PMC:1359074 / 8312-8453
Annnotations
pmc-enju-pas
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bionlp-st-ge-2016-test-proteins
{"project":"bionlp-st-ge-2016-test-proteins","denotations":[{"id":"T1468","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T1467","span":{"begin":24,"end":33},"obj":"Protein"},{"id":"T1466","span":{"begin":18,"end":22},"obj":"Protein"}],"namespaces":[{"prefix":"_base","uri":"http://bionlp.dbcls.jp/ontology/ge.owl#"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
GO-BP
{"project":"GO-BP","denotations":[{"id":"T1287","span":{"begin":116,"end":141},"obj":"http://purl.obolibrary.org/obo/GO_0060318"},{"id":"T1284","span":{"begin":127,"end":141},"obj":"http://purl.obolibrary.org/obo/GO_0030218"},{"id":"T1276","span":{"begin":27,"end":33},"obj":"http://purl.obolibrary.org/obo/GO_0005344"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
GO-MF
{"project":"GO-MF","denotations":[{"id":"T1482","span":{"begin":27,"end":33},"obj":"http://purl.obolibrary.org/obo/GO_0005344"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
simple1
{"project":"simple1","denotations":[{"id":"T1695","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T1694","span":{"begin":24,"end":33},"obj":"Protein"},{"id":"T1693","span":{"begin":18,"end":22},"obj":"Protein"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
BioNLP16_DUT
{"project":"BioNLP16_DUT","denotations":[{"id":"T4299","span":{"begin":49,"end":58},"obj":"Gene_expression"},{"id":"T4298","span":{"begin":7,"end":14},"obj":"Negative_regulation"},{"id":"T4273","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T4272","span":{"begin":24,"end":33},"obj":"Protein"},{"id":"T4271","span":{"begin":18,"end":22},"obj":"Protein"}],"relations":[{"id":"R3056","pred":"themeOf","subj":"T4271","obj":"T4298"},{"id":"R3057","pred":"themeOf","subj":"T4272","obj":"T4299"},{"id":"R3058","pred":"themeOf","subj":"T4272","obj":"T4298"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
BioNLP16_Messiy
{"project":"BioNLP16_Messiy","denotations":[{"id":"T2737","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T2736","span":{"begin":24,"end":33},"obj":"Protein"},{"id":"T2735","span":{"begin":18,"end":22},"obj":"Protein"},{"id":"T2761","span":{"begin":7,"end":14},"obj":"Negative_regulation"}],"relations":[{"id":"R1847","pred":"themeOf","subj":"T2735","obj":"T2761"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
DLUT931
{"project":"DLUT931","denotations":[{"id":"T2844","span":{"begin":7,"end":14},"obj":"Negative_regulation"},{"id":"T2815","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T2814","span":{"begin":24,"end":33},"obj":"Protein"},{"id":"T2813","span":{"begin":18,"end":22},"obj":"Protein"}],"relations":[{"id":"R1881","pred":"themeOf","subj":"T2814","obj":"T2844"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
bionlp-st-ge-2016-test-ihmc
{"project":"bionlp-st-ge-2016-test-ihmc","denotations":[{"id":"T4101","span":{"begin":24,"end":33},"obj":"Protein"},{"id":"T4205","span":{"begin":0,"end":141},"obj":"Gene_expression"},{"id":"T4178","span":{"begin":15,"end":22},"obj":"Protein"},{"id":"T4159","span":{"begin":98,"end":102},"obj":"Protein"}],"relations":[{"id":"R3016","pred":"themeOf","subj":"T4101","obj":"T4205"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
bionlp-st-ge-2016-spacy-parsed
{"project":"bionlp-st-ge-2016-spacy-parsed","denotations":[{"id":"T3940","span":{"begin":127,"end":141},"obj":"NNS"},{"id":"T3939","span":{"begin":116,"end":126},"obj":"JJ"},{"id":"T3938","span":{"begin":113,"end":115},"obj":"IN"},{"id":"T3937","span":{"begin":103,"end":112},"obj":"NNS"},{"id":"T3936","span":{"begin":98,"end":102},"obj":"JJ"},{"id":"T3935","span":{"begin":93,"end":97},"obj":"IN"},{"id":"T3934","span":{"begin":79,"end":92},"obj":"VBG"},{"id":"T3933","span":{"begin":77,"end":78},"obj":","},{"id":"T3932","span":{"begin":72,"end":77},"obj":"NN"},{"id":"T3931","span":{"begin":66,"end":71},"obj":"JJ"},{"id":"T3930","span":{"begin":62,"end":65},"obj":"DT"},{"id":"T3929","span":{"begin":59,"end":61},"obj":"IN"},{"id":"T3928","span":{"begin":49,"end":58},"obj":"VBN"},{"id":"T3927","span":{"begin":37,"end":48},"obj":"RB"},{"id":"T3926","span":{"begin":34,"end":36},"obj":"VBZ"},{"id":"T3925","span":{"begin":27,"end":33},"obj":"NN"},{"id":"T3924","span":{"begin":24,"end":26},"obj":"JJ"},{"id":"T3923","span":{"begin":22,"end":23},"obj":","},{"id":"T3922","span":{"begin":18,"end":22},"obj":"NNP"},{"id":"T3921","span":{"begin":15,"end":17},"obj":"IN"},{"id":"T3920","span":{"begin":7,"end":14},"obj":"NN"},{"id":"T3919","span":{"begin":3,"end":6},"obj":"DT"},{"id":"T3918","span":{"begin":0,"end":2},"obj":"IN"}],"relations":[{"id":"R2891","pred":"prep","subj":"T3918","obj":"T3928"},{"id":"R2893","pred":"det","subj":"T3919","obj":"T3920"},{"id":"R2894","pred":"pobj","subj":"T3920","obj":"T3918"},{"id":"R2895","pred":"prep","subj":"T3921","obj":"T3920"},{"id":"R2897","pred":"pobj","subj":"T3922","obj":"T3921"},{"id":"R2898","pred":"punct","subj":"T3923","obj":"T3928"},{"id":"R2899","pred":"amod","subj":"T3924","obj":"T3925"},{"id":"R2901","pred":"nsubjpass","subj":"T3925","obj":"T3928"},{"id":"R2902","pred":"auxpass","subj":"T3926","obj":"T3928"},{"id":"R2904","pred":"advmod","subj":"T3927","obj":"T3928"},{"id":"R2905","pred":"ROOT","subj":"T3928","obj":"T3928"},{"id":"R2906","pred":"prep","subj":"T3929","obj":"T3928"},{"id":"R2908","pred":"det","subj":"T3930","obj":"T3932"},{"id":"R2909","pred":"amod","subj":"T3931","obj":"T3932"},{"id":"R2910","pred":"pobj","subj":"T3932","obj":"T3929"},{"id":"R2912","pred":"punct","subj":"T3933","obj":"T3928"},{"id":"R2913","pred":"advcl","subj":"T3934","obj":"T3928"},{"id":"R2914","pred":"dobj","subj":"T3935","obj":"T3934"},{"id":"R2916","pred":"amod","subj":"T3936","obj":"T3937"},{"id":"R2917","pred":"nsubj","subj":"T3937","obj":"T3935"},{"id":"R2919","pred":"prep","subj":"T3938","obj":"T3937"},{"id":"R2920","pred":"amod","subj":"T3939","obj":"T3940"},{"id":"R2921","pred":"pobj","subj":"T3940","obj":"T3938"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
bionlp-st-ge-2016-test-tees
{"project":"bionlp-st-ge-2016-test-tees","denotations":[{"id":"T1587","span":{"begin":7,"end":14},"obj":"Negative_regulation"},{"id":"T1586","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T1585","span":{"begin":24,"end":33},"obj":"Protein"},{"id":"T1584","span":{"begin":18,"end":22},"obj":"Protein"}],"relations":[{"id":"R799","pred":"themeOf","subj":"T1585","obj":"T1587"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
testone
{"project":"testone","denotations":[{"id":"T1065","span":{"begin":49,"end":58},"obj":"Gene_expression"},{"id":"T1064","span":{"begin":7,"end":14},"obj":"Negative_regulation"},{"id":"T1031","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T1030","span":{"begin":24,"end":33},"obj":"Protein"},{"id":"T1029","span":{"begin":18,"end":22},"obj":"Protein"}],"relations":[{"id":"R630","pred":"themeOf","subj":"T1029","obj":"T1064"},{"id":"R631","pred":"themeOf","subj":"T1029","obj":"T1065"},{"id":"R632","pred":"themeOf","subj":"T1030","obj":"T1065"},{"id":"R633","pred":"themeOf","subj":"T1030","obj":"T1064"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}
test3
{"project":"test3","denotations":[{"id":"T1195","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T1119","span":{"begin":98,"end":102},"obj":"Protein"},{"id":"T1118","span":{"begin":24,"end":33},"obj":"Protein"},{"id":"T1117","span":{"begin":18,"end":22},"obj":"Protein"},{"id":"T1194","span":{"begin":49,"end":58},"obj":"Gene_expression"},{"id":"T1193","span":{"begin":24,"end":33},"obj":"Protein"},{"id":"T1192","span":{"begin":18,"end":22},"obj":"Protein"}],"relations":[{"id":"R670","pred":"themeOf","subj":"T1192","obj":"T1194"},{"id":"R671","pred":"themeOf","subj":"T1193","obj":"T1194"},{"id":"R672","pred":"themeOf","subj":"T1193","obj":"T1195"}],"text":"In the absence of Sox6, ɛy globin is ectopically expressed in the fetal liver, demonstrating that Sox6 functions in definitive erythropoiesis"}