 | T1064 | themeOf | ɛy globin,absence |
test3
Id | Subject | Object | Predicate | Lexical cue |
---|---|---|---|---|
T1195 | 98-102 | Protein | denotes | Sox6 |
T1119 | 98-102 | Protein | denotes | Sox6 |
T1118 | 24-33 | Protein | denotes | ɛy globin |
T1117 | 18-22 | Protein | denotes | Sox6 |
T1194 | 49-58 | Gene_expression | denotes | expressed |
T1193 | 24-33 | Protein | denotes | ɛy globin |
T1192 | 18-22 | Protein | denotes | Sox6 |
R670 | T1192 | T1194 | themeOf | Sox6,expressed |
R671 | T1193 | T1194 | themeOf | ɛy globin,expressed |
R672 | T1193 | T1195 | themeOf | ɛy globin,Sox6 |